prot_H-akashiwo_Contig118.19.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-akashiwo_Contig118.19.1
Unique Name	prot_H-akashiwo_Contig118.19.1
Type	polypeptide
Organism	Heterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length	296

Homology

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BLAST of mRNA_H-akashiwo_Contig118.19.1 vs. uniprot
Match: UPI00053F30A2 (protein MRG1 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F30A2)

HSP 1 Score: 154 bits (390), Expect = 2.190e-41
Identity = 109/292 (37.33%), Postives = 161/292 (55.14%), Query Frame = 0

Query:    5 YEVGDTCVVKDGGKDYQAKVLKIEMKKGKNGKKIKQYFIHYLGWNSRWDKWVELKEITPIELKNPSKKKKARKSENLGAPASTNNSVKKVKTEESAASSVKSESVCGGEESSASGDDAKAKTNKPSVRPSLDGSKL-KIRMGLALKEQLASEWQRLSQAETENTLVPLPRSPTVNDILQQFVE--SRKLDITPSAFEDFAEGLREFFDEALPLRLLYKSERKQYDDMFGDPSGKKPSEVYGAEHFLRLFVVLGDCLNTSDVTDKKEKKDLQEKITGLLQFLLKHQDSFFLDM 293
            Y  G+  +   G + Y+AKV KIE +K     K  +YF+HYLGWN  WD+WV    +  I  +N  K+    K   LGA        K  K+  SA +  K   +   ++     + AK K  K   + S+   KL KI+M   LK+QL  +W+ +SQ   ++ LV LPRSP V+DIL++++E  +RK      +  +   GLR +FD+ALPL LLYK ER+QY +     +   PS VYGAEH LRLFV L + L   ++ ++   + LQ+K+   ++FL K+Q +FFL +
Sbjct:   33 YSEGEKVLAYHGPRIYEAKVQKIETRK-----KEWRYFVHYLGWNKNWDEWVSADRLMKITDENIQKQLALEKK--LGAD-------KHHKSGRSAQTKPKDAKL---DKEETKNNVAKGKKRKTDEKESISAEKLVKIQMPSTLKKQLVDDWEFVSQ---KDKLVKLPRSPNVDDILKKYLEYRTRKDGTMTDSIAEILNGLRCYFDKALPLMLLYKKERQQYHEAV--TNNVSPSTVYGAEHLLRLFVKLPELLAYVNMEEETMTR-LQQKLVDFIRFLQKNQSTFFLSV 301

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BLAST of mRNA_H-akashiwo_Contig118.19.1 vs. uniprot
Match: UPI000B78B1B0 (protein MRG1-like isoform X1 n=5 Tax=Chenopodium quinoa TaxID=63459 RepID=UPI000B78B1B0)

HSP 1 Score: 151 bits (382), Expect = 3.670e-40
Identity = 103/292 (35.27%), Postives = 161/292 (55.14%), Query Frame = 0

Query:    5 YEVGDTCVVKDGGKDYQAKVLKIEMKKGKNGKKIKQYFIHYLGWNSRWDKWVELKEITPIELKNPSKKKKARKSENLGAPASTNNSVKKVKTEESAASSVKSESVCGGEESSASGDDAKAKTNKPSVRPSLDGSKL-KIRMGLALKEQLASEWQRLSQAETENTLVPLPRSPTVNDILQQFVE--SRKLDITPSAFEDFAEGLREFFDEALPLRLLYKSERKQYDDMFGDPSGKKPSEVYGAEHFLRLFVVLGDCLNTSDVTDKKEKKDLQEKITGLLQFLLKHQDSFFLDM 293
            Y  G+  +   G + Y+AK+ K E++K     K  +YF+HYLGWN  WD+WV +  +  I  +N  K++   K +       +  S +  K + S  + V  E V          + AK K  K   + S    KL KI++   LK+QL  +W+ ++Q   ++ LV LPRSPTV+D+L++++E  +RK      +  +   GLR +FD+ALPL LLYK ER+QY +     +   PS VYGA+H LRLFV L + L   ++ ++   + LQ+K+   L+FL K+Q +FFL +
Sbjct:   34 YAEGEKVLAYHGPRIYEAKIQKAEIRK-----KEWRYFVHYLGWNKNWDEWVGMDRLMKITEENIQKQQALEKKQGADKHHRSGRSAQ-TKPKGSTDAKVDKEDV--------KSNVAKGKKRKGDEKDSASAEKLVKIQIPSPLKKQLVDDWEFVTQ---KDKLVKLPRSPTVDDVLKKYLEYRTRKDGTITDSIAEILNGLRCYFDKALPLMLLYKKERQQYHEAV--TNNASPSTVYGADHLLRLFVKLPELLAYVNMEEETMTR-LQQKLVDFLRFLQKNQSTFFLSV 305

[Close]

BLAST of mRNA_H-akashiwo_Contig118.19.1 vs. uniprot
Match: A0A803NFC0_CANSA (MRG domain-containing protein n=8 Tax=Cannabis sativa TaxID=3483 RepID=A0A803NFC0_CANSA)

HSP 1 Score: 151 bits (381), Expect = 4.790e-40
Identity = 101/293 (34.47%), Postives = 163/293 (55.63%), Query Frame = 0

Query:    5 YEVGDTCVVKDGGKDYQAKVLKIEMKKGKNGKKIKQYFIHYLGWNSRWDKWVELKEITPIELKNPSKKKKARKSENLGAPASTNNSVKKVKTEESAASSVKSESVCGGEESSASGDDAKAKTNKPSVRPSLDGSK----LKIRMGLALKEQLASEWQRLSQAETENTLVPLPRSPTVNDILQQFVE--SRKLDITPSAFEDFAEGLREFFDEALPLRLLYKSERKQYDDMFGDPSGKKPSEVYGAEHFLRLFVVLGDCLNTSDVTDKKEKKDLQEKITGLLQFLLKHQDSFFL 291
            Y  G+  +   G + Y+AKV K E+ K     K  ++F+HYLGWN  WD+WV    +  +  +N  K+++  K + +          K VK+  SA +  KS +    E+     +  K K  K       +G+     +KI++   L++QL  +W  ++Q   ++ LV LPRSPTV++IL ++++  S+K + T  +  +  +G+R +FD+ALP+ LLYK ERKQ+ D+  D     PS +YGAEH LRLFV L + L    + ++   + LQ+K+T  L+FL K+Q +FFL
Sbjct:   28 YTEGEKVLAYHGPRIYEAKVQKAELMK-----KEWKFFVHYLGWNKSWDEWVGADRLMKLTEENVLKQQELDKKQGVD---------KNVKSGRSAHTRPKSSADVKAEKEDTKTNVVKTKKRKTESVAEKEGASSEKSVKIQIPSTLRKQLVDDWDFVNQ---QDKLVKLPRSPTVDEILSKYLDYRSKKENTTSDSLAEILKGIRCYFDKALPVMLLYKKERKQFQDVVLDDMS--PSNIYGAEHLLRLFVKLPELLAYVSIEEETLTR-LQQKLTDFLKFLQKNQSTFFL 300

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BLAST of mRNA_H-akashiwo_Contig118.19.1 vs. uniprot
Match: A0A2P5AFP4_PARAD (MRG n=2 Tax=Cannabaceae TaxID=3481 RepID=A0A2P5AFP4_PARAD)

HSP 1 Score: 150 bits (378), Expect = 1.330e-39
Identity = 102/290 (35.17%), Postives = 167/290 (57.59%), Query Frame = 0

Query:    5 YEVGDTCVVKDGGKDYQAKVLKIEMKKGKNGKKIKQYFIHYLGWNSRWDKWVELKEITPIELKNPSKKKKARKSENLGAPASTNNSVKKVKTEESAASSVKSESVCGGEESSASGDDAKAKTNKPSVRPSLDGSKL-KIRMGLALKEQLASEWQRLSQAETENTLVPLPRSPTVNDILQQFVE--SRKLDITPSAFEDFAEGLREFFDEALPLRLLYKSERKQYDDMFGDPSGKKPSEVYGAEHFLRLFVVLGDCLNTSDVTDKKEKKDLQEKITGLLQFLLKHQDSFFL 291
            +  G+  +   G + Y+AKV K E++K     K  +YF+HYLGWN  WD+WV +  +     +N  K++   K + +     +  S +  K + SA   V+ E V   + ++A G   K K +  + + ++   KL K ++   LK+QL  +W+ ++Q   ++ LV LPRSPTV+DIL ++++  S+K ++T  +  +   G+R +FD+ALP+ LLYK ERKQ+ D+  D     PS VYGAEH LRLFV L + L   ++ ++   + LQ+K+   L+FL K+Q + FL
Sbjct:   28 FSEGEKVLAYHGPRIYEAKVQKAELRK-----KEWKYFVHYLGWNKNWDEWVGVDRLMKHTEENVVKQQALDKKQGVDKNPKSGRSAQ-TKPKSSADVKVEKEDV---KSNAAKG--KKRKNDSGAEKDNVSSDKLVKFQIPSTLKKQLVDDWEFVNQ---QDKLVKLPRSPTVDDILAKYLDYRSKKENMTSDSVAEILRGIRCYFDKALPVMLLYKKERKQFHDVVQDDVS--PSNVYGAEHLLRLFVKLPELLAYVNIEEETLTR-LQQKLIDFLKFLQKNQSTLFL 300

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BLAST of mRNA_H-akashiwo_Contig118.19.1 vs. uniprot
Match: A0A1Y1I2K4_KLENI (MRG domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I2K4_KLENI)

HSP 1 Score: 148 bits (374), Expect = 3.430e-39
Identity = 102/287 (35.54%), Postives = 152/287 (52.96%), Query Frame = 0

Query:    8 GDTCVVKDGGKDYQAKVLKIEMKKGKNGKKIKQYFIHYLGWNSRWDKWVELKEITPIELKNPSKKKKARKSENLGAPASTNNSVKKVKTEESAASSVKSESVCGGEESSASGDDAKAKTNKPSVRPSLDGSKLKIRMGLALKEQLASEWQRLSQAETENTLVPLPRSPTVNDILQQFVESRKLDI---TPSAFEDFAEGLREFFDEALPLRLLYKSERKQYDDMFGDPSGKKPSEVYGAEHFLRLFVVLGDCLNTSDVTDKKEKKDLQEKITGLLQFLLKHQDSFFL 291
            G+  +   G   Y+AK  K E +K     K  +Y++HYLGW+  WD+WV+ K +  I   N +K+KK  +       A+      KV + E      K           A  ++AK +  +  V         K+ +   LK+QL  +W+ +++    N LVPLPRSPTVNDILQ+++E+R       T  A  +  +GLR +FD+ALP  LLY  ER Q++D+  + S   PS +YGAEH LRLFV L + L  +++ ++     LQ K+   L+FL K+Q SFFL
Sbjct:   36 GEKVLAYHGPLIYEAKTQKAEFRK-----KEWRYYVHYLGWSKSWDEWVDTKRLLKITDANIAKQKKVHRE------AAEKRGKSKVGSSER-----KXXXXXXXXXXXADANEAKEEEPEQVV---------KLPLSSHLKKQLIDDWKHVTE---NNKLVPLPRSPTVNDILQKYLEARTKKASSETDDATGEVVDGLRSYFDKALPAMLLYSQERDQFNDVIPEESDISPSNIYGAEHLLRLFVKLPELLVYTNM-EEASMAQLQAKLIDFLKFLQKNQTSFFL 293

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BLAST of mRNA_H-akashiwo_Contig118.19.1 vs. uniprot
Match: A0A443NHP7_9MAGN (Protein MRG1 n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A443NHP7_9MAGN)

HSP 1 Score: 149 bits (375), Expect = 4.040e-39
Identity = 102/291 (35.05%), Postives = 157/291 (53.95%), Query Frame = 0

Query:    5 YEVGDTCVVKDGGKDYQAKVLKIEMKKGKNGKKIKQYFIHYLGWNSRWDKWVELKEITPIELKNPSKKKKARKSENLGAPASTNNSVKKVKTEESAASSVKSESVCG--GEESSASGDDAKAKTNKPSVRPSLDGSKLKIRMGLALKEQLASEWQRLSQAETENTLVPLPRSPTVNDILQQFV--ESRKLDITPSAFEDFAEGLREFFDEALPLRLLYKSERKQYDDMFGDPSGKKPSEVYGAEHFLRLFVVLGDCLNTSDVTDKKEKKDLQEKITGLLQFLLKHQDSFFL 291
            + VG+  +   G   Y AKV KIE    +      +Y++HYLGWN  WD+WV+   +  +  +N  K+K+  K  N  A  +       +K   S  ++V  E +    G      GD    + +  S +       +KI+  L LK+QLA +W+ ++Q      LV LPR+P V+ IL++++   S+K D+   + E+   G+R +FD+ALP+ LLYK ER+QYD+   D     PS VYGAEH LRLFV L + L   ++ +K+    LQ+K+   L+FL K+Q +FFL
Sbjct:   32 FSVGERVLAHHGPLLYGAKVKKIEYLDNQQ-----RYYVHYLGWNKNWDEWVDGDRLMKLTEENVQKQKELEK--NFSADKNPKLGRSPIKPRSSNDTNVDKEDLQNYVGRSKKRKGDYGIEEEDTGSTK-----MLMKIQFPLTLKKQLADDWEFVTQL---GKLVKLPRNPNVDGILKKYLAYRSKKNDMAAESVEEILNGMRNYFDKALPVMLLYKKERRQYDEAIVD--NVSPSAVYGAEHLLRLFVKLPELLAYVNM-EKEALSQLQQKLQDFLKFLQKNQSAFFL 304

[Close]

BLAST of mRNA_H-akashiwo_Contig118.19.1 vs. uniprot
Match: K7MM16_SOYBN (MRG domain-containing protein n=20 Tax=indigoferoid/millettioid clade TaxID=2233855 RepID=K7MM16_SOYBN)

HSP 1 Score: 147 bits (372), Expect = 1.040e-38
Identity = 101/293 (34.47%), Postives = 162/293 (55.29%), Query Frame = 0

Query:    5 YEVGDTCVVKDGGKDYQAKVLKIEMKKGKNGKKIKQYFIHYLGWNSRWDKWVELKEITPIELKNPSKKKKARKSENLGAPASTNNSVKKVKTEESAASSVKSESVCGGEESSASGDDAKAKTNKPSV---RPSLDGSKL-KIRMGLALKEQLASEWQRLSQAETENTLVPLPRSPTVNDILQQFVE--SRKLDITPSAFEDFAEGLREFFDEALPLRLLYKSERKQYDDMFGDPSGKKPSEVYGAEHFLRLFVVLGDCLNTSDVTDKKEKKDLQEKITGLLQFLLKHQDSFFL 291
            Y  G+  +   G + Y+AKV K E++K +      +YF+HYLGW+  WD+WV  + +     +N  K++   K +N+          K VK+  S+    K  +    ++     + +K K  K      + S    KL KI++   LK+QL  +W  ++Q   ++ LV LPRSPTV++I+ +++E  S+K  + P +  +  +G+R +FD+ALP+ LLYK ERKQY+D   D     PS +YGAEH LRLFV L + L    + ++   + LQ+K+   L+FL K+Q +FFL
Sbjct:   29 YSEGEKVLAYHGPRIYEAKVQKTEIRKSEW-----KYFVHYLGWSKNWDEWVGEERLMKHTEENVLKQQALDKKQNVD---------KNVKSGRSSQGKAKISTDAKMDKEDVKNNVSKGKKRKHDAGVEKGSGTVEKLVKIQIPATLKKQLVDDWDSVTQ---QDKLVKLPRSPTVDEIMTKYLEYKSKKDGVAPDSIGEILKGIRCYFDKALPMMLLYKKERKQYNDSIVD--NVSPSTIYGAEHLLRLFVKLPELLAYVTIEEETLNR-LQQKLLDFLKFLQKNQSTFFL 301

[Close]

BLAST of mRNA_H-akashiwo_Contig118.19.1 vs. uniprot
Match: A0A2P6RNS4_ROSCH (Putative chromatin remodeling & transcriptional activation CHROMO-DOMAIN family n=2 Tax=Rosoideae TaxID=171638 RepID=A0A2P6RNS4_ROSCH)

HSP 1 Score: 146 bits (369), Expect = 2.880e-38
Identity = 104/293 (35.49%), Postives = 159/293 (54.27%), Query Frame = 0

Query:    5 YEVGDTCVVKDGGKDYQAKVLKIEMKKGKNGKKIKQYFIHYLGWNSRWDKWVELKEITPIELKNPSKKKKARKSENLGAPASTNNSVKKVKTEESAASSVKSESVCGGEESSASGDDAKAKTNKPSVRPSLDGSKL----KIRMGLALKEQLASEWQRLSQAETENTLVPLPRSPTVNDILQQFVESR--KLDITPSAFEDFAEGLREFFDEALPLRLLYKSERKQYDDMFGDPSGKKPSEVYGAEHFLRLFVVLGDCLNTSDVTDKKEKKDLQEKITGLLQFLLKHQDSFFL 291
            Y  G+  +   G + Y+AKV K E++K +      +YF+HYLGWN  WD+WV +  I     +N  K++   K + +          K  K+  SA +  KS +    E+     + AK K  K       D   L    KI++ LAL++QL  +W+ + +   ++ LV LPRSPTV+DILQ++++ R  K         +  +G+R +FD+ALP+ LLYK ERKQY D   D     PS +YGAEH LRLFV L + L   ++ ++   + LQ+++   L+FL K+Q +FFL
Sbjct:   29 YSEGEKILAYHGPRIYEAKVQKAEIRKNEW-----RYFVHYLGWNKNWDEWVGVDRILKYTEENILKQQALDKKQGVD---------KNTKSGRSAHTKPKSSADAKVEKEDQKNNVAKGKKRKNDSGAEKDSVTLEKLVKIQIPLALRKQLVEDWEFVCE---QDKLVKLPRSPTVDDILQKYLDYRTKKDGKLTDPVGEVLKGIRCYFDKALPMILLYKKERKQYHDTIVDDVS--PSTIYGAEHLLRLFVKLPELLAYVNIEEETLTR-LQQQLLDFLKFLQKNQTTFFL 301

[Close]

BLAST of mRNA_H-akashiwo_Contig118.19.1 vs. uniprot
Match: UPI001CC7B887 (protein MRG1-like isoform X2 n=7 Tax=Proteaceae TaxID=4328 RepID=UPI001CC7B887)

HSP 1 Score: 145 bits (366), Expect = 8.330e-38
Identity = 103/298 (34.56%), Postives = 167/298 (56.04%), Query Frame = 0

Query:    5 YEVGDTCVVKDGGKDYQAKVLKIEMKKGKNGKKIKQYFIHYLGWNSRWDKWVELKEITPIELKNPSKKKKARKS----ENLGAPASTNNSVKKVKTEESAASSVKSESVC-----GGEESSASGDDAKAKTNKPSVRPSLDGSKLKIRMGLALKEQLASEWQRLSQAETENTLVPLPRSPTVNDILQQFVE--SRKLDITPSAFEDFAEGLREFFDEALPLRLLYKSERKQYDDMFGDPSGKKPSEVYGAEHFLRLFVVLGDCLNTSDVTDKKEKKDLQEKITGLLQFLLKHQDSFFL 291
            +  G+  +   G + Y+AKVLK+E +K     K  +Y++HYLGW+  WD+WV +  +     +N  K+K   K     ++L A  ST     ++K + SA + V  E +      G +  S SG + K   +   +        +KI++   LK+QL  +W+ ++Q      LV LPRSP V+DIL+++++  S+K  +   +  +  +GLR +FD+ALP+ LLYK ER+QYD+   D     PS VYGAEH LRLFV L + L  +++ ++   + LQ+K+   L+F+ K+Q +FFL
Sbjct:   31 FSEGEKVLAFHGPRLYEAKVLKVEFRK-----KEWRYYVHYLGWSKNWDEWVGVDRLRKFTEENVRKQKDLEKKLSADKSLKAGRST-----QIKPKGSADAKVDKEDLRNYVARGKKRKSDSGIEEKDIESMEKL--------VKIQIPSTLKKQLVDDWEFVTQL---GKLVKLPRSPCVDDILKKYLDYKSKKDGMVADSIGEILKGLRCYFDKALPVMLLYKKERQQYDEAIAD--NVSPSTVYGAEHLLRLFVKLPELLTYANIEEETLMR-LQQKLLEFLKFMQKNQSTFFL 304

[Close]

BLAST of mRNA_H-akashiwo_Contig118.19.1 vs. uniprot
Match: UPI000B8C92D4 (protein MRG1 n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8C92D4)

HSP 1 Score: 147 bits (371), Expect = 9.230e-38
Identity = 104/293 (35.49%), Postives = 164/293 (55.97%), Query Frame = 0

Query:    5 YEVGDTCVVKDGGKDYQAKVLKIEMKKGKNGKKIKQYFIHYLGWNSRWDKWVELKEITPIELKNPSKKKKARKSENLGAPASTNNSVKKVKTEESAASSVKSESVCGGEESSASGDDAKAKTNKPSV---RPSLDGSKL-KIRMGLALKEQLASEWQRLSQAETENTLVPLPRSPTVNDILQQFVESR--KLDITPSAFEDFAEGLREFFDEALPLRLLYKSERKQYDDMFGDPSGKKPSEVYGAEHFLRLFVVLGDCLNTSDVTDKKEKKDLQEKITGLLQFLLKHQDSFFL 291
            +  G+  +   G + Y+AKV K E++K     K  +YF+HYLGWN  WD+WV    +     +N  K++   K   LG   S+       K+  SA +  KS +    ++     + AK K  K      + +L   KL KI++   LK+QL  +W+ ++Q   ++ LV LPRSP+++DIL +++E R  K  +   +  +  +G+R +FD+ALP+ LLYK ER+QY +  GD     PS VYGAEH LRLFV L + L   ++ ++   + LQ+K+  LL+FL K+Q +FF+
Sbjct:  116 FSEGERVLAYHGPRVYEAKVQKAELRK-----KEWKYFVHYLGWNKNWDEWVSADRLMKHNEENIMKQQALEKK--LGVDKSS-------KSARSAQAKAKSSTDAKVDKEDLKSNVAKGKKRKVESGIEKDNLSVEKLVKIQIPSTLKKQLVDDWEFVTQ---QDKLVKLPRSPSIDDILTKYLEYRTKKDGMVADSIGEILKGIRCYFDKALPVILLYKKERQQYQETVGDDVS--PSTVYGAEHLLRLFVKLPELLAYVNIEEETLTR-LQQKLLDLLKFLQKNQSTFFV 388

The following BLAST results are available for this feature:

BLAST of mRNA_H-akashiwo_Contig118.19.1 vs. uniprot

BLAST of mRNA_H-akashiwo_Contig118.19.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
UPI00053F30A2	2.190e-41	37.33	protein MRG1 n=1 Tax=Beta vulgaris subsp. vulgaris...	[more]
UPI000B78B1B0	3.670e-40	35.27	protein MRG1-like isoform X1 n=5 Tax=Chenopodium q...	[more]
A0A803NFC0_CANSA	4.790e-40	34.47	MRG domain-containing protein n=8 Tax=Cannabis sat...	[more]
A0A2P5AFP4_PARAD	1.330e-39	35.17	MRG n=2 Tax=Cannabaceae TaxID=3481 RepID=A0A2P5AFP...	[more]
A0A1Y1I2K4_KLENI	3.430e-39	35.54	MRG domain-containing protein n=1 Tax=Klebsormidiu...	[more]
A0A443NHP7_9MAGN	4.040e-39	35.05	Protein MRG1 n=1 Tax=Cinnamomum micranthum f. kane...	[more]
K7MM16_SOYBN	1.040e-38	34.47	MRG domain-containing protein n=20 Tax=indigoferoi...	[more]
A0A2P6RNS4_ROSCH	2.880e-38	35.49	Putative chromatin remodeling & transcriptional ac...	[more]
UPI001CC7B887	8.330e-38	34.56	protein MRG1-like isoform X2 n=7 Tax=Proteaceae Ta...	[more]
UPI000B8C92D4	9.230e-38	35.49	protein MRG1 n=1 Tax=Carica papaya TaxID=3649 RepI...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000953	Chromo/chromo shadow domain	SMART	SM00298	chromo_7	coord: 19..74 e-value: 0.0071 score: 25.6
None	No IPR available	GENE3D	2.30.30.140		coord: 1..97 e-value: 5.7E-19 score: 69.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..113
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..136
IPR008676	MRG	PIRSF	PIRSF038133	EAF3_MRG15	coord: 1..294 e-value: 6.4E-62 score: 207.1
IPR008676	MRG	PANTHER	PTHR10880	MORTALITY FACTOR 4-LIKE PROTEIN	coord: 4..291
IPR025995	RNA binding activity-knot of a chromodomain	PFAM	PF11717	Tudor-knot	coord: 6..61 e-value: 3.0E-12 score: 46.2
IPR038217	MRG, C-terminal domain superfamily	GENE3D	1.10.274.30	MRG domain	coord: 137..294 e-value: 1.3E-37 score: 130.9
IPR026541	MRG domain	PFAM	PF05712	MRG	coord: 139..291 e-value: 1.4E-30 score: 106.1
IPR026541	MRG domain	PROSITE	PS51640	MRG	coord: 136..295 score: 43.463272
IPR016197	Chromo-like domain superfamily	SUPERFAMILY	54160	Chromo domain-like	coord: 3..79

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-akashiwo_Contig118	contig	H-akashiwo_Contig118:654005..654892 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Heterosigma akashiwo CCMP452 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-akashiwo_Contig118.19.1	mRNA_H-akashiwo_Contig118.19.1	Heterosigma akashiwo CCMP452	mRNA	H-akashiwo_Contig118 654005..654892 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-akashiwo_Contig118.19.1 ID=prot_H-akashiwo_Contig118.19.1|Name=mRNA_H-akashiwo_Contig118.19.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=296bp
MQTDYEVGDTCVVKDGGKDYQAKVLKIEMKKGKNGKKIKQYFIHYLGWNS
RWDKWVELKEITPIELKNPSKKKKARKSENLGAPASTNNSVKKVKTEESA
ASSVKSESVCGGEESSASGDDAKAKTNKPSVRPSLDGSKLKIRMGLALKE
QLASEWQRLSQAETENTLVPLPRSPTVNDILQQFVESRKLDITPSAFEDF
AEGLREFFDEALPLRLLYKSERKQYDDMFGDPSGKKPSEVYGAEHFLRLF
VVLGDCLNTSDVTDKKEKKDLQEKITGLLQFLLKHQDSFFLDMDP*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000953	Chromo/chromo_shadow_dom
IPR008676	MRG
IPR025995	Tudor-knot
IPR038217	MRG_C_sf
IPR026541	MRG_dom
IPR016197	Chromo-like_dom_sf