mRNA_H-akashiwo_Contig118.19.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig118.19.1 vs. uniprot
Match: UPI00053F30A2 (protein MRG1 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F30A2) HSP 1 Score: 154 bits (390), Expect = 2.190e-41 Identity = 109/292 (37.33%), Postives = 161/292 (55.14%), Query Frame = 1
Query: 13 YEVGDTCVVKDGGKDYQAKVLKIEMKKGKNGKKIKQYFIHYLGWNSRWDKWVELKEITPIELKNPSKKKKARKSENLGAPASTNNSVKKVKTEESAASSVKSESVCGGEESSASGDDAKAKTNKPSVRPSLDGSKL-KIRMGLALKEQLASEWQRLSQAETENTLVPLPRSPTVNDILQQFVE--SRKLDITPSAFEDFAEGLREFFDEALPLRLLYKSERKQYDDMFGDPSGKKPSEVYGAEHFLRLFVVLGDCLNTSDVTDKKEKKDLQEKITGLLQFLLKHQDSFFLDM 879
Y G+ + G + Y+AKV KIE +K K +YF+HYLGWN WD+WV + I +N K+ K LGA K K+ SA + K + ++ + AK K K + S+ KL KI+M LK+QL +W+ +SQ ++ LV LPRSP V+DIL++++E +RK + + GLR +FD+ALPL LLYK ER+QY + + PS VYGAEH LRLFV L + L ++ ++ + LQ+K+ ++FL K+Q +FFL +
Sbjct: 33 YSEGEKVLAYHGPRIYEAKVQKIETRK-----KEWRYFVHYLGWNKNWDEWVSADRLMKITDENIQKQLALEKK--LGAD-------KHHKSGRSAQTKPKDAKL---DKEETKNNVAKGKKRKTDEKESISAEKLVKIQMPSTLKKQLVDDWEFVSQ---KDKLVKLPRSPNVDDILKKYLEYRTRKDGTMTDSIAEILNGLRCYFDKALPLMLLYKKERQQYHEAV--TNNVSPSTVYGAEHLLRLFVKLPELLAYVNMEEETMTR-LQQKLVDFIRFLQKNQSTFFLSV 301
BLAST of mRNA_H-akashiwo_Contig118.19.1 vs. uniprot
Match: UPI000B78B1B0 (protein MRG1-like isoform X1 n=5 Tax=Chenopodium quinoa TaxID=63459 RepID=UPI000B78B1B0) HSP 1 Score: 151 bits (382), Expect = 3.670e-40 Identity = 103/292 (35.27%), Postives = 161/292 (55.14%), Query Frame = 1
Query: 13 YEVGDTCVVKDGGKDYQAKVLKIEMKKGKNGKKIKQYFIHYLGWNSRWDKWVELKEITPIELKNPSKKKKARKSENLGAPASTNNSVKKVKTEESAASSVKSESVCGGEESSASGDDAKAKTNKPSVRPSLDGSKL-KIRMGLALKEQLASEWQRLSQAETENTLVPLPRSPTVNDILQQFVE--SRKLDITPSAFEDFAEGLREFFDEALPLRLLYKSERKQYDDMFGDPSGKKPSEVYGAEHFLRLFVVLGDCLNTSDVTDKKEKKDLQEKITGLLQFLLKHQDSFFLDM 879
Y G+ + G + Y+AK+ K E++K K +YF+HYLGWN WD+WV + + I +N K++ K + + S + K + S + V E V + AK K K + S KL KI++ LK+QL +W+ ++Q ++ LV LPRSPTV+D+L++++E +RK + + GLR +FD+ALPL LLYK ER+QY + + PS VYGA+H LRLFV L + L ++ ++ + LQ+K+ L+FL K+Q +FFL +
Sbjct: 34 YAEGEKVLAYHGPRIYEAKIQKAEIRK-----KEWRYFVHYLGWNKNWDEWVGMDRLMKITEENIQKQQALEKKQGADKHHRSGRSAQ-TKPKGSTDAKVDKEDV--------KSNVAKGKKRKGDEKDSASAEKLVKIQIPSPLKKQLVDDWEFVTQ---KDKLVKLPRSPTVDDVLKKYLEYRTRKDGTITDSIAEILNGLRCYFDKALPLMLLYKKERQQYHEAV--TNNASPSTVYGADHLLRLFVKLPELLAYVNMEEETMTR-LQQKLVDFLRFLQKNQSTFFLSV 305
BLAST of mRNA_H-akashiwo_Contig118.19.1 vs. uniprot
Match: A0A803NFC0_CANSA (MRG domain-containing protein n=8 Tax=Cannabis sativa TaxID=3483 RepID=A0A803NFC0_CANSA) HSP 1 Score: 151 bits (381), Expect = 4.790e-40 Identity = 101/293 (34.47%), Postives = 163/293 (55.63%), Query Frame = 1
Query: 13 YEVGDTCVVKDGGKDYQAKVLKIEMKKGKNGKKIKQYFIHYLGWNSRWDKWVELKEITPIELKNPSKKKKARKSENLGAPASTNNSVKKVKTEESAASSVKSESVCGGEESSASGDDAKAKTNKPSVRPSLDGSK----LKIRMGLALKEQLASEWQRLSQAETENTLVPLPRSPTVNDILQQFVE--SRKLDITPSAFEDFAEGLREFFDEALPLRLLYKSERKQYDDMFGDPSGKKPSEVYGAEHFLRLFVVLGDCLNTSDVTDKKEKKDLQEKITGLLQFLLKHQDSFFL 873
Y G+ + G + Y+AKV K E+ K K ++F+HYLGWN WD+WV + + +N K+++ K + + K VK+ SA + KS + E+ + K K K +G+ +KI++ L++QL +W ++Q ++ LV LPRSPTV++IL ++++ S+K + T + + +G+R +FD+ALP+ LLYK ERKQ+ D+ D PS +YGAEH LRLFV L + L + ++ + LQ+K+T L+FL K+Q +FFL
Sbjct: 28 YTEGEKVLAYHGPRIYEAKVQKAELMK-----KEWKFFVHYLGWNKSWDEWVGADRLMKLTEENVLKQQELDKKQGVD---------KNVKSGRSAHTRPKSSADVKAEKEDTKTNVVKTKKRKTESVAEKEGASSEKSVKIQIPSTLRKQLVDDWDFVNQ---QDKLVKLPRSPTVDEILSKYLDYRSKKENTTSDSLAEILKGIRCYFDKALPVMLLYKKERKQFQDVVLDDMS--PSNIYGAEHLLRLFVKLPELLAYVSIEEETLTR-LQQKLTDFLKFLQKNQSTFFL 300
BLAST of mRNA_H-akashiwo_Contig118.19.1 vs. uniprot
Match: A0A2P5AFP4_PARAD (MRG n=2 Tax=Cannabaceae TaxID=3481 RepID=A0A2P5AFP4_PARAD) HSP 1 Score: 150 bits (378), Expect = 1.330e-39 Identity = 102/290 (35.17%), Postives = 167/290 (57.59%), Query Frame = 1
Query: 13 YEVGDTCVVKDGGKDYQAKVLKIEMKKGKNGKKIKQYFIHYLGWNSRWDKWVELKEITPIELKNPSKKKKARKSENLGAPASTNNSVKKVKTEESAASSVKSESVCGGEESSASGDDAKAKTNKPSVRPSLDGSKL-KIRMGLALKEQLASEWQRLSQAETENTLVPLPRSPTVNDILQQFVE--SRKLDITPSAFEDFAEGLREFFDEALPLRLLYKSERKQYDDMFGDPSGKKPSEVYGAEHFLRLFVVLGDCLNTSDVTDKKEKKDLQEKITGLLQFLLKHQDSFFL 873
+ G+ + G + Y+AKV K E++K K +YF+HYLGWN WD+WV + + +N K++ K + + + S + K + SA V+ E V + ++A G K K + + + ++ KL K ++ LK+QL +W+ ++Q ++ LV LPRSPTV+DIL ++++ S+K ++T + + G+R +FD+ALP+ LLYK ERKQ+ D+ D PS VYGAEH LRLFV L + L ++ ++ + LQ+K+ L+FL K+Q + FL
Sbjct: 28 FSEGEKVLAYHGPRIYEAKVQKAELRK-----KEWKYFVHYLGWNKNWDEWVGVDRLMKHTEENVVKQQALDKKQGVDKNPKSGRSAQ-TKPKSSADVKVEKEDV---KSNAAKG--KKRKNDSGAEKDNVSSDKLVKFQIPSTLKKQLVDDWEFVNQ---QDKLVKLPRSPTVDDILAKYLDYRSKKENMTSDSVAEILRGIRCYFDKALPVMLLYKKERKQFHDVVQDDVS--PSNVYGAEHLLRLFVKLPELLAYVNIEEETLTR-LQQKLIDFLKFLQKNQSTLFL 300
BLAST of mRNA_H-akashiwo_Contig118.19.1 vs. uniprot
Match: A0A1Y1I2K4_KLENI (MRG domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I2K4_KLENI) HSP 1 Score: 148 bits (374), Expect = 3.430e-39 Identity = 102/287 (35.54%), Postives = 152/287 (52.96%), Query Frame = 1
Query: 22 GDTCVVKDGGKDYQAKVLKIEMKKGKNGKKIKQYFIHYLGWNSRWDKWVELKEITPIELKNPSKKKKARKSENLGAPASTNNSVKKVKTEESAASSVKSESVCGGEESSASGDDAKAKTNKPSVRPSLDGSKLKIRMGLALKEQLASEWQRLSQAETENTLVPLPRSPTVNDILQQFVESRKLDI---TPSAFEDFAEGLREFFDEALPLRLLYKSERKQYDDMFGDPSGKKPSEVYGAEHFLRLFVVLGDCLNTSDVTDKKEKKDLQEKITGLLQFLLKHQDSFFL 873
G+ + G Y+AK K E +K K +Y++HYLGW+ WD+WV+ K + I N +K+KK + A+ KV + E K A ++AK + + V K+ + LK+QL +W+ +++ N LVPLPRSPTVNDILQ+++E+R T A + +GLR +FD+ALP LLY ER Q++D+ + S PS +YGAEH LRLFV L + L +++ ++ LQ K+ L+FL K+Q SFFL
Sbjct: 36 GEKVLAYHGPLIYEAKTQKAEFRK-----KEWRYYVHYLGWSKSWDEWVDTKRLLKITDANIAKQKKVHRE------AAEKRGKSKVGSSER-----KXXXXXXXXXXXADANEAKEEEPEQVV---------KLPLSSHLKKQLIDDWKHVTE---NNKLVPLPRSPTVNDILQKYLEARTKKASSETDDATGEVVDGLRSYFDKALPAMLLYSQERDQFNDVIPEESDISPSNIYGAEHLLRLFVKLPELLVYTNM-EEASMAQLQAKLIDFLKFLQKNQTSFFL 293
BLAST of mRNA_H-akashiwo_Contig118.19.1 vs. uniprot
Match: A0A443NHP7_9MAGN (Protein MRG1 n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A443NHP7_9MAGN) HSP 1 Score: 149 bits (375), Expect = 4.040e-39 Identity = 102/291 (35.05%), Postives = 157/291 (53.95%), Query Frame = 1
Query: 13 YEVGDTCVVKDGGKDYQAKVLKIEMKKGKNGKKIKQYFIHYLGWNSRWDKWVELKEITPIELKNPSKKKKARKSENLGAPASTNNSVKKVKTEESAASSVKSESVCG--GEESSASGDDAKAKTNKPSVRPSLDGSKLKIRMGLALKEQLASEWQRLSQAETENTLVPLPRSPTVNDILQQFV--ESRKLDITPSAFEDFAEGLREFFDEALPLRLLYKSERKQYDDMFGDPSGKKPSEVYGAEHFLRLFVVLGDCLNTSDVTDKKEKKDLQEKITGLLQFLLKHQDSFFL 873
+ VG+ + G Y AKV KIE + +Y++HYLGWN WD+WV+ + + +N K+K+ K N A + +K S ++V E + G GD + + S + +KI+ L LK+QLA +W+ ++Q LV LPR+P V+ IL++++ S+K D+ + E+ G+R +FD+ALP+ LLYK ER+QYD+ D PS VYGAEH LRLFV L + L ++ +K+ LQ+K+ L+FL K+Q +FFL
Sbjct: 32 FSVGERVLAHHGPLLYGAKVKKIEYLDNQQ-----RYYVHYLGWNKNWDEWVDGDRLMKLTEENVQKQKELEK--NFSADKNPKLGRSPIKPRSSNDTNVDKEDLQNYVGRSKKRKGDYGIEEEDTGSTK-----MLMKIQFPLTLKKQLADDWEFVTQL---GKLVKLPRNPNVDGILKKYLAYRSKKNDMAAESVEEILNGMRNYFDKALPVMLLYKKERRQYDEAIVD--NVSPSAVYGAEHLLRLFVKLPELLAYVNM-EKEALSQLQQKLQDFLKFLQKNQSAFFL 304
BLAST of mRNA_H-akashiwo_Contig118.19.1 vs. uniprot
Match: K7MM16_SOYBN (MRG domain-containing protein n=20 Tax=indigoferoid/millettioid clade TaxID=2233855 RepID=K7MM16_SOYBN) HSP 1 Score: 147 bits (372), Expect = 1.040e-38 Identity = 101/293 (34.47%), Postives = 162/293 (55.29%), Query Frame = 1
Query: 13 YEVGDTCVVKDGGKDYQAKVLKIEMKKGKNGKKIKQYFIHYLGWNSRWDKWVELKEITPIELKNPSKKKKARKSENLGAPASTNNSVKKVKTEESAASSVKSESVCGGEESSASGDDAKAKTNKPSV---RPSLDGSKL-KIRMGLALKEQLASEWQRLSQAETENTLVPLPRSPTVNDILQQFVE--SRKLDITPSAFEDFAEGLREFFDEALPLRLLYKSERKQYDDMFGDPSGKKPSEVYGAEHFLRLFVVLGDCLNTSDVTDKKEKKDLQEKITGLLQFLLKHQDSFFL 873
Y G+ + G + Y+AKV K E++K + +YF+HYLGW+ WD+WV + + +N K++ K +N+ K VK+ S+ K + ++ + +K K K + S KL KI++ LK+QL +W ++Q ++ LV LPRSPTV++I+ +++E S+K + P + + +G+R +FD+ALP+ LLYK ERKQY+D D PS +YGAEH LRLFV L + L + ++ + LQ+K+ L+FL K+Q +FFL
Sbjct: 29 YSEGEKVLAYHGPRIYEAKVQKTEIRKSEW-----KYFVHYLGWSKNWDEWVGEERLMKHTEENVLKQQALDKKQNVD---------KNVKSGRSSQGKAKISTDAKMDKEDVKNNVSKGKKRKHDAGVEKGSGTVEKLVKIQIPATLKKQLVDDWDSVTQ---QDKLVKLPRSPTVDEIMTKYLEYKSKKDGVAPDSIGEILKGIRCYFDKALPMMLLYKKERKQYNDSIVD--NVSPSTIYGAEHLLRLFVKLPELLAYVTIEEETLNR-LQQKLLDFLKFLQKNQSTFFL 301
BLAST of mRNA_H-akashiwo_Contig118.19.1 vs. uniprot
Match: A0A2P6RNS4_ROSCH (Putative chromatin remodeling & transcriptional activation CHROMO-DOMAIN family n=2 Tax=Rosoideae TaxID=171638 RepID=A0A2P6RNS4_ROSCH) HSP 1 Score: 146 bits (369), Expect = 2.880e-38 Identity = 104/293 (35.49%), Postives = 159/293 (54.27%), Query Frame = 1
Query: 13 YEVGDTCVVKDGGKDYQAKVLKIEMKKGKNGKKIKQYFIHYLGWNSRWDKWVELKEITPIELKNPSKKKKARKSENLGAPASTNNSVKKVKTEESAASSVKSESVCGGEESSASGDDAKAKTNKPSVRPSLDGSKL----KIRMGLALKEQLASEWQRLSQAETENTLVPLPRSPTVNDILQQFVESR--KLDITPSAFEDFAEGLREFFDEALPLRLLYKSERKQYDDMFGDPSGKKPSEVYGAEHFLRLFVVLGDCLNTSDVTDKKEKKDLQEKITGLLQFLLKHQDSFFL 873
Y G+ + G + Y+AKV K E++K + +YF+HYLGWN WD+WV + I +N K++ K + + K K+ SA + KS + E+ + AK K K D L KI++ LAL++QL +W+ + + ++ LV LPRSPTV+DILQ++++ R K + +G+R +FD+ALP+ LLYK ERKQY D D PS +YGAEH LRLFV L + L ++ ++ + LQ+++ L+FL K+Q +FFL
Sbjct: 29 YSEGEKILAYHGPRIYEAKVQKAEIRKNEW-----RYFVHYLGWNKNWDEWVGVDRILKYTEENILKQQALDKKQGVD---------KNTKSGRSAHTKPKSSADAKVEKEDQKNNVAKGKKRKNDSGAEKDSVTLEKLVKIQIPLALRKQLVEDWEFVCE---QDKLVKLPRSPTVDDILQKYLDYRTKKDGKLTDPVGEVLKGIRCYFDKALPMILLYKKERKQYHDTIVDDVS--PSTIYGAEHLLRLFVKLPELLAYVNIEEETLTR-LQQQLLDFLKFLQKNQTTFFL 301
BLAST of mRNA_H-akashiwo_Contig118.19.1 vs. uniprot
Match: UPI001CC7B887 (protein MRG1-like isoform X2 n=7 Tax=Proteaceae TaxID=4328 RepID=UPI001CC7B887) HSP 1 Score: 145 bits (366), Expect = 8.330e-38 Identity = 103/298 (34.56%), Postives = 167/298 (56.04%), Query Frame = 1
Query: 13 YEVGDTCVVKDGGKDYQAKVLKIEMKKGKNGKKIKQYFIHYLGWNSRWDKWVELKEITPIELKNPSKKKKARKS----ENLGAPASTNNSVKKVKTEESAASSVKSESVC-----GGEESSASGDDAKAKTNKPSVRPSLDGSKLKIRMGLALKEQLASEWQRLSQAETENTLVPLPRSPTVNDILQQFVE--SRKLDITPSAFEDFAEGLREFFDEALPLRLLYKSERKQYDDMFGDPSGKKPSEVYGAEHFLRLFVVLGDCLNTSDVTDKKEKKDLQEKITGLLQFLLKHQDSFFL 873
+ G+ + G + Y+AKVLK+E +K K +Y++HYLGW+ WD+WV + + +N K+K K ++L A ST ++K + SA + V E + G + S SG + K + + +KI++ LK+QL +W+ ++Q LV LPRSP V+DIL+++++ S+K + + + +GLR +FD+ALP+ LLYK ER+QYD+ D PS VYGAEH LRLFV L + L +++ ++ + LQ+K+ L+F+ K+Q +FFL
Sbjct: 31 FSEGEKVLAFHGPRLYEAKVLKVEFRK-----KEWRYYVHYLGWSKNWDEWVGVDRLRKFTEENVRKQKDLEKKLSADKSLKAGRST-----QIKPKGSADAKVDKEDLRNYVARGKKRKSDSGIEEKDIESMEKL--------VKIQIPSTLKKQLVDDWEFVTQL---GKLVKLPRSPCVDDILKKYLDYKSKKDGMVADSIGEILKGLRCYFDKALPVMLLYKKERQQYDEAIAD--NVSPSTVYGAEHLLRLFVKLPELLTYANIEEETLMR-LQQKLLEFLKFMQKNQSTFFL 304
BLAST of mRNA_H-akashiwo_Contig118.19.1 vs. uniprot
Match: UPI000B8C92D4 (protein MRG1 n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8C92D4) HSP 1 Score: 147 bits (371), Expect = 9.230e-38 Identity = 104/293 (35.49%), Postives = 164/293 (55.97%), Query Frame = 1
Query: 13 YEVGDTCVVKDGGKDYQAKVLKIEMKKGKNGKKIKQYFIHYLGWNSRWDKWVELKEITPIELKNPSKKKKARKSENLGAPASTNNSVKKVKTEESAASSVKSESVCGGEESSASGDDAKAKTNKPSV---RPSLDGSKL-KIRMGLALKEQLASEWQRLSQAETENTLVPLPRSPTVNDILQQFVESR--KLDITPSAFEDFAEGLREFFDEALPLRLLYKSERKQYDDMFGDPSGKKPSEVYGAEHFLRLFVVLGDCLNTSDVTDKKEKKDLQEKITGLLQFLLKHQDSFFL 873
+ G+ + G + Y+AKV K E++K K +YF+HYLGWN WD+WV + +N K++ K LG S+ K+ SA + KS + ++ + AK K K + +L KL KI++ LK+QL +W+ ++Q ++ LV LPRSP+++DIL +++E R K + + + +G+R +FD+ALP+ LLYK ER+QY + GD PS VYGAEH LRLFV L + L ++ ++ + LQ+K+ LL+FL K+Q +FF+
Sbjct: 116 FSEGERVLAYHGPRVYEAKVQKAELRK-----KEWKYFVHYLGWNKNWDEWVSADRLMKHNEENIMKQQALEKK--LGVDKSS-------KSARSAQAKAKSSTDAKVDKEDLKSNVAKGKKRKVESGIEKDNLSVEKLVKIQIPSTLKKQLVDDWEFVTQ---QDKLVKLPRSPSIDDILTKYLEYRTKKDGMVADSIGEILKGIRCYFDKALPVILLYKKERQQYQETVGDDVS--PSTVYGAEHLLRLFVKLPELLAYVNIEEETLTR-LQQKLLDLLKFLQKNQSTFFV 388 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig118.19.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig118.19.1 >prot_H-akashiwo_Contig118.19.1 ID=prot_H-akashiwo_Contig118.19.1|Name=mRNA_H-akashiwo_Contig118.19.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=296bp MQTDYEVGDTCVVKDGGKDYQAKVLKIEMKKGKNGKKIKQYFIHYLGWNSback to top mRNA from alignment at H-akashiwo_Contig118:654005..654892- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig118.19.1 ID=mRNA_H-akashiwo_Contig118.19.1|Name=mRNA_H-akashiwo_Contig118.19.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=888bp|location=Sequence derived from alignment at H-akashiwo_Contig118:654005..654892- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig118:654005..654892- >mRNA_H-akashiwo_Contig118.19.1 ID=mRNA_H-akashiwo_Contig118.19.1|Name=mRNA_H-akashiwo_Contig118.19.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=888bp|location=Sequence derived from alignment at H-akashiwo_Contig118:654005..654892- (Heterosigma akashiwo CCMP452)back to top |