mRNA_H-akashiwo_Contig1177.1.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1177.1.1 vs. uniprot
Match: A0A097IUT3_UNDPI (Aspartate aminotransferase n=1 Tax=Undaria pinnatifida TaxID=74381 RepID=A0A097IUT3_UNDPI) HSP 1 Score: 116 bits (291), Expect = 6.450e-28 Identity = 57/105 (54.29%), Postives = 71/105 (67.62%), Query Frame = 2
Query: 68 ELAKDKTGEIWTQLLKLAKQPGVVNLGQGFPDYSGSRVAREAAAEAMTNPEMLTLNQYSLPAGLGTLQQAVCDFYNRTYNL---SGTRGEYTPANVAVVAEQLRG 373
E + D G IW +LL L+ QPGV NLGQGFPDY+GSRVAREAAA AMT P M LNQY+LP+GLG+L+ A+C +YN+ Y L + + +P NV V G
Sbjct: 26 EFSSDTVGAIWNELLVLSGQPGVCNLGQGFPDYAGSRVAREAAAAAMTKPAMSELNQYTLPSGLGSLKSAICAYYNKCYGLQEGASRKRAISPENVVVTVGATEG 130
BLAST of mRNA_H-akashiwo_Contig1177.1.1 vs. uniprot
Match: A0A097IUS9_SCYLO (Aspartate aminotransferase n=3 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A097IUS9_SCYLO) HSP 1 Score: 115 bits (287), Expect = 2.070e-27 Identity = 58/101 (57.43%), Postives = 71/101 (70.30%), Query Frame = 2
Query: 65 RELAKDKTGEIWTQLLKLAKQPGVVNLGQGFPDYSGSRVAREAAAEAMTNPEMLTLNQYSLPAGLGTLQQAVCDFYNRTYNLSGTRGEYTPANVAVVAEQL 367
+E + TG+IW +LL LA+QPGVVNLGQGFPDY GS+VAREAAAEAM +P LNQYSLP GL +LQ AV +YN++Y L E AN A+ E +
Sbjct: 20 KEFENNTTGDIWNELLVLARQPGVVNLGQGFPDYDGSKVAREAAAEAMVDPAKTALNQYSLPLGLKSLQSAVSTYYNKSYGLK----EGATANKAIGPENV 116
BLAST of mRNA_H-akashiwo_Contig1177.1.1 vs. uniprot
Match: A0A097IUU6_9PHAE (Aspartate aminotransferase n=1 Tax=Saccharina sculpera TaxID=416830 RepID=A0A097IUU6_9PHAE) HSP 1 Score: 112 bits (279), Expect = 3.460e-26 Identity = 55/98 (56.12%), Postives = 67/98 (68.37%), Query Frame = 2
Query: 68 ELAKDKTGEIWTQLLKLAKQPGVVNLGQGFPDYSGSRVAREAAAEAMTNPEMLTLNQYSLPAGLGTLQQAVCDFYNRTYNLSGTRG---EYTPANVAV 352
E + + IW +LL L QPGV NLGQGFPDYSGSRVAREAAA AM +P M +NQY+LPAGLG+L+ A+C +YN+ Y L G G P NV +
Sbjct: 30 EFRSNTSETIWNELLVLGMQPGVCNLGQGFPDYSGSRVAREAAAAAMVDPSMSGINQYTLPAGLGSLRSAICAYYNKCYGLHGGGGGKKAIAPENVMI 127
BLAST of mRNA_H-akashiwo_Contig1177.1.1 vs. uniprot
Match: A0A097IUV4_9PHAE (Aspartate aminotransferase n=1 Tax=Dictyopteris undulata TaxID=156997 RepID=A0A097IUV4_9PHAE) HSP 1 Score: 110 bits (275), Expect = 1.220e-25 Identity = 56/104 (53.85%), Postives = 67/104 (64.42%), Query Frame = 2
Query: 68 ELAKDKTGEIWTQLLKLAKQPGVVNLGQGFPDYSGSRVAREAAAEAMTNPEMLTLNQYSLPAGLGTLQQAVCDFYNRTYNLS--GTRGEYTPANVAVVAEQLRG 373
ELA D G W +LL+LA+QPGV NLGQG+PDY GS VAR AAAEAMT +M LNQYS P+G +LQ AVC +YN+ Y L T+ P NV + G
Sbjct: 25 ELALDSAGPEWAELLELARQPGVCNLGQGYPDYEGSSVARAAAAEAMTKSDMSLLNQYSFPSGSKSLQGAVCSYYNKHYELKDGATKRALKPENVLITIGATEG 128
BLAST of mRNA_H-akashiwo_Contig1177.1.1 vs. uniprot
Match: A0A097IUU4_9PHAE (Aspartate aminotransferase n=7 Tax=Sargassum TaxID=3015 RepID=A0A097IUU4_9PHAE) HSP 1 Score: 110 bits (274), Expect = 1.590e-25 Identity = 55/107 (51.40%), Postives = 69/107 (64.49%), Query Frame = 2
Query: 59 VSRELAKDKTGEIWTQLLKLAKQPGVVNLGQGFPDYSGSRVAREAAAEAMTNPEMLTLNQYSLPAGLGTLQQAVCDFYNRTYNLSGTRGE--YTPANVAVVAEQLRG 373
+ E DKT IW +LL LA+QPGV NLGQG PDY+G +VAREAA +AM +P+ LNQYS+PAGL +LQ AVC +YN Y L + + TP NV + G
Sbjct: 19 IQAEFDFDKTSTIWKELLVLARQPGVCNLGQGCPDYNGHQVAREAAVQAMLDPDKSALNQYSMPAGLKSLQDAVCAYYNNVYGLREGQAKRAITPENVLITVGATEG 125
BLAST of mRNA_H-akashiwo_Contig1177.1.1 vs. uniprot
Match: A0A097IUQ5_9PHAE (Aspartate aminotransferase n=1 Tax=Desmarestia viridis TaxID=62313 RepID=A0A097IUQ5_9PHAE) HSP 1 Score: 109 bits (272), Expect = 3.150e-25 Identity = 54/104 (51.92%), Postives = 70/104 (67.31%), Query Frame = 2
Query: 8 MASLKNVTASLFGFPAKVS---RELAKDKTGEIWTQLLKLAKQPGVVNLGQGFPDYSGSRVAREAAAEAMTNPEMLTLNQYSLPAGLGTLQQAVCDFYNRTYNL 310
MAS+ + PA S E D G IW++LL LA+QPGV NLGQG+PDY GS+VAREAA++AM P M +NQYS+P GL +LQ++VC +YN+ Y L
Sbjct: 1 MASMPDSLIRTGDIPALSSLTQAEFKLDTAGTIWSELLALARQPGVCNLGQGYPDYDGSKVAREAASQAMLEPTMSAMNQYSMPPGLKSLQESVCTYYNKRYQL 104
BLAST of mRNA_H-akashiwo_Contig1177.1.1 vs. uniprot
Match: A0A7S3Y5R2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5R2_HETAK) HSP 1 Score: 108 bits (269), Expect = 3.500e-25 Identity = 52/56 (92.86%), Postives = 52/56 (92.86%), Query Frame = 2
Query: 206 MTNPEMLTLNQYSLPAGLGTLQQAVCDFYNRTYNLSGTRGEYTPANVAVVAEQLRG 373
MTNPEMLTLNQYSLPAGLGTLQQAVCDFYNRTYNLSGTRGEYTPANVAVVA G
Sbjct: 1 MTNPEMLTLNQYSLPAGLGTLQQAVCDFYNRTYNLSGTRGEYTPANVAVVAGATEG 56
BLAST of mRNA_H-akashiwo_Contig1177.1.1 vs. uniprot
Match: D7FQ50_ECTSI (Aspartate Aminotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ50_ECTSI) HSP 1 Score: 108 bits (269), Expect = 7.370e-25 Identity = 57/104 (54.81%), Postives = 64/104 (61.54%), Query Frame = 2
Query: 68 ELAKDKTGEIWTQLLKLAKQPGVVNLGQGFPDYSGSRVAREAAAEAMTNPEMLTLNQYSLPAGLGTLQQAVCDFYNRTYNLS--GTRGEYTPANVAVVAEQLRG 373
E + TG IW +LL LA+QPGVVNLGQGFPDY GS AR AAAE MT+P LNQYSLP GL +LQ AV +YN+ Y L T P NV V G
Sbjct: 20 EFECNTTGGIWNELLVLARQPGVVNLGQGFPDYDGSMAARAAAAETMTDPSKTALNQYSLPPGLKSLQSAVSTYYNKCYGLQEGATNRAIGPENVLVTVGATEG 123
BLAST of mRNA_H-akashiwo_Contig1177.1.1 vs. uniprot
Match: A0A7S2V1G2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1G2_9STRA) HSP 1 Score: 100 bits (250), Expect = 4.820e-22 Identity = 50/84 (59.52%), Postives = 63/84 (75.00%), Query Frame = 2
Query: 53 AKVSRELAKDKTGEIWTQLLKLAKQPGVVNLGQGFPDYSGSRVAREAAAEAMTNPEMLTLNQYSLPAGLGTLQQAVCDFYNRTY 304
++V EL + T E+W++L+ LAK PGVVNLGQGFPDY GS +AR+AAA+A TN L NQYSLP GL +L++AVC FYN Y
Sbjct: 54 SRVQAELQSNTTNEVWSELVTLAKAPGVVNLGQGFPDYCGSEIARQAAADA-TNATHL--NQYSLPTGLDSLKEAVCTFYNSQY 134
BLAST of mRNA_H-akashiwo_Contig1177.1.1 vs. uniprot
Match: A0A097IUR5_SARFS (Aspartate aminotransferase n=1 Tax=Sargassum fusiforme TaxID=590727 RepID=A0A097IUR5_SARFS) HSP 1 Score: 96.3 bits (238), Expect = 2.710e-21 Identity = 48/104 (46.15%), Postives = 66/104 (63.46%), Query Frame = 2
Query: 68 ELAKDKTGEIWTQLLKLAKQPGVVNLGQGFPDYSGSRVAREAAAEAMTNPEMLTLNQYSLPAGLGTLQQAVCDFYNRTYNLSGTRGE--YTPANVAVVAEQLRG 373
E DKT I +L+ L++QPGV +L G+PDY+G +VAREAA +AM +P+ + LNQYS+P GL +LQ AVC +YNR Y L + + P NV + G
Sbjct: 22 EFNLDKTSTISKELVVLSRQPGVCDLRLGYPDYNGHQVAREAAVQAMLDPDKIALNQYSMPTGLKSLQDAVCAYYNRFYGLREGQAKRAIAPENVLITVSATEG 125 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1177.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1177.1.1 >prot_H-akashiwo_Contig1177.1.1 ID=prot_H-akashiwo_Contig1177.1.1|Name=mRNA_H-akashiwo_Contig1177.1.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=137bp MASLKNVTASLFGFPAKVSRELAKDKTGEIWTQLLKLAKQPGVVNLGQGFback to top mRNA from alignment at H-akashiwo_Contig1177:12571..20589+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1177.1.1 ID=mRNA_H-akashiwo_Contig1177.1.1|Name=mRNA_H-akashiwo_Contig1177.1.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=8019bp|location=Sequence derived from alignment at H-akashiwo_Contig1177:12571..20589+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1177:12571..20589+ >mRNA_H-akashiwo_Contig1177.1.1 ID=mRNA_H-akashiwo_Contig1177.1.1|Name=mRNA_H-akashiwo_Contig1177.1.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=411bp|location=Sequence derived from alignment at H-akashiwo_Contig1177:12571..20589+ (Heterosigma akashiwo CCMP452)back to top |