mRNA_H-akashiwo_Contig1174.1.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1174.1.1 vs. uniprot
Match: A0A7S3XVA0_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVA0_HETAK) HSP 1 Score: 344 bits (882), Expect = 4.360e-115 Identity = 165/168 (98.21%), Postives = 167/168 (99.40%), Query Frame = 1
Query: 1 LLKQGVISESSSNFNAPIVMVAKKTGETRMCLDLRALNAITTPSKFPLPTAREMFDNLAEAYYFTSLDMLWVYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCEYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKC 504
LLKQGVISESSSNFNAPIVMVAKK+GETRMCLDLRALNAITTPSKFPLPTAREMFDNLAEAYYFTSLDMLW YWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGC+YEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKC
Sbjct: 120 LLKQGVISESSSNFNAPIVMVAKKSGETRMCLDLRALNAITTPSKFPLPTAREMFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKC 287
BLAST of mRNA_H-akashiwo_Contig1174.1.1 vs. uniprot
Match: A0A7S3XV63_HETAK (Hypothetical protein (Fragment) n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XV63_HETAK) HSP 1 Score: 344 bits (882), Expect = 8.620e-113 Identity = 165/168 (98.21%), Postives = 167/168 (99.40%), Query Frame = 1
Query: 1 LLKQGVISESSSNFNAPIVMVAKKTGETRMCLDLRALNAITTPSKFPLPTAREMFDNLAEAYYFTSLDMLWVYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCEYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKC 504
LLKQGVISESSSNFNAPIVMVAKK+GETRMCLDLRALNAITTPSKFPLPTAREMFDNLAEAYYFTSLDMLW YWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGC+YEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKC
Sbjct: 120 LLKQGVISESSSNFNAPIVMVAKKSGETRMCLDLRALNAITTPSKFPLPTAREMFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKC 287
BLAST of mRNA_H-akashiwo_Contig1174.1.1 vs. uniprot
Match: A0A7S3XU57_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XU57_HETAK) HSP 1 Score: 258 bits (658), Expect = 1.510e-83 Identity = 121/149 (81.21%), Postives = 133/149 (89.26%), Query Frame = 1
Query: 58 MVAKKTGETRMCLDLRALNAITTPSKFPLPTAREMFDNLAEAYYFTSLDMLWVYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCEYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKC 504
MV KKTGETRMCLDLR+LNAITTP+KFPLPT REMFD L AYYF+SLDMLW YWSVPLR+ DK KTAFTVRN+KYAFNVMCFGLTNAPATFSHLVNKVFQGC+++FALCFLDDVLCY+ +F+LHL L +IF RM ANLKFKLPKC
Sbjct: 1 MVKKKTGETRMCLDLRSLNAITTPAKFPLPTPREMFDQLEGAYYFSSLDMLWAYWSVPLRDEDKHKTAFTVRNKKYAFNVMCFGLTNAPATFSHLVNKVFQGCQHDFALCFLDDVLCYTGPDFSLHLRQLEEIFIRMIKANLKFKLPKC 149
BLAST of mRNA_H-akashiwo_Contig1174.1.1 vs. uniprot
Match: A0A0P5XPI7_9CRUS (Polyprotein of retroviral origin (Fragment) n=1 Tax=Daphnia magna TaxID=35525 RepID=A0A0P5XPI7_9CRUS) HSP 1 Score: 154 bits (390), Expect = 2.010e-42 Identity = 77/168 (45.83%), Postives = 105/168 (62.50%), Query Frame = 1
Query: 1 LLKQGVISESSSNFNAPIVMVAKKTGETRMCLDLRALNAITTPSKFPLPTAREMFDNLAEAYYFTSLDMLWVYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCEYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKC 504
+L ++ ES S F A IVMV KK GE RMC+D RALN IT K+PLP + D L ++YF+ LD+L YW + + E DK KTAF +Y FN M FGLTNAP+TF +N + + Y+FAL +LDD++ +S + T H+ HL +F+ ++ A LK K KC
Sbjct: 123 MLSNKILRESHSPFAAAIVMVPKKDGEMRMCIDYRALNKITVKDKYPLPRIDDTIDALCGSFYFSILDLLSGYWQIEIEESDKHKTAFICEFGQYEFNRMPFGLTNAPSTFQRAMNNILKTVLYKFALVYLDDIIVFS-NSITDHVTHLEAVFRLLKQAGLKLKRKKC 289
BLAST of mRNA_H-akashiwo_Contig1174.1.1 vs. uniprot
Match: A0A0P5U4C5_9CRUS (Polyprotein of retroviral origin (Fragment) n=1 Tax=Daphnia magna TaxID=35525 RepID=A0A0P5U4C5_9CRUS) HSP 1 Score: 149 bits (375), Expect = 5.320e-42 Identity = 75/164 (45.73%), Postives = 102/164 (62.20%), Query Frame = 1
Query: 1 LLKQGVISESSSNFNAPIVMVAKKTGETRMCLDLRALNAITTPSKFPLPTAREMFDNLAEAYYFTSLDMLWVYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCEYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFK 492
+L ++ ES S F A IVMV KK GE RMC+D RALN IT K+PLP + D L + YF+ LD+L YW + + E DK KTAF +Y FN M FGLTNAP+TF +N + + Y+FAL +LDD++ +S + T H+ HL +F+ ++ A LK K
Sbjct: 62 MLSNKILRESHSPFAAAIVMVPKKDGEMRMCIDYRALNKITVKDKYPLPRIDDTIDALCGSVYFSILDLLSDYWQIEIEESDKHKTAFICEFGQYEFNRMPFGLTNAPSTFQRAMNNILKTVLYKFALVYLDDIIVFS-NSITDHVTHLEAVFRLLKQAGLKLK 224
BLAST of mRNA_H-akashiwo_Contig1174.1.1 vs. uniprot
Match: A0A6B0VG58_IXORI (RNA-directed DNA polymerase (Fragment) n=1 Tax=Ixodes ricinus TaxID=34613 RepID=A0A6B0VG58_IXORI) HSP 1 Score: 157 bits (398), Expect = 1.550e-41 Identity = 76/168 (45.24%), Postives = 108/168 (64.29%), Query Frame = 1
Query: 1 LLKQGVISESSSNFNAPIVMVAKKTGETRMCLDLRALNAITTPSKFPLPTAREMFDNLAEAYYFTSLDMLWVYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCEYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKC 504
+LK+GVI S S+F++P+V+V KK G R C+D R LN IT +P+P + D+L A YF+SLD+ YW +P+ E DK KTAF + Y FNVM FGL NAPATF +++ + +G +++ LC+LDD++ +S NF HL LSQ+ + AANL+ KC
Sbjct: 59 MLKKGVIRPSCSSFSSPVVLVKKKDGGIRFCIDYRELNEITRKDLYPMPRIDDALDSLQGAEYFSSLDLRSGYWQIPVNEEDKEKTAFVTPDGLYEFNVMPFGLCNAPATFERMIDNILRGLKWKTCLCYLDDIVIFSS-NFEEHLERLSQVLSCLSAANLQLNTKKC 225
BLAST of mRNA_H-akashiwo_Contig1174.1.1 vs. uniprot
Match: A0A015J1N0_RHIIW (Gag-pol fusion protein n=1 Tax=Rhizophagus irregularis (strain DAOM 197198w) TaxID=1432141 RepID=A0A015J1N0_RHIIW) HSP 1 Score: 151 bits (382), Expect = 4.260e-41 Identity = 73/168 (43.45%), Postives = 108/168 (64.29%), Query Frame = 1
Query: 1 LLKQGVISESSSNFNAPIVMVAKKTGETRMCLDLRALNAITTPSKFPLPTAREMFDNLAEAYYFTSLDMLWVYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCEYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKC 504
+L+QG+I S+S ++ P+V+V KK G+ R C++ + LN IT +PLP E+ D+L +A +FT+LD+ YW + +R D+ KTAF + Y F VM FGL NAPATF ++KV G + +F L +LDDV+ YS + F H+ HL ++ R+R ANL+ K KC
Sbjct: 1 MLEQGLIKPSTSPWSFPVVVVKKKNGKLRFCVNYKPLNDITKKDNYPLPRIDELLDSLQDAQWFTTLDLASGYWQIKVRAEDQEKTAFITKFGTYEFKVMPFGLCNAPATFQRTMDKVLHGIKEKFVLVYLDDVIIYS-KTFKDHIQHLEEVLNRIRKANLRLKAEKC 167
BLAST of mRNA_H-akashiwo_Contig1174.1.1 vs. uniprot
Match: A0A015L6B7_RHIIW (Gag-pol fusion protein n=1 Tax=Rhizophagus irregularis (strain DAOM 197198w) TaxID=1432141 RepID=A0A015L6B7_RHIIW) HSP 1 Score: 145 bits (365), Expect = 5.770e-41 Identity = 73/165 (44.24%), Postives = 101/165 (61.21%), Query Frame = 1
Query: 10 QGVISESSSNFNAPIVMVAKKTGETRMCLDLRALNAITTPSKFPLPTAREMFDNLAEAYYFTSLDMLWVYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCEYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKC 504
QG+I +S+S + +P+V+V KK GE R+C+D R LNA+T +PLP +M ++ + A +FT+LD+ YW V + D KTAF Y F VM FGL AP TF L+N++ Q +F +LDDV+ YS HL HL Q+F+ +R ANLK KL KC
Sbjct: 4 QGLIRKSASPWASPVVIVDKKGGEKRLCIDYRKLNAVTKADAYPLPRIDDMLESFSNATWFTTLDLASGYWQVAMDPADIEKTAFITPFGLYKFLVMPFGLAYAPGTFQRLMNRILQEYLGKFVAVYLDDVIIYSKGTLEQHLDHLRQVFETLRRANLKIKLKKC 168
BLAST of mRNA_H-akashiwo_Contig1174.1.1 vs. uniprot
Match: A0A821ZGR2_9BILA (Hypothetical protein n=1 Tax=Rotaria socialis TaxID=392032 RepID=A0A821ZGR2_9BILA) HSP 1 Score: 148 bits (373), Expect = 6.160e-41 Identity = 71/168 (42.26%), Postives = 106/168 (63.10%), Query Frame = 1
Query: 1 LLKQGVISESSSNFNAPIVMVAKKTGETRMCLDLRALNAITTPSKFPLPTAREMFDNLAEAYYFTSLDMLWVYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCEYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKC 504
LLKQG+I S S +++P+V+V KK G R C+ LNAIT FPLP ++FD L+++++FT+LD Y+ VPL + D+SKT F+ R+ +Y F V+ G+TN P TF +VN + ++++L +LDDV+ YS +F HL HL I R+ AN + + KC
Sbjct: 23 LLKQGIIEPSISPWSSPVVLVKKKDGTHRFCVYFTKLNAITIRDHFPLPRIDDIFDQLSDSHFFTTLDFKSGYFQVPLDKRDRSKTTFSTRDSRYQFTVLPQGITNGPPTFQRIVNNILGNSRWKYSLAYLDDVIIYSS-SFNEHLEHLDDILTRLNTANFRLNIDKC 189
BLAST of mRNA_H-akashiwo_Contig1174.1.1 vs. uniprot
Match: A0A392PP11_9FABA (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392PP11_9FABA) HSP 1 Score: 144 bits (363), Expect = 9.140e-41 Identity = 74/168 (44.05%), Postives = 103/168 (61.31%), Query Frame = 1
Query: 1 LLKQGVISESSSNFNAPIVMVAKKTGETRMCLDLRALNAITTPSKFPLPTAREMFDNLAEAYYFTSLDMLWVYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCEYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKC 504
+L+QG+I S+S F++PI++V KK G R C D RALN IT FP+PT E+ D L A YF+ LD+ Y + ++ D+ KTAF + Y + VM FGLTNAPATF L+NK+FQ +F L F DD+L YS ++ HL HL + + ++ L +L KC
Sbjct: 5 MLEQGIIQPSNSPFSSPILLVKKKDGSWRFCTDYRALNTITVKDSFPMPTVDELLDELYGAMYFSKLDLRSGYHQILVKPEDRCKTAFRTHHGHYEWLVMPFGLTNAPATFQCLMNKIFQSALRKFVLVFFDDILVYST-SWREHLIHLESVLQTLQHHQLYARLSKC 171 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1174.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1174.1.1 >prot_H-akashiwo_Contig1174.1.1 ID=prot_H-akashiwo_Contig1174.1.1|Name=mRNA_H-akashiwo_Contig1174.1.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=168bp LLKQGVISESSSNFNAPIVMVAKKTGETRMCLDLRALNAITTPSKFPLPTback to top mRNA from alignment at H-akashiwo_Contig1174:14408..14911+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1174.1.1 ID=mRNA_H-akashiwo_Contig1174.1.1|Name=mRNA_H-akashiwo_Contig1174.1.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=504bp|location=Sequence derived from alignment at H-akashiwo_Contig1174:14408..14911+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1174:14408..14911+ >mRNA_H-akashiwo_Contig1174.1.1 ID=mRNA_H-akashiwo_Contig1174.1.1|Name=mRNA_H-akashiwo_Contig1174.1.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=504bp|location=Sequence derived from alignment at H-akashiwo_Contig1174:14408..14911+ (Heterosigma akashiwo CCMP452)back to top |