mRNA_H-akashiwo_Contig836.8.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig836.8.1
Unique NamemRNA_H-akashiwo_Contig836.8.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig836.8.1 vs. uniprot
Match: A0A379Z3W0_SERMA (Beta-galactosidase n=1 Tax=Serratia marcescens TaxID=615 RepID=A0A379Z3W0_SERMA)

HSP 1 Score: 191 bits (484), Expect = 3.620e-55
Identity = 103/227 (45.37%), Postives = 132/227 (58.15%), Query Frame = 1
Query:    1 RKKWEDPTVFGIGRVSAHTDLAAFPSLEEAAATNFNRAASSSLISLDGDWRFLYSPKGEKGLPLDFETAGLDDTMWDTIEVPSNWQMKGYGIPIYTNTVYPIPVDPPRVPKQNPMGIYRRAVDIPTGWLAGDAEIRLIFQGADSTLEVWVNGHWVGYSQDSRLP-ES*RGALPAAGSTRNGARVAQWSDATYLEDQDHWWLSGLHRSVELQRLPAAHLRDYRVATEL 678
            R+ W++P      R+ AH   A++ ++E+A     + A S+S  SL+G+WRF Y P+ E   P  +    L D     + VPSNWQ+ GY  PIYTN  YP PVDPPRVP+ NP G Y R  ++   WLA   + R+IF G +S   +W NGHWVGYSQDSRLP E   G     G  R    V +W D +YLEDQD W +SG+ R V L   PAAHL D R+ T L
Sbjct:   15 RRDWQNPACTHYRRLDAHPPFASWRTVEDAR----DDAPSASRRSLNGEWRFSYFPRPEAA-PESWLQQDLPDAA--PLAVPSNWQLAGYDAPIYTNVRYPFPVDPPRVPEDNPTGCYSRTFNVDPAWLAA-GQTRVIFDGVNSAFYLWCNGHWVGYSQDSRLPAEFDLGPWLQPGENRLAVMVLRWCDGSYLEDQDMWRMSGIFRDVSLLHKPAAHLSDVRITTPL 233          
BLAST of mRNA_H-akashiwo_Contig836.8.1 vs. uniprot
Match: A0A7V3I5K8_9BACT (Beta-galactosidase subunit alpha (Fragment) n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7V3I5K8_9BACT)

HSP 1 Score: 185 bits (470), Expect = 1.070e-54
Identity = 104/222 (46.85%), Postives = 126/222 (56.76%), Query Frame = 1
Query:   10 WEDPTVFGIGRVSAHTDLAAFPSLEEAAATNFNRAASSSLISLDGDWRFLYSPKGEKGLPLDFETAGLDDTMWDTIEVPSNWQMKGYGIPIYTNTVYPIPVDPPRVPKQNPMGIYRRAVDIPTGWLAGDAEIRLIFQGADSTLEVWVNGHWVGYSQDSRLP-ES*RGALPAAGSTRNGARVAQWSDATYLEDQDHWWLSGLHRSVELQRLPAAHLRDYRVAT 672
            WE+P +    R+ A   + ++P  + AAA  F+ A S  + SL+G W+F YSP   +  P  F   G D   WD IEVPS WQMKGYG P YTN +YP PVDPPR P  NP G Y R  +IP  W   D ++ L F G DS   VWVNG   G+S+ SR P E     L   G      RV QWSD +Y EDQD WWLSG+ R V L  +P A +RD RV T
Sbjct:    4 WENPELLHRNRLPARAYVFSYP--DTAAALTFDPAGSPWVQSLNGKWKFDYSPAPAEA-PERFYETGFDADDWDEIEVPSCWQMKGYGRPHYTNVLYPFPVDPPRAPTDNPTGSYLRKFNIPAIWK--DMQVILRFDGVDSAFHVWVNGKPAGFSKGSRTPAEFDITDLVEPGPNTIAVRVYQWSDGSYCEDQDMWWLSGIFRDVTLIAMPRAGIRDVRVQT 220          
BLAST of mRNA_H-akashiwo_Contig836.8.1 vs. uniprot
Match: UPI001A119298 (Uncharacterized protein n=1 Tax=Escherichia coli TaxID=562 RepID=UPI001A119298)

HSP 1 Score: 183 bits (465), Expect = 3.400e-54
Identity = 100/225 (44.44%), Postives = 128/225 (56.89%), Query Frame = 1
Query:    1 RKKWEDPTVFGIGRVSAHTDLAAFPSLEEAAATNFNRAASSSLISLDGDWRFLYSPKGEKGLPLDFETAGLDDTMWDTIEVPSNWQMKGYGIPIYTNTVYPIPVDPPRVPKQNPMGIYRRAVDIPTGWLAGDAEIRLIFQGADSTLEVWVNGHWVGYSQDSRLP-ES*RGALPAAGSTRNGARVAQWSDATYLEDQDHWWLSGLHRSVELQRLPAAHLRDYRVAT 672
            R+ WE+P V  + R++AH   A++ + EEA         S  L SL+G+WRF + P  E  +P  +    L D   DTI VPSNWQM GY  PIYTN  YPI V+PP VP +NP G Y    ++   WL  + + R+IF G +S   +W NG WVGY QDSRLP E    A   AG  R    V +WSD +YLEDQD W +SG+ R V L   P   + D+ VAT
Sbjct:   14 RRDWENPGVTQLNRLAAHPPFASWRNSEEARTDR----PSQQLRSLNGEWRFAWFPAPE-AVPESWLECDLPDA--DTIVVPSNWQMHGYDAPIYTNVTYPITVNPPFVPVENPTGCYSLTFNVDESWLQ-EGQTRIIFDGVNSAFHLWCNGRWVGYGQDSRLPSEFDLSAFLRAGENRLAVMVLRWSDGSYLEDQDMWRMSGIFRDVSLLHKPTTQISDFHVAT 230          
BLAST of mRNA_H-akashiwo_Contig836.8.1 vs. uniprot
Match: A0A7C3M5T3_9FIRM (Beta-galactosidase subunit alpha (Fragment) n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A7C3M5T3_9FIRM)

HSP 1 Score: 183 bits (464), Expect = 5.890e-54
Identity = 100/224 (44.64%), Postives = 125/224 (55.80%), Query Frame = 1
Query:   10 WEDPTVFGIGRVSAHTDLAAFPSLEEAAATNFNRAASSSLISLDGDWRFLYSPKGEKGLPLDFETAGLDDTMWDTIEVPSNWQMKGYGIPIYTNTVYPIPVDPPRVPKQNPMGIYRRAVDIPTGWLAGDAEIRLIFQGADSTLEVWVNGHWVGYSQDSRLP-ES*RGALPAAGSTRNGARVAQWSDATYLEDQDHWWLSGLHRSVELQRLPAAHLRDYRVATEL 678
            WE+  V    R+ +      +P ++ A    F R  S  +  L+G W+F Y P  ++  P DF     D + WD I VPSNWQM+GYG P YTN +YP PVDPPRVP +NP G YRR   I       D  + L F+G DS   VWVNG  VGYSQ SRLP E    +    G      RV QWSD +YLEDQD WWLSG+ R V L   P  ++RD+ + T+L
Sbjct:    8 WENLKVLQRNRLKSRAYFIPYPDVDSA--LTFQREISDRIKLLNGRWKFHYDPSPQEA-PRDFYREDYDVSSWDEIRVPSNWQMEGYGHPHYTNVMYPFPVDPPRVPSENPTGSYRREFHIDED--LKDKRVILRFEGVDSAFHVWVNGKEVGYSQGSRLPSEFDITSYVRPGKNILAVRVYQWSDGSYLEDQDMWWLSGIFRDVYLIIRPRVYIRDFFITTDL 226          
BLAST of mRNA_H-akashiwo_Contig836.8.1 vs. uniprot
Match: A0A455SCQ0_9CHLR (Beta-galactosidase n=2 Tax=Thermosporothrix TaxID=768650 RepID=A0A455SCQ0_9CHLR)

HSP 1 Score: 195 bits (495), Expect = 1.050e-53
Identity = 109/227 (48.02%), Postives = 130/227 (57.27%), Query Frame = 1
Query:    4 KKWEDPTVFGIGRVSAHTDLAAF-PSLEEAAATNFNRAASSSLISLDGDWRFLYSPKGEKGLPLDFETAGLDDTMWDTIEVPSNWQMKGYGIPIYTNTVYPIPVDPPRVPKQNPMGIYRRAVDIPTGWLAGDAEIRLIFQGADSTLEVWVNGHWVGYSQDSRLP-ES*RGALPAAGSTRNGARVAQWSDATYLEDQDHWWLSGLHRSVELQRLPAAHLRDYRVATEL 678
            + WE+  +    R+    D A F P  +E  A  ++R ASSS+  L+G W+F Y+   E   P  F  A  D   WD I VP  WQ++GYG P YTN VYP PVDPP VP +NP G YRR   IP  W     +IRL F+G DS   VWVNG  VGYSQ SRLP E     L A G      RV QWSD +Y+EDQD WWLSG+ R V L  +P  H+ DY V TEL
Sbjct:   10 RDWENLEILQRNRLP---DRAYFIPYQDERTALTYDRGASSSIRLLNGMWKFHYADAPEHA-PAGFFAANFDVAAWDEIAVPGCWQLQGYGRPHYTNVVYPFPVDPPHVPTENPTGSYRRTFTIPASWQG--QQIRLRFEGVDSAFHVWVNGKEVGYSQGSRLPSEFDITNLVAPGENSVSVRVYQWSDGSYIEDQDMWWLSGIFRDVYLIAMPPLHIEDYTVRTEL 230          
BLAST of mRNA_H-akashiwo_Contig836.8.1 vs. uniprot
Match: A0A4V6JL04_9ENTR (Beta-galactosidase n=2 Tax=Enterobacteriaceae TaxID=543 RepID=A0A4V6JL04_9ENTR)

HSP 1 Score: 181 bits (459), Expect = 2.800e-53
Identity = 100/225 (44.44%), Postives = 131/225 (58.22%), Query Frame = 1
Query:    1 RKKWEDPTVFGIGRVSAHTDLAAFPSLEEAAATNFNRAASSSLISLDGDWRFLYSPKGEKGLPLDFETAGLDDTMWDTIEVPSNWQMKGYGIPIYTNTVYPIPVDPPRVPKQNPMGIYRRAVDIPTGWLAGDAEIRLIFQGADSTLEVWVNGHWVGYSQDSRLP-ES*RGALPAAGSTRNGARVAQWSDATYLEDQDHWWLSGLHRSVELQRLPAAHLRDYRVAT 672
            R+ WE+P V  + R++AH   A++ + EEA     +R +  S  SL+G+WRF + P  E  +P  +    L D   DT+ VPSNWQM GY  PIYTN  YPI V+PP VP +NP G Y    +I   WL  + + R+IF G +S   +W NG WVGY QDSRLP E    A   AG  R    V +WSD +YLEDQD W +SG+ R V L   P+  + D+ VAT
Sbjct:   14 RRDWENPGVTQLNRLAAHPPFASWRNSEEA---RTDRPSQESR-SLNGEWRFAWFPAPE-AVPESWLERDLPDA--DTVIVPSNWQMHGYDAPIYTNVTYPIAVNPPYVPTENPTGCYSLTFNIDESWLQ-EGQTRIIFDGVNSAFHLWCNGRWVGYGQDSRLPSEFDLSAFLHAGENRLAVMVLRWSDGSYLEDQDMWRMSGIFRDVSLLHKPSTQISDFHVAT 230          
BLAST of mRNA_H-akashiwo_Contig836.8.1 vs. uniprot
Match: A0A365T5Y5_9EURY (Beta-galactosidase n=1 Tax=halophilic archaeon TaxID=29295 RepID=A0A365T5Y5_9EURY)

HSP 1 Score: 193 bits (491), Expect = 3.880e-53
Identity = 96/225 (42.67%), Postives = 130/225 (57.78%), Query Frame = 1
Query:    4 KKWEDPTVFGIGRVSAHTDLAAFPSLEEAAATNFNRAASSSLISLDGDWRFLYSPKGEKGLPLDFETAGLDDTMWDTIEVPSNWQMKGYGIPIYTNTVYPIPVDPPRVPKQNPMGIYRRAVDIPTGWLAGDAEIRLIFQGADSTLEVWVNGHWVGYSQDSRLPES*RGALPAA-GSTRNGARVAQWSDATYLEDQDHWWLSGLHRSVELQRLPAAHLRDYRVATE 675
            K W++P V G  R+  H  +  +P  ++++A + +R AS     L+GDW F Y        P +F     DD  WD IEVP +WQ++G+G P YT+T YP PVDPP VP +NP G+YRR   +PT W   D E+ L F+G DS   VW+NG W+G+S+ SRLP   R     + G      +V +WSD +YLEDQD WWLSG+ R V L   P  H  D  V ++
Sbjct:    3 KDWKNPRVTGRNRMRNHAYVLPYP--DQSSALSSSRVASPWFKLLNGDWAFSYISNPHNS-PQNFYAPSFDDADWDDIEVPQHWQLEGFGTPKYTDTAYPFPVDPPEVPTKNPTGLYRRTFQVPTSW--DDLEVILRFEGVDSAFSVWINGEWIGFSKGSRLPSEFRLTDEVSVGINTIAVKVIRWSDGSYLEDQDMWWLSGIFRDVSLYATPKIHAVDIDVQSK 222          
BLAST of mRNA_H-akashiwo_Contig836.8.1 vs. uniprot
Match: A0A7C5AGE8_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Lentisphaerae bacterium TaxID=1932692 RepID=A0A7C5AGE8_9BACT)

HSP 1 Score: 185 bits (469), Expect = 3.940e-53
Identity = 93/195 (47.69%), Postives = 117/195 (60.00%), Query Frame = 1
Query:  112 AASSSLISLDGDWRFLYSPKGEKGLPLDFETAGLDDTMWDTIEVPSNWQMKGYGIPIYTNTVYPIPVDPPRVPKQNPMGIYRRAVDIPTGWLAGDAEIRLIFQGADSTLEVWVNGHWVGYSQDSRLPES*RGALPAAGSTRNG------ARVAQWSDATYLEDQDHWWLSGLHRSVELQRLPAAHLRDYRVATEL 678
            A S  ++SL+G+WRF Y+      +P   E A  DD+ WD+I VP +WQ+ GYG P YTN  YP PVDPPRVP +NP G+YRR   +P  W   +  I L+FQG DS   +W+NG   G+S+ SRLP             R G      ARV QWSD +YLEDQD WWLSG+ R V L  +P  H+RD+ V TEL
Sbjct:   61 ATSPWVMSLNGEWRFHYAAT-PYDVPAGAEAAEYDDSAWDSIRVPMSWQLAGYGRPHYTNVAYPFPVDPPRVPDENPTGVYRRIFHVPGSW--ANMRIFLLFQGVDSAFHLWINGRPAGFSKGSRLPAE----FEITDLVRPGRDNALAARVYQWSDGSYLEDQDMWWLSGIFRDVHLVAMPRVHIRDFSVRTEL 248          
BLAST of mRNA_H-akashiwo_Contig836.8.1 vs. uniprot
Match: A0A376MRZ3_ECOLX (Beta-D-galactosidase n=4 Tax=Enterobacteriaceae TaxID=543 RepID=A0A376MRZ3_ECOLX)

HSP 1 Score: 183 bits (464), Expect = 4.500e-53
Identity = 99/225 (44.00%), Postives = 128/225 (56.89%), Query Frame = 1
Query:    1 RKKWEDPTVFGIGRVSAHTDLAAFPSLEEAAATNFNRAASSSLISLDGDWRFLYSPKGEKGLPLDFETAGLDDTMWDTIEVPSNWQMKGYGIPIYTNTVYPIPVDPPRVPKQNPMGIYRRAVDIPTGWLAGDAEIRLIFQGADSTLEVWVNGHWVGYSQDSRLP-ES*RGALPAAGSTRNGARVAQWSDATYLEDQDHWWLSGLHRSVELQRLPAAHLRDYRVAT 672
            R+ WE+P V  + R++AH   A++ + EEA         S  L SL+G+WRF + P  E  +P  +    L +   DT+ VPSNWQM GY  PIYTN  YPI V+PP VP +NP G Y    +I   WL  + + R+IF G +S   +W NG WVGY QDSRLP E    A   AG  R    V +WSD +YLEDQD W +SG+ R V L   P   + D+ VAT
Sbjct:   14 RRDWENPGVTQLNRLAAHPPFASWRNSEEARTAR----PSQQLRSLNGEWRFAWFPAPE-AVPESWLECDLPEA--DTVVVPSNWQMHGYDAPIYTNVTYPITVNPPFVPAENPTGCYSLTFNIDESWLQ-EGQTRIIFDGVNSAFHLWCNGRWVGYGQDSRLPSEFDLSAFLRAGKNRLAVMVVRWSDGSYLEDQDMWRMSGIFRDVSLLHKPTTQISDFHVAT 230          
BLAST of mRNA_H-akashiwo_Contig836.8.1 vs. uniprot
Match: A0A7C5BSH7_9BACT (Beta-galactosidase n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7C5BSH7_9BACT)

HSP 1 Score: 193 bits (490), Expect = 4.830e-53
Identity = 107/225 (47.56%), Postives = 128/225 (56.89%), Query Frame = 1
Query:   10 WEDPTVFGIGRVSAHTDLAAFPSLEEAAATNFNRAASSSLISLDGDWRFLYSPKGEKGLPLDFETAGLDDTMWDTIEVPSNWQMKGYGIPIYTNTVYPIPVDPPRVPKQNPMGIYRRAVDIPTGWLAGDAEIRLIFQGADSTLEVWVNGHWVGYSQDSRLPES*RGALPAAGSTRN--GARVAQWSDATYLEDQDHWWLSGLHRSVELQRLPAAHLRDYRVATEL 678
            WE+P +    R+ A      +P  E A    F+ AAS  + SL+G WRF YSP   +  P DF T G D T WD I+VPS WQM+GYG P YTN VYP PVDPPRVP +NP G Y R  D+PT W   D  I L F G DS    WVNG  VG+S+ SR+P        A  + +N    +V QWSD +Y EDQD WWLSG+ R V L   P   + D RV T L
Sbjct:    4 WENPQIIHKSRLPARAYTFGYPDAESA--KTFDPAASPWVKSLNGVWRFDYSPTPVEA-PKDFYTPGFDATAWDEIDVPSCWQMQGYGRPHYTNVVYPFPVDPPRVPTENPTGSYLRDFDVPTDW--ADKRIILRFDGVDSAFYAWVNGKQVGFSKGSRIPAE-FDVTDAVNTGKNTLAVQVYQWSDGSYCEDQDMWWLSGIFRDVTLIAKPKTGIWDVRVRTSL 222          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig836.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A379Z3W0_SERMA3.620e-5545.37Beta-galactosidase n=1 Tax=Serratia marcescens Tax... [more]
A0A7V3I5K8_9BACT1.070e-5446.85Beta-galactosidase subunit alpha (Fragment) n=1 Ta... [more]
UPI001A1192983.400e-5444.44Uncharacterized protein n=1 Tax=Escherichia coli T... [more]
A0A7C3M5T3_9FIRM5.890e-5444.64Beta-galactosidase subunit alpha (Fragment) n=1 Ta... [more]
A0A455SCQ0_9CHLR1.050e-5348.02Beta-galactosidase n=2 Tax=Thermosporothrix TaxID=... [more]
A0A4V6JL04_9ENTR2.800e-5344.44Beta-galactosidase n=2 Tax=Enterobacteriaceae TaxI... [more]
A0A365T5Y5_9EURY3.880e-5342.67Beta-galactosidase n=1 Tax=halophilic archaeon Tax... [more]
A0A7C5AGE8_9BACT3.940e-5347.69Uncharacterized protein (Fragment) n=1 Tax=Lentisp... [more]
A0A376MRZ3_ECOLX4.500e-5344.00Beta-D-galactosidase n=4 Tax=Enterobacteriaceae Ta... [more]
A0A7C5BSH7_9BACT4.830e-5347.56Beta-galactosidase n=1 Tax=Armatimonadetes bacteri... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig836contigH-akashiwo_Contig836:322013..322909 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1005994.GTGU_01307
Preferred namelacZ
PFAMsBgal_small_N,DUF4981,Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N
Model size678
Max annot lvl1236|Gammaproteobacteria
KEGG rclassRC00049,RC00452
KEGG koko:K01190
KEGG ReactionR01105,R01678,R03355,R04783,R06114
KEGG Pathwayko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004553,GO:0004565,GO:0005575,GO:0005975,GO:0005984,GO:0005988,GO:0005990,GO:0008150,GO:0008152,GO:0009056,GO:0009311,GO:0009313,GO:0009341,GO:0009987,GO:0015925,GO:0016052,GO:0016787,GO:0016798,GO:0032991,GO:0044237,GO:0044238,GO:0044248,GO:0044262,GO:0044275,GO:0046352,GO:0071704,GO:1901575,GO:1902494
Exons2
Evalue2.32e-30
EggNOG OGsCOG3250@1|root,COG3250@2|Bacteria,1MVBN@1224|Proteobacteria,1RMER@1236|Gammaproteobacteria
EC3.2.1.23
DescriptionBelongs to the glycosyl hydrolase 2 family
Cds size279
COG categoryG
BRITEko00000,ko00001,ko01000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681388004.7044687-UTR-H-akashiwo_Contig836:322012..3222341681388004.7044687-UTR-H-akashiwo_Contig836:322012..322234Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig836 322013..322234 +
1681388004.7375343-UTR-H-akashiwo_Contig836:322732..3229091681388004.7375343-UTR-H-akashiwo_Contig836:322732..322909Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig836 322733..322909 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681388004.7192047-CDS-H-akashiwo_Contig836:322234..3224531681388004.7192047-CDS-H-akashiwo_Contig836:322234..322453Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig836 322235..322453 +
1681388004.728516-CDS-H-akashiwo_Contig836:322672..3227321681388004.728516-CDS-H-akashiwo_Contig836:322672..322732Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig836 322673..322732 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig836.8.1prot_H-akashiwo_Contig836.8.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig836 322235..322732 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig836.8.1

>prot_H-akashiwo_Contig836.8.1 ID=prot_H-akashiwo_Contig836.8.1|Name=mRNA_H-akashiwo_Contig836.8.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=93bp
MWDTIEVPSNWQMKGYGIPIYTNTVYPIPVDPPRVPKQNPMGIYRRAVDI
PTGWLAGDAEIRLIFQGADSTLEVWVNGHWVGYSQDSRLPES*
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mRNA from alignment at H-akashiwo_Contig836:322013..322909+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig836.8.1 ID=mRNA_H-akashiwo_Contig836.8.1|Name=mRNA_H-akashiwo_Contig836.8.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=897bp|location=Sequence derived from alignment at H-akashiwo_Contig836:322013..322909+ (Heterosigma akashiwo CCMP452)
CGCAAAAAATGGGAGGATCCAACCGTTTTTGGCATTGGCCGTGTCAGTGC TCACACGGACCTTGCTGCATTCCCTTCACTCGAGGAGGCAGCCGCGACTA ACTTCAACCGTGCTGCGAGTTCCTCCCTAATTTCTCTCGATGGGGATTGG CGCTTCTTGTATTCCCCCAAAGGAGAAAAGGGCCTGCCCCTTGATTTTGA GACGGCTGGGCTTGACGACACCATGTGGGATACAATTGAGGTCCCTTCCA ATTGGCAGATGAAGGGCTATGGCATACCCATCTACACCAACACGGTGTAC CCCATACCAGTGGACCCACCACGTGTACCCAAGCAGAATCCAATGGGTAT CTATCGCCGGGCCGTGGACATACCCACCGGGTGGCTCGCTGGGGACGCAG AGATCCGGCTGATATTCCAGGGCGCAGATTCTACTCTGGAGGTGTGCATG GCCCCACCTTGGCCACCTTCTTCTCAGCACCATTTTTCTTTCTACCCTTC CCCCTCTCCCCCTCCCCCCTCCCCATCTCCAAACGCATTCACCTGACCTG ACGCTATGTACATTTACCGTGCTCCCAAGTGCAACGAGCAGTTTCATGCC GATGCTTGATACTGCTGCCACCTACCATCGTCCGCACGCTGCGCGCGCTT GCCGCCCCAGGTGTGGGTGAACGGGCACTGGGTCGGCTACAGCCAGGACA GCCGGCTGCCCGAAAGTTGACGCGGCGCCCTTCCTGCAGCGGGGTCAACG CGTAACGGCGCCAGGGTGGCCCAGTGGAGCGACGCCACCTACCTGGAGGA CCAGGACCACTGGTGGCTCTCCGGGCTGCACCGGTCGGTGGAGCTGCAGC GGCTGCCCGCCGCGCACCTgcGCGACTAccGCGTGGCCACGGAGCTG
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Coding sequence (CDS) from alignment at H-akashiwo_Contig836:322013..322909+

>mRNA_H-akashiwo_Contig836.8.1 ID=mRNA_H-akashiwo_Contig836.8.1|Name=mRNA_H-akashiwo_Contig836.8.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=279bp|location=Sequence derived from alignment at H-akashiwo_Contig836:322013..322909+ (Heterosigma akashiwo CCMP452)
ATGTGGGATACAATTGAGGTCCCTTCCAATTGGCAGATGAAGGGCTATGG
CATACCCATCTACACCAACACGGTGTACCCCATACCAGTGGACCCACCAC
GTGTACCCAAGCAGAATCCAATGGGTATCTATCGCCGGGCCGTGGACATA
CCCACCGGGTGGCTCGCTGGGGACGCAGAGATCCGGCTGATATTCCAGGG
CGCAGATTCTACTCTGGAGGTGTGGGTGAACGGGCACTGGGTCGGCTACA
GCCAGGACAGCCGGCTGCCCGAAAGTTGA
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