mRNA_H-akashiwo_Contig8.134.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig8.134.1 vs. uniprot
Match: A0A7S3XTW0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XTW0_HETAK) HSP 1 Score: 175 bits (444), Expect = 5.040e-51 Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 3 Query: 3 SMSITAAAVAWTGVITTAMNRFVETTALSRMSSVEASVILATEPLWAAFFAALLLHENFGVNDYVGGALIVLACLANTLKPSDFGQLFSKER 278 SMSITAAAVAWTGVITTAMNRFVETTALSRMSSVEASVILATEPLWAAFFAALLLHENFGVNDYVGGALIVLACLANTLKPSDFGQLFSKER Sbjct: 336 SMSITAAAVAWTGVITTAMNRFVETTALSRMSSVEASVILATEPLWAAFFAALLLHENFGVNDYVGGALIVLACLANTLKPSDFGQLFSKER 427
BLAST of mRNA_H-akashiwo_Contig8.134.1 vs. uniprot
Match: A0A7S2I276_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I276_9STRA) HSP 1 Score: 141 bits (355), Expect = 1.080e-37 Identity = 72/87 (82.76%), Postives = 78/87 (89.66%), Query Frame = 3 Query: 18 AAAVAWTGVITTAMNRFVETTALSRMSSVEASVILATEPLWAAFFAALLLHENFGVNDYVGGALIVLACLANTLKPSDFGQLFSKER 278 AAAVAWTG+ITTA+NRFVETTAL +MSS EASVILATEPLWAA FAALLL ENFGVNDYVGG LIVLACLANTL PSDFG+ F + + Sbjct: 361 AAAVAWTGLITTALNRFVETTALGKMSSAEASVILATEPLWAALFAALLLSENFGVNDYVGGFLIVLACLANTLNPSDFGRFFGQSQ 447
BLAST of mRNA_H-akashiwo_Contig8.134.1 vs. uniprot
Match: A0A6U0SYC7_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A6U0SYC7_9STRA) HSP 1 Score: 139 bits (350), Expect = 4.250e-37 Identity = 68/92 (73.91%), Postives = 81/92 (88.04%), Query Frame = 3 Query: 3 SMSITAAAVAWTGVITTAMNRFVETTALSRMSSVEASVILATEPLWAAFFAALLLHENFGVNDYVGGALIVLACLANTLKPSDFGQLFSKER 278 S+ I A AVAWTG++TTAMNRFVETTAL ++SS EASVILATEPLWAA FAA++L ENFG+NDYVGGALIVLACLAN LKPSDF ++ +++ Sbjct: 344 SLQIAAGAVAWTGLVTTAMNRFVETTALGKVSSAEASVILATEPLWAALFAAIILSENFGINDYVGGALIVLACLANALKPSDFDRILGEKK 435
BLAST of mRNA_H-akashiwo_Contig8.134.1 vs. uniprot
Match: A0A7S1UQJ2_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UQJ2_9STRA) HSP 1 Score: 127 bits (318), Expect = 3.210e-34 Identity = 64/88 (72.73%), Postives = 75/88 (85.23%), Query Frame = 3 Query: 3 SMSITAAAVAWTGVITTAMNRFVETTALSRMSSVEASVILATEPLWAAFFAALLLHENFGVNDYVGGALIVLACLANTLKPSDFGQLF 266 ++ + A AV WTGVITTA+NRFVET+AL +M+S EASVILATEPLWAA FAAL L E+FG+NDY+GGALIV ACLANTLKP+D LF Sbjct: 127 TLHMAAGAVLWTGVITTALNRFVETSALGKMASAEASVILATEPLWAALFAALWLGEDFGLNDYIGGALIVFACLANTLKPADLSFLF 214
BLAST of mRNA_H-akashiwo_Contig8.134.1 vs. uniprot
Match: A0A7S1H3K2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1H3K2_9STRA) HSP 1 Score: 117 bits (294), Expect = 1.240e-30 Identity = 58/79 (73.42%), Postives = 69/79 (87.34%), Query Frame = 3 Query: 3 SMSITAAAVAWTGVITTAMNRFVETTALSRMSSVEASVILATEPLWAAFFAALLLHENFGVNDYVGGALIVLACLANTL 239 S+ I A AVAWTG++TTAMNRF+ETT+L +++S EASV+LATEPLWAA FAALLL E FG NDYVGGA I++ACLANTL Sbjct: 132 SLRIAAGAVAWTGLVTTAMNRFIETTSLGKIASAEASVLLATEPLWAAIFAALLLGEKFGWNDYVGGAFIIMACLANTL 210
BLAST of mRNA_H-akashiwo_Contig8.134.1 vs. uniprot
Match: K0R0K3_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R0K3_THAOC) HSP 1 Score: 117 bits (292), Expect = 1.440e-28 Identity = 60/90 (66.67%), Postives = 69/90 (76.67%), Query Frame = 3 Query: 24 AVAWTGVITTAMNRFVETTALSRMSSVEASVILATEPLWAAFFAALLLHENFGVNDYVGGALIVLACLANTLKPSDFGQLFSKER*LKLR 293 AV WTG+ TTA+NRF+ETTAL +M S EASVILATEPLWA+ FAAL L E+FG NDYVGGALIVLACLA L+ DF + E +LR Sbjct: 375 AVLWTGIATTALNRFIETTALGKMKSAEASVILATEPLWASLFAALWLGEDFGANDYVGGALIVLACLATALRREDFAFVLGNEEKEQLR 464
BLAST of mRNA_H-akashiwo_Contig8.134.1 vs. uniprot
Match: A0A7S1H1U4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1H1U4_9STRA) HSP 1 Score: 106 bits (264), Expect = 1.320e-27 Identity = 51/68 (75.00%), Postives = 61/68 (89.71%), Query Frame = 3 Query: 36 TGVITTAMNRFVETTALSRMSSVEASVILATEPLWAAFFAALLLHENFGVNDYVGGALIVLACLANTL 239 TG++TTAMNRF+ETT+L +++S EASV+LATEPLWAA FAALLL E FG NDYVGGA I++ACLANTL Sbjct: 16 TGLVTTAMNRFIETTSLGKIASAEASVLLATEPLWAAIFAALLLGEKFGWNDYVGGAFIIMACLANTL 83
BLAST of mRNA_H-akashiwo_Contig8.134.1 vs. uniprot
Match: B8C9Z6_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C9Z6_THAPS) HSP 1 Score: 112 bits (280), Expect = 7.350e-27 Identity = 56/87 (64.37%), Postives = 67/87 (77.01%), Query Frame = 3 Query: 6 MSITAAAVAWTGVITTAMNRFVETTALSRMSSVEASVILATEPLWAAFFAALLLHENFGVNDYVGGALIVLACLANTLKPSDFGQLF 266 M A AVAWTGV++T+ N +E AL R+ S EASVILATEPLWA+ FAA+L HE FGV+DYVGG L++ ACL NTLKPSDF + F Sbjct: 366 MRTVALAVAWTGVLSTSTNFCIENCALGRVPSSEASVILATEPLWASLFAAILFHEEFGVSDYVGGVLMITACLVNTLKPSDFKRFF 452
BLAST of mRNA_H-akashiwo_Contig8.134.1 vs. uniprot
Match: A0A7S2LZI7_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LZI7_9STRA) HSP 1 Score: 104 bits (259), Expect = 6.030e-24 Identity = 55/88 (62.50%), Postives = 65/88 (73.86%), Query Frame = 3 Query: 3 SMSITAAAVAWTGVITTAMNRFVETTALSRMSSVEASVILATEPLWAAFFAALLLHENFGVNDYVGGALIVLACLANTLKPSDFGQLF 266 +M A AVAWTG+I+T+ N VE TAL R+ S EASVILATEPLWA+ FAAL L +FG NDY+GGALIV ACLA +L+ DF F Sbjct: 340 NMRTVAMAVAWTGIISTSTNFCVEITALGRVPSSEASVILATEPLWASLFAALWLSTDFGANDYIGGALIVAACLATSLQKDDFNGFF 427
BLAST of mRNA_H-akashiwo_Contig8.134.1 vs. uniprot
Match: A0A7S4MWI2_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MWI2_9STRA) HSP 1 Score: 102 bits (253), Expect = 5.470e-23 Identity = 52/91 (57.14%), Postives = 64/91 (70.33%), Query Frame = 3 Query: 3 SMSITAAAVAWTGVITTAMNRFVETTALSRMSSVEASVILATEPLWAAFFAALLLHENFGVNDYVGGALIVLACLANTLKPSDFGQLFSKE 275 S+ A A WTG+ITTA NR ETT L +MSS EA+V+LATEPLWAA FA+ L+HE+ G+ D VGGALIV ACL T++P LF + Sbjct: 375 SLRNVAIAAGWTGLITTAANRVGETTGLGKMSSSEAAVLLATEPLWAAVFASFLIHESMGIEDIVGGALIVGACLTTTIRPETLQNLFGMD 465 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig8.134.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig8.134.1 >prot_H-akashiwo_Contig8.134.1 ID=prot_H-akashiwo_Contig8.134.1|Name=mRNA_H-akashiwo_Contig8.134.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=92bp MSITAAAVAWTGVITTAMNRFVETTALSRMSSVEASVILATEPLWAAFFAback to top mRNA from alignment at H-akashiwo_Contig8:6059291..6059640+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig8.134.1 ID=mRNA_H-akashiwo_Contig8.134.1|Name=mRNA_H-akashiwo_Contig8.134.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=350bp|location=Sequence derived from alignment at H-akashiwo_Contig8:6059291..6059640+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig8:6059291..6059640+ >mRNA_H-akashiwo_Contig8.134.1 ID=mRNA_H-akashiwo_Contig8.134.1|Name=mRNA_H-akashiwo_Contig8.134.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=276bp|location=Sequence derived from alignment at H-akashiwo_Contig8:6059291..6059640+ (Heterosigma akashiwo CCMP452)back to top |