mRNA_H-akashiwo_Contig117.20.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig117.20.1
Unique NamemRNA_H-akashiwo_Contig117.20.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig117.20.1 vs. uniprot
Match: A0A7S3UVC1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVC1_HETAK)

HSP 1 Score: 317 bits (812), Expect = 3.340e-99
Identity = 153/174 (87.93%), Postives = 163/174 (93.68%), Query Frame = 1
Query: 2188 EVKAHKPVDVPMDPRLDLFEEGSLMQEPRQYQSLIGALTWLTCCTAPTLATAVNRLAQFLVAPTEMHWAAALAVLAYAHQHLDEMELEIGGGGLELRGYADADFAPDRDRKSTSGYVFFIGHTTLSWASRKQKGVVLHSTHAELNALLEGGKEALHLRQLCGFLLILLQRDGFP 2709
            EVKAHKPV+VP+DP LDLFEE SL++EPRQYQSLIGALTWLTCCTAPTLATAVNRLAQFLVAPTE+HWAAA+AVLAYAHQHLDE+    GGGGLE+RGYADADFA DRDRKSTSGYVFFIGHTTLSWASRKQKG+VLHSTHAELNALLE GKE LHLRQLCGFLL+LLQ D FP
Sbjct:    1 EVKAHKPVEVPLDPSLDLFEESSLLKEPRQYQSLIGALTWLTCCTAPTLATAVNRLAQFLVAPTELHWAAAIAVLAYAHQHLDELXXXXGGGGLEIRGYADADFARDRDRKSTSGYVFFIGHTTLSWASRKQKGIVLHSTHAELNALLEAGKETLHLRQLCGFLLLLLQLDQFP 174          
BLAST of mRNA_H-akashiwo_Contig117.20.1 vs. uniprot
Match: A0A7S4DBW5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DBW5_HETAK)

HSP 1 Score: 309 bits (791), Expect = 2.880e-96
Identity = 147/165 (89.09%), Postives = 156/165 (94.55%), Query Frame = 1
Query: 1426 PDSDVWAKAMMEQMTKWQKRGIGILVMREPGMEVVRTRWVFAWKGDGRAKARIAAKGFDQTFGVSYSESFSPTLKMTSLRLFLHLCVEYGLDIFMDDVVAAFISSELGEDEVYLEVPEGFVCPPGYVLHLRAPVEGLKQASAKWTRKIDGIMTTQGFQPVAMGLE 1920
            PDSD+WAKAMMEQ+ KWQKRGIG L+ R+PGMEV+RTRWVFAWK DGRAKARIAAKGFDQT GVSYSESFSPTLKMTSLRLFLHLCVEY LD++MDDVVAAFISSELGEDEVYLEVPEGF CPPGYVLHLRA VEGLKQASAKWTRKIDGI+TT+GFQPVA GLE
Sbjct:    1 PDSDIWAKAMMEQLGKWQKRGIGTLIQRKPGMEVIRTRWVFAWKDDGRAKARIAAKGFDQTLGVSYSESFSPTLKMTSLRLFLHLCVEYDLDMYMDDVVAAFISSELGEDEVYLEVPEGFDCPPGYVLHLRAAVEGLKQASAKWTRKIDGILTTEGFQPVAKGLE 165          
BLAST of mRNA_H-akashiwo_Contig117.20.1 vs. uniprot
Match: A0A8H8JF23_9AGAM (Copia-like polyprotein/retrotransposon n=1 Tax=Ceratobasidium sp. AG-Ba TaxID=170446 RepID=A0A8H8JF23_9AGAM)

HSP 1 Score: 320 bits (820), Expect = 9.130e-89
Identity = 286/948 (30.17%), Postives = 434/948 (45.78%), Query Frame = 1
Query:    4 ASTPVRDILKHLHRVFGHVAYDRLRMMQKSGAVIGLSDLPEVEMPANGCDTCMQGKAEKASMASTSSSTRAAQPADEIWFDLHFPKVKKSKTLGGYYCFASITDDATGYLKVKLLKSKDGAGAAYKEYSAMVKAQYRRVVRIFHHGDNDPVTLGDGKFQAYLKQEGTHPEPTDVGEPRMNARAEAAGKSVMRMARCMILGARLPDRYWPFAVLYAAHIYNCSTHEDHGTVTPYEGWHGRKPDLGHLHAFGCFCVVTKLERKQKASSKMAPRGDPGIFLGIDESFPPKYVVLNGTTGKEIRSRSVVFNENIFTGLARGDLWVAYRDLVDGIEAVTDTPGRMPRPQRRSQQKKHVSFAGPEAGEPELRAP-QRPLQQEEAGSMVPNDPEEEEAEPGD-QKGALAFDPDLIAAAEGKPRSEERRSARLRGKPRPNYSGKTTRGDRAKEAAVEQFCGLMAAVEAGPEKITPQSFYQAIDGPDSDVWAKAMMEQMTKWQKRGIGILVMREPGMEVVRTRWVFAWKG--DG---RAKARIAAKGFDQTFGVSYSESFSPTLKMTSLRLFLHLCVEYGLDIFMDDVVAAFISSELGEDEVYLEVPEGFVCPPGYVLHLRAPVEGLKQASAKWTRKIDGIMTTQGFQPVAMGLETCLYDKVEDGIPCFVARYVDDTATGVQPSQHHIYAGLIEALEAEGLELHKLGNLIGQKLLGIQVRAKPGTNHLILDQRDYILATVEKFPEVKAHKPVDVPM--DPRLDLFEEGSLMQEPRQYQSLIGALTWLTCCTAPTLATAVNRLAQFLVAPTEMHWAAALAVLAYAHQHLDEMELEIGGGGLELRGYADADFAPDRDR-KSTSGYVFFIGHTTLSWASRKQKGVVLHSTHAELNALLEGGKEALHLRQLCGFLLILLQRDGFPPTIIHQDNLSCVGLAEKGRLSSLTKHIDIKDLWIKQ 2817
            AST  R  L   HR  GH++Y+ +  M + GAV G+  +     P+  C  C+QGK  +A   S+ S+T  ++  + +  DLH P   ++  LGG   FA   DD +  + V LL++K    A +KE  A ++    + ++  H   +         F+AYL+ EG   + T+      N  AE A +++    R M   A LPD+YW +A+L+AAHI+N +  +     TP E + G+ P+L  L  FGC       +   K  +K+  R     +LG   +    +V+++  TG+ + SR VVF+E      A     V + D         DT       +     K  V F+     EPE + P + P                      + Q   L  DPD           + RRS R R +P   Y      G   + A  E     +  +   P    PQSF +A++ PD+++W  AM+ +M   ++  +   V R     VV+ RWVF +K   DG   R KAR+ AKGF Q  GV Y+E  SP     SLR  L +     L++   DV  AF+  EL E E+Y+E PEGFV   G V  LR  + GLKQA+  +  ++  I+   GF+          Y +  + +   +A   D    G   S    +   I+A  A+ LE+  LG    +  +GI++     T  L + QR YI   + +F  +   KP   PM   P L   +E ++  +  +YQ LIG+L +    T   +A A   LAQ    P + HW AA  VL Y +  +D   +      LELRGY DAD+A D+   +ST+G+ FF+    ++++SRKQ  + L ST AE  A     +E + +RQ    L +L +     PT +  DN S + LA+       TKHI +K  +I++
Sbjct:  490 ASTVARADLPTWHRRLGHLSYEYVLRMVRKGAVEGMDIIGSRSPPSEKCGPCLQGKQTRAPFTSSESNT--SEILELLHSDLHGPTAVQA--LGGISYFAVTIDDKSRKIFVHLLRNKSEYPARFKELKASIENLTGKKIK--HLRTDGGGEYASNAFEAYLRSEGIQHQKTEADSSPSNGVAERAIRTLNDQQRAMRFDANLPDKYWGYAILHAAHIWNVTPKKRLDGRTPNEVFSGKIPNLSGLRTFGCKAWARVPD---KMRTKLQARSLECHYLGYAPNRKA-HVLVHRPTGRILTSRDVVFDEG-----ANYCQRVVFED--------NDTGTLDEDEETEPTHKLTVDFS---PDEPETQTPSEHPESXXXXXXXXXXXXXXXXXXXXEIQNQILDLDPDP---------PQPRRSGRER-RPPERYGAPV--GASTRLATSEGIEDALTVMMESP----PQSFQEAMNRPDANLWLAAMLLEMKSIEQHKVWTRVDRPTNKNVVKCRWVFDYKRGPDGEILRYKARLVAKGFSQRPGVDYTEISSPVAAADSLRTLLSIVAALELELLQIDVKTAFLHGELDE-EIYMEQPEGFVEGRGQVWELRKAIYGLKQAARAFYLRLKSILEQMGFKRCETD-HAVFYRRDGEELAIILAHVDDMLLAGTSLS----FLETIKADLAKHLEIVDLGE--AKMFVGIEIERNRSTGTLKISQRRYINDILARFG-MTGCKPCATPMAESPNLPKLDESTI--DRTRYQQLIGSLMYAMISTRADIAYATGLLAQHAANPGKEHWDAAHRVLRYLNSSIDLGIIYHRSDNLELRGYVDADYAGDKSSSRSTTGWAFFLAGGLIAYSSRKQPTISLSSTEAEYVATSSAARELIWIRQFISELGLLPEG----PTTVFSDNQSSIALAKNPANHQNTKHIRVKYHFIRE 1380          
BLAST of mRNA_H-akashiwo_Contig117.20.1 vs. uniprot
Match: A0A1W7R6G9_AEDAL (Putative pol polyprotein (Fragment) n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A1W7R6G9_AEDAL)

HSP 1 Score: 309 bits (792), Expect = 1.410e-86
Identity = 282/958 (29.44%), Postives = 440/958 (45.93%), Query Frame = 1
Query:   22 DILKHLHRVFGHVAYDRLRMMQKSGAVIGLSDLPEVEMPAN--GCDTCMQGKAEKASMASTSSSTRAAQPADEIWFDLHFPKVKKSKTLGGYYCFASITDDATGYLKVKLLKSKDGAGAAYKEYSAMVKAQYRRVVRIFHHGDNDPVTLGDGKFQ-----AYLKQEGTHPEPTDVGEPRMNARAEAAGKSVMRMARCMILGARLPDRYWPFAVLYAAHIYNCSTHEDHGTVTPYEGWHGRKPDLGHLHAFGCFCVVTKLERKQKASSKMAPRGDPGIFLGIDESFPPKYVVLNGTTGKEIRSRSVVF---NENIFTGLARGDLWVAY---------RDLVDGIEAVTDTPGRMPRPQRRSQQKKHVS---FAGPEAGEPELRAPQRPLQQEEAGSMVPNDPEEEEAEPGDQKGALAFDPDLIAAAEGKPRSEERRSARLRGKPRPNYSGKTTRGDRAKEAAVEQFCGLMAAVEAGPEKITPQSFYQAIDGPDSDVWAKAMMEQMTKWQKRGIGILVMREPGMEVVRTRWVFAWKGDG-----RAKARIAAKGFDQTFGVSYSESFSPTLKMTSLRLFLHLCVEYGLDIFMDDVVAAFISSELGEDEVYLEVPEGFVC-PPGYVLHLRAPVEGLKQASAKWTRKIDGIMTTQGFQPVAMGLETCLYDKVEDGIPCFVARYVDDTATGVQPSQHHIYAGLIEALEAEGLELHKLGNLIGQKLLGIQV-RAKPGTNHLILDQRDYILATVEKFPEVKAHKPVDVPMDPRLDLFEEGSLMQEPRQ--YQSLIGALTWLTCCTAPTLATAVNRLAQFLVAPTEMHWAAALAVLAYAHQHLDEMELEIGGGGLELRGYADADFAPD-RDRKSTSGYVFFIGHTTLSWASRKQKGVVLHSTHAELNALLEGGKEALHLRQLCGFLLILLQRDGFPPTIIHQDNLSCVGLAEKGRLSSLTKHIDIK 2799
            D L   HR+ GH   D ++ +++ G   G+    ++E   +   C+ C++GK  +      S   ++ QP D I  D+  P   ++ T GG   F ++ DD + Y  V  LK K       +EY   VK  + R  ++             G++Q      Y +QEG   + T    P+ N  +E   +S++ MARCMIL A+LP++YW  AV  A ++ N    +   + TPYE W G KPDL HL  FG +  V     K+   SK   +    +F+G        Y  ++  T K   SR   F    E   T  ++G + V+Y         RD  D I  VT     +P P        H S   + G +  E +    +   ++++    + +D                 +  L  A EG+          + G P    S + T+G      A ++F  +    E       P+SF +A+  P+ D W +AM E++    +     +V      + V  +WV+  K DG     + KAR+ A+GF Q +G  Y E F+P  K T++R  L +     L +   DV +A++  EL E+ +Y+  P GF     G V  LR  + GLKQA   W RKI  ++ + G+ P     + CL+ K + G   F+  YVDD     Q      Y  ++  L+    +L  LG++     LGI++ R + G  H +LDQ  YI     KF +  A +P  +PMDP     ++      PR+  +QSL+GAL ++   T P +A + + L + +  PT+  W  A   L Y     D ++LE+GG G +L  + DAD+A D RDRKS SG++F +G   +SWA+RKQ+ + L ST AE  AL E  +E L L++L    +  ++     P I+ +DN SC+ +      S  TKHID +
Sbjct:  119 DCLHTWHRILGHREPDAIQALERKGLATGI----QIEDCGHYVTCECCLEGKMARLPFPKRSRK-KSKQPLDIIHTDVCGPM--QTPTPGGCRYFLTMIDDHSRYTVVYFLKKKSEVTERIQEYVQYVKNLFGRAPKVIRSDQG-------GEYQNEALDRYCRQEGITQQFTTAYTPQQNGVSERKNRSLVEMARCMILDAQLPNKYWAEAVNTATYVQNRLPTKPIPS-TPYEIWTGEKPDLSHLKIFGSWAYVWIPSEKR---SKFQAKSKKMLFVGYSLQHKA-YRFIDPETHKLTTSRDCRFLTHREVRETEPSQGSI-VSYPFSEISPMNRDKPDEIPDVT-ADDDVPIPVD------HTSDDDWDGDDCSEDDFHGFETANEEDDQDDTIRSDD-------------TVIEQHLPLAIEGQDE--------ISGTPDVRRSNRATKG-----IAPQRFMTVQEYCE-------PRSFEEAMRCPERDFWKRAMEEEIQSLHENATWEVVPLPKDRKTVGCKWVYKRKTDGDGNVIQYKARLVAQGFSQRYGTDYDEVFAPVAKQTTVRTLLSIAARRKLQVKHVDVKSAYLYGEL-EETIYMRQPTGFQTGAKGDVCLLRKSLYGLKQAGRIWNRKITEVLRSLGYLPAEA--DPCLFVKKQRGQLSFILLYVDDMLIACQDDGE--YNRIVNTLKMH-FKLTTLGDV--NNYLGIRIERGQDG--HFLLDQSAYIRKIAAKFGQADA-RPSHIPMDPGYPKLQQKEEEPMPRKDDFQSLVGALLYVAVNTRPDIAISTSILGRKVSNPTQADWTEAKRTLRYLKSTAD-LKLELGGPG-QLEAHVDADWAGDHRDRKSNSGFIFHLGGP-ISWAARKQQCISLSSTEAEYVALAEACQELLWLQKL----MKDVEERPNGPIIVREDNQSCIAMLRTEGGSRRTKHIDTR 998          
BLAST of mRNA_H-akashiwo_Contig117.20.1 vs. uniprot
Match: A0A0A1XLZ7_ZEUCU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Dacini TaxID=43871 RepID=A0A0A1XLZ7_ZEUCU)

HSP 1 Score: 293 bits (750), Expect = 9.880e-80
Identity = 268/937 (28.60%), Postives = 432/937 (46.10%), Query Frame = 1
Query:   22 DILKHLHRVFGHVAYDRLRMMQKSGAVIGLSDLPEVEMPAN-GCDTCMQGKAEKASMASTSSSTRAAQPADEIWFDLHFPKVKKSKTLGGYYCFASITDDATGYLKVKLLKSKDGAGAAYKEYSAMVKAQYRRVVRIFHHGDNDPVTLGDGKFQAYLKQEGTHPEPTDVGEPRMNARAEAAGKSVMRMARCMILGARLPDRYWPFAVLYAAHIYNCSTHEDHGTVTPYEGWHGRKPDLGHLHAFGCFCVVTKLERKQKASSKMAPRGDPGIFLGIDESFPPKYVVLNGTTGKEIRSRSVVFNENIFTGLARGDLWVAYRDLVDGIEAVTDTPGRMPRPQRRSQQKKHVSFAGPEAGEPELRAPQRPLQQEEAGSMVPNDPEEEEAEPGDQKGALAFDPDLIAAAEGKPRSEERRSARLRGKPRPNYSGKTTRGDRAKEAAVEQFCGLMAAVEAGPEKITPQSFYQAIDGPDSDVWAKAMMEQMTKWQKRGIGILVMREPGMEVVRTRWVFAWKG--DG---RAKARIAAKGFDQTFGVSYSESFSPTLKMTSLRLFLHLCVEYGLDIFMDDVVAAFISSELGEDEVYLEVPEGFVCP--PGYVLHLRAPVEGLKQASAKWTRKIDGIMTTQGFQPVAMGLETCLYDKVEDGIPCFVARYVDDTATGVQPSQHHIYAGLIEALEAEGLELHKLGNLIGQKLLGIQVRAKPGTNHLILDQRDYILATVEKFPEVKAHKPVDVPMDPRLDLF--EEGSLMQEPRQYQSLIGALTWLTCCTAPTLATAVNRLAQFLVAPTEMHWAAALAVLAYAHQHLDEMELEIGGGGLELRGYADADFAPDR-DRKSTSGYVFFIGHTTLSWASRKQKGVVLHSTHAELNALLEGGKEALHLRQLCGFLLILLQRDGFPPTIIHQDNLSCVGLAEKGRLSSLTKHIDIK 2799
            D++K  H  FGH+ +  LR +     V GL     + +P +  C  CM  K  +   ++  S   AA     +  D+  P    S  +GG   F +  DD T Y+ V  L+ K      +KE+ AM + Q    ++I    DN    + +  F  YLK  G   + T    P+ N  AE   ++++ MARCM+LGA L    W  AV  +A++ N S  +   +VTPYE WHG KP + HL AFG F V   L+++Q+   K  P+G   + +G  ++    Y + +    + I SR V F E             A  D+++ I  +     +M +          V  A   A E E+          + G M P   +++   P D+  +L   P       G+P+        + G+P+  Y+                    ++ +  G  K+ P +  +A+    S  W  AM  +     K     LV      + VR +WVFA K   DG   R KAR+ AKG  Q +GV+Y+E+FSP ++  ++R+   +  EY L +   DV  A+++S+L ED +Y+  PE FV    P + L L+  + GLKQ+  +W  K+D I+   GF+      E C+Y   +      +A YVDD       S  + +  LI+A+ +  +E+   G +  Q  L ++V     T  + + Q+ +I   + ++ E++  +P+ +P+DP   +   E+     +  QYQSLIG+L +L  CT P +  +V +LAQ    P   H +AA  +L +     D M+L+    G  +  + D+D+  D  DRKS +G    +     S+  +KQ  + L ST AE  AL    KEA++L+QL    L  ++ +     I++ DNLS + L +     + +KHIDIK
Sbjct:  413 DVMKW-HNRFGHLNFASLRQLSNKQMVFGLP----INIPTDVNCALCMSSKCTQRPYSN--SQNYAADVLGVVHTDVCGPVNVAS--IGGARYFLTFMDDKTRYIFVYFLRHKSEVFEKFKEFKAMAERQTGEKLKILR-SDNGTEFVNN-IFDEYLKANGILRQLTVPYTPQQNGAAERLNRTLLEMARCMLLGAGLEQSLWGEAVSTSAYLRNRSPTKALDSVTPYEAWHGHKPTVAHLRAFGSFAVA--LDKRQR--DKFKPKGKEYVMVGYSDTSKA-YRLYDKEAKRLIVSRDVYFIEQT----QHKQQHEAILDVLNPINVLVSDNEQMAQVPVIQ-----VDEANDNANEDEV---------VDDGGMQPEKSDDDFESPEDEPTSLKRGP-------GRPKLIR---TGVCGRPKKQYN-------------------YLSLLTYGNIKV-PDTVGEALSSELSGDWYNAMKAEYESLLKNKTWELVKLPRDQKPVRNKWVFAVKRNKDGNVERFKARLVAKGCSQIYGVNYTETFSPVVRYNTIRMIFAIAAEYRLHLHQMDVSTAYLNSDLSED-IYMNQPEMFVDKRYPDHCLKLKKALYGLKQSGRQWNMKLDSILKQIGFKQCEC--EPCVYVMHKGKQLNIIAVYVDDLLIA---SSDYSHLKLIKAMISNKVEVVDKGQV--QHFLSMEVERDGETGAIAISQKGHIKRLLREY-EMENCRPIAIPLDPGHQVMCNEQNCKKADQVQYQSLIGSLMYLAVCTRPDILHSVCKLAQRNNDPHVEHLSAAKRILRFLCTTQD-MQLKYNKTGKPIECFVDSDWGGDTGDRKSYTGDAVMLAGGVFSYECKKQTTIALSSTEAEYMALACVVKEAVYLKQL----LTEMELECPDAMIVNGDNLSAMNLVKNPVYHARSKHIDIK 1271          
BLAST of mRNA_H-akashiwo_Contig117.20.1 vs. uniprot
Match: A0A0P6JS54_AEDAE (Putative pol polyprotein (Fragment) n=2 Tax=Aedes aegypti TaxID=7159 RepID=A0A0P6JS54_AEDAE)

HSP 1 Score: 289 bits (740), Expect = 2.160e-78
Identity = 263/936 (28.10%), Postives = 407/936 (43.48%), Query Frame = 1
Query:   40 HRVFGHVAYDRLRMMQKSGAVIGLSDLPEVEMPANGCDTCMQGKAEKASMASTSSSTRAAQPADEIWFDLHFPKVKKSKTLGGYYCFASITDDATGYLKVKLLKSKDGAGAAYKEYSAMVKAQYRRVVRIFHHGDNDPVTLGDGKFQAYLKQEGTHPEPTDVGEPRMNARAEAAGKSVMRMARCMILGARLPDRYWPFAVLYAAHIYNCSTHEDHGTVTPYEGWHGRKPDLGHLHAFGCFCVV-------TKLERKQKASSKMAPRGDPGIFLGIDESFPPKYVVLNGTTGKEIRSRSVVFNENIFTGLARGDLWVAYRDLVDGIEAVTDTPGRMPRPQRRSQQKKHVSFAGPEAGEPELRAPQRPLQQEEAGSMVPNDPEEEEAEPGDQKGALAFDPDLIAAAEGKPRSEERRSARLRGKPRPNYSGKTTRGDRAKEAAVEQFCGLMAAVEAGPEKITPQSFYQAIDGPDSDVWAKAMMEQMTKWQKRGIGILVMREPGMEVVRTRWVFAWKGD-----GRAKARIAAKGFDQTFGVSYSESFSPTLKMTSLRLFLHLCVEYGLDIFMDDVVAAFISSELGEDEVYLEVPEGFVCP-PGYVLHLRAPVEGLKQASAKWTRKIDGIMTTQGFQPVAMGLETCLYDKVEDGIPCFVARYVDDTATGVQPSQHHIYAGLIEALEAEGLELHKLGNLIGQKLLGIQVRAKPGTNHLILDQRDYILATVEKFPEVKAHKPVDVPMDPRLDLFE--EGSLMQEPRQYQSLIGALTWLTCCTAPTLATAVNRLAQFLVAPTEMHWAAALAVLAYAHQHLDEMELEIGGGGLELRGYADADFAPDR-DRKSTSGYVFFIGHTTLSWASRKQKGVVLHSTHAELNALLEGGKEALHLRQLCGFLLILLQRDGFPPTIIHQDNLSCVGLAEKGRLSSLTKHIDIK 2799
            HR  GH   D ++ + +     G   L +  + +  C+ C + K  +      S + R+ QP D +  D+  P   K+ T GG   + ++TDD + Y  V  L+ K       K +   VK  + R  ++    +       +   + + K+EG   + T    P+ N  AE   +++  MARCM+L A LP +YW  AV  A+++ N         VTPYE W G KPDL H+  FG    V       TKL+   +  + +        F  +D S      V+N    + + +RS   +E                 +++     TD           S+       AG   GE         L  +E   ++ +D      E  D+        +     E   R        L        S + T+G       V  F     +  A    + P++  +A+   + + W  AM E+    Q+     +V      + +  RWVF  K D      R KAR+ A+G  Q +G  Y E ++P  K T+LR  L +     + +   D+  A+++ +L E  +Y+  P G+    P  V HLR  + GLKQA   W R I  ++   G++  A   + CL+ K +     F+  YVDD     +  +   Y  + + LE    ++  LGN+  +  LGI +  +   + L L Q  YI   + KF E++  KP  +PMDP     E  E   M    +YQSL+G L ++  CT P LA   + L + +  PTE  W  A   L Y  +   + +L++GG G  L+GYADAD+A DR DRKS SG++F +G  T+SW +RKQ+ V L ST AE  AL E  KE L L +L   L + +Q     P  IH+DN SC+ +      +  TKHID +
Sbjct:  409 HRKLGHRDNDAIQELFRKKLATG-GTLQDCGIRSI-CECCQEAKFPRLPFPQQSKN-RSKQPLDLLHVDVCGPM--KNVTPGGCRYYLTVTDDYSRYTTVFFLREKSDVEEKLKHFVMEVKTTFGRPPKVIRSDNGGE--FKNKSLETFFKKEGIRQQFTTPHTPQQNGIAERKNRTLNEMARCMLLDAGLPTKYWAEAVNTASYLQNRLPTRSL-EVTPYEAWWGEKPDLSHVQPFGTDAYVWIPKQNRTKLDAAAQKMTFVGYSTQQKAFRFLDRSSG---CVINSRDARFLPTRSSPADEE------------TNGSIIEYHFPSTDN----------SKLNSFPVVAGDVLGE---------LADDEEEEVLASDQRSNHEEGRDRNDTSIESHEDTTLTEANERPLNAPRGPLSTSTPIRVSSRATKG-------VPPFRFRETSSLATQRTMEPRTLAEALASAEREQWKTAMDEEYAAQQENSTWDIVRLPANRKPIGCRWVFQKKFDEHGKVARYKARLVAQGCSQKYGTDYDEVYAPVAKHTTLRALLTIAARQKMQVKHVDIKTAYLNGKLSET-IYMRQPPGYESGNPDDVCHLRRSLYGLKQAGRVWNRTITDVLKELGYE--ATEADNCLFTKTDGS--SFILLYVDDMLIVTKEDKE--YERVRKHLE-RNFKISCLGNV--KNYLGIHIERQEDGSFL-LSQESYIERMLFKF-EMEQAKPSPIPMDPGYVTAEQKEEKKMATAEKYQSLVGGLLYVAVCTRPDLAITASILGRKVSKPTESDWTEAKRALRYL-KGTAKQKLKLGGSG-NLKGYADADWAGDRTDRKSNSGFLFKLGEGTISWTARKQECVTLSSTEAEYVALAEASKELLWLLKLMRGLGLDIQH----PVTIHEDNQSCISMLSAEGGTRRTKHIDTR 1277          
BLAST of mRNA_H-akashiwo_Contig117.20.1 vs. uniprot
Match: A0A8H8M6H5_9AGAM (Copia-like polyprotein/retrotransposon n=1 Tax=Ceratobasidium sp. AG-Ba TaxID=170446 RepID=A0A8H8M6H5_9AGAM)

HSP 1 Score: 289 bits (740), Expect = 6.990e-78
Identity = 273/951 (28.71%), Postives = 428/951 (45.01%), Query Frame = 1
Query:    4 ASTPVRDILKHLHRVFGHVAYDRLRMMQKSGAVIGLSDLPEVEMPANGCDTCMQGKAEKASMASTSSSTRAAQPADEIWFDLHFPKVKKSKTLGGYYCFASITDDATGYLKVKLLKSKDGAGAAYKEYSAMVKAQYRRVV-RIFHHGDNDPVTLGDGKFQAYLKQEGTHPEPTDVGEPRMNARAEAAGKSVMRMARCMILGARLPDRYWPFAVLYAAHIYNCSTHEDHGTVTPYEGWHGRKPDLGHLHAFGCFCVVTKLERKQKASSKMAPRGDPGIFLGIDESFPPK---YVVLNGTTGKEIRSRSVVFNENIFTGLARGDLWVAYRDLVDGIEAVTDTPGRMPRPQRRSQQKKHVSFAGPEAGEPELRAPQRPLQQEEAGSMVPNDPEEEEAEPGDQKGALAFDPDLIAAAEGKPRSEERRSARLRGKPRPNYSGKTTRGDRAKEAAVEQFCGLMAAVEAGPEKITPQSFYQAIDGPDSDVWAKAMMEQMTKWQKRGIGILVMREPGMEVVRTRWVFAWKGDG-----RAKARIAAKGFDQTFGVSYSESFSPTLKMTSLRLFLHLCVEYGLDIFMDDVVAAFISSELGEDEVYLEVPEGFVCPPGYVLHLRAPVEGLKQASAKWTRKIDGIMTTQGFQPVAMGLETCLYDKVEDGIPCFVARYVDDTATGVQPSQHHIYAGLIEALEAEGLELHKLGNLIGQKLLGIQVRAKPGTNHLILDQRDYILATVEKFPEVKAHKPVDVPMDPRLDLFEEGSLMQEPRQYQSLIGALTWLTCCTAPTLATAVNRLAQFLVAPTEMHWAAALAVLAYAHQHLDEMELEIGGGGLELRGYADADFAPDRDR-KSTSGYVFFIGHTTLSWASRKQKGVVLHSTHAELNALLEGGKEALHLRQLCGFLLILLQRDGFPP---TIIHQDNLSCVGLAEKGRLSSLTKHIDIKDLWIKQ 2817
            A+T  R  L   HR FGH+ Y+ +  M + GAV G+  +     P + C  C+QGK  +A   S+ S  R ++  + +  DLH P   ++  LGG   FA   DD +  + V LL++K      +K+  A V+    + + R+   G  +    G   F+A+L   G   + T+      N  AE A +++    R M   A+LP+++W +A+L+AAH++N +        TP E + G  P++  L  FGC       +  +   +K+  R     +LG    F P    +++L   TG+   SR VVF+E      A     V   D    ++   D     P+P R S  +  V+   PE    E   P  P    E     P +  E      + +  +A DPD             RRS R+R +P   Y      G  A+ AA +    L A +E+ PE     +F +A+  PD+++W +AM+E++   ++  +  LV R  G  +V+ RWVF +K D      R KAR+  KGF Q  GV Y E  SP     SLR  L +     L++   DV  AF+ +EL E+E+++E P GF      V  L   + GLKQA+  +   +  I+   GF       +  ++   E      +  +VDD       +    +   I++  AE LE+  LG    +  +GI++        L + QR YI   + +F  +   K  D PM   L L +  S   +   YQ L+G+L +    T   +A     LAQ+   P + HW A   VL Y     +   +      L+L GY DAD+A D++  +ST+G+ F +    ++++SRKQ  + L ST AE  A     +E + +RQ    L       GF P   T +  DN S + LA+       TKHI +K  +I++
Sbjct:  657 ATTVARADLPTWHRRFGHLNYEYVLDMVRKGAVEGMDIVGSRSPPESKCAPCLQGKQTRAPFPSSES--RTSEVLELLHSDLHGPLPVQA--LGGIRYFAVTIDDKSRKIFVHLLRNKSDYPGYFKQLKASVENLTGKTIKRLRTDGGGE---YGSNAFEAFLSSAGIQHQKTEADSSASNGVAERAIRTLNDCQRAMRFDAQLPEKFWGYAILHAAHLWNITPKRRLNGRTPNEIFSGTIPNVSGLRTFGCKAWARVPDSMR---TKLQARSFECNYLG----FAPNRKAHILLQRGTGRVFTSRDVVFDEG-----ADNRQRVIIEDNDGSLDDDDD-----PKPDRMSPVRITVN---PEKTPEEPPEPSEPEHIPEVLGEPPTESSEGSDSEPEVEEIVALDPDTPII---------RRSTRVR-RPPERYGAPV--GAMAQLAACDTEQALNAMLESPPE-----TFQEAMRRPDANLWLEAMIEELKSIEQHQVWTLVDRPVGKNIVKCRWVFDYKRDSDGEIIRHKARLVGKGFSQRPGVDYVEISSPVAAADSLRTLLSIVAALDLELLQIDVKTAFLHAEL-EEEIFMEQPPGFSEGAMSVWKLNKAIYGLKQAARAFYLCLKAILENIGFH--RCDTDHSVFWLREGDELAIILGHVDDMLLAGTSTA---FLEKIKSKIAESLEIVDLGE--AKMFVGIEIERDRSAGTLKISQRRYINDILARFG-MSDCKTCDTPMAESLYLPKLDSPSIDRTLYQQLVGSLMYAMISTRADIAFPTGLLAQYAANPGKEHWDAGKRVLRYLKGTSNLGIVYHRSSDLKLLGYVDADYAGDKNTSRSTTGWAFLLAGGVIAYSSRKQPTISLSSTEAEYVADASAARELIWIRQFLSEL-------GFLPEGATPLLSDNQSAMALAKNPINHQTTKHIRVKYHFIRE 1547          
BLAST of mRNA_H-akashiwo_Contig117.20.1 vs. uniprot
Match: A0A060SPD4_PYCCI (Integrase catalytic domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SPD4_PYCCI)

HSP 1 Score: 287 bits (735), Expect = 9.220e-78
Identity = 266/947 (28.09%), Postives = 409/947 (43.19%), Query Frame = 1
Query:   37 LHRVFGHVAYDRLRMMQKSGAVIGLSDLPEVEMPANGCDTCMQGKAEKASMASTSSSTRAAQPADEIWFDLHFPKVKKSKTLGGYYCFASITDDATGYLKVKLLKSKDGAGAAYKEYSAMVKAQYRRVVRIFHHGDNDPVTLGDGKFQAYLKQEGTHPEPTDVGEPRMNARAEAAGKSVMRMARCMILGARLPDRYWPFAVLYAAHIYNCSTHEDHGTVTPYEGWHGRKPDLGHLHAFGCFCVVTKLERKQKASSKMAPRGDPGIFLGIDESFPPKYVVLNGTTGKEIRSRSVVFNENIFTGLARGDLWVAYRDLVDGIEAVTDTPGRMPRPQRRSQQKKHVSFAGPEAGEPELRAPQRPLQQEEAGSMVPNDPEEEEAEPGDQKGALAFDPDLIAAAEGK----------PRSEERRSARLRGKPRPNYSGKTTRGDRAKEAAVEQFCGLMAAVEAGPEKITPQSFYQAIDGPDSDVWAKAMMEQMTKWQKRGIGILVMREPGMEVVRTRWVFAWKGDG-----RAKARIAAKGFDQTFGVSYSESFSPTLKMTSLRLFLHLCVEYGLDIFMDDVVAAFISSELGEDEVYLEVP--EGFVCPPGYVLHLRAPVEGLKQASAKWTRKIDGIMTTQGFQPVAMGLETCLYDKVEDGIPCFVARYVDDTATGVQPSQHHIYAGLIEALEAEGLELHKLGNLIGQK-LLGIQVRAKPGTNHLILDQRDYILATVEKFPEVKAHKPVDVPMDPRLDLFEEGSLMQEPRQ--------YQSLIGALTWLTCCTAPTLATAVNRLAQFLVAPTEMHWAAALAVLAYAHQHLDEMELEIGGGGLELRGYADADFAPDRDRKSTSGYVFFIGHTTLSWASRKQKGVVLHSTHAELNALLEGGKEALHLRQLCGFLLILLQRDGFPPTIIHQDNLSCVGLAEKGRLSSLTKHIDIK 2799
            LHR  GH+A +  R M   G V GL  L E++ P   C++C  GK  +  +A+     RA +   E+  D+  P     +TLG    +   TDD + Y  + L+++KD A   Y++  A    Q    +   H  D     L   +F   L ++GT  + T    P  N  AE   ++VM   R M+  ARLP   W  A L+A ++ N +        TPYE + G+KP+L HLH +GC   V          SK++PR D   ++G D       +          + RSV    +IF      D+ V      +G+    D     P           +S +      PE+  P  P+ +E A   V     + E     +    +     + A EG           PR  +  +AR+                  +E  VE     MAA     E + P S+ +A   PD   W +A+  ++      G   +V R     VV ++WV   K +      + KAR+ A+GF Q +GV Y ++F+P  K++S+RL L +    G      D  +A+++S+L ED VYLE P    F     +VL L   + GLKQ   KW   +   +   GF  V    +  ++ K E      +A +VDD        +      L++  +++   ++K+ +L     LLGI++        L L Q  YI A + +F      KPV +PMDP   L  +    + P +        Y+  IGAL +    T P +A AV+ LAQF   P + HW A   +  Y       + L  GG   EL GY +AD A    R++ +GYVF +    +SWAS+KQ+ V L +  +E  A     KEA+ LR+L G +   L       T+++ DN + + L + G   + TKHID++
Sbjct:  366 LHRELGHIAPEAAREMVTKGHVEGLV-LSELDGPVADCESCAAGKMTRKPIAAERVRPRATEVGGEVHADVWGPS--PVETLGRRRYYILYTDDYSRYCSLYLMRTKDEAIETYRKVRAFYSTQKGARICCLH-SDRGGEFLST-EFSKLLAEDGTIRKFTAHDTPEYNGVAERGNRTVMERVRAMLHDARLPQMLWGEAALHAVYLKNRTATRSLEGRTPYEAFWGKKPNLAHLHVWGCRVWV-----HSPGGSKLSPRADDARWVGFDTESDAHRIYWP-------KRRSVTVERSIFFPETDSDVEVRLEGENEGVSTHLDERVTSPS----------LSNSSVRPIPPEISDPPTPIVEERAPEPVGRATSQGEVRQSTRVRKESAYVRRLKAGEGTVSGRTGGPVLPRGLQEGTARIEEVNEDEQVEIVAMVQETEEDVVEL---AMAAAMGDAECVEP-SYAEAKKRPDWPKWQEAIKAELDSLVANGTWRIVPRPSSGNVVDSKWVLRVKKNAAGEIDKYKARLVARGFTQVYGVDYYDTFAPVAKLSSIRLLLAIAARNGWAADSFDFNSAYLNSKLDED-VYLEQPPDHAFADRKAFVLKLEKALYGLKQGGRKWYETLCAALGRLGFTRVEA--DWGVFYKHEGEHLIVLAVHVDDCLLTGSSRR------LLDDTKSKIGTVYKITDLGPVSWLLGIKISCDLEAGTLSLSQHAYIEALLARFNFTDL-KPVSMPMDPH-QLLSKTQCPESPAEVARMRRVPYREAIGALMYAALGTRPDIAFAVSTLAQFAQNPGQPHWDAVKRIFRYL-LGTRTLSLIYGGQQRELEGYVNADGATQEHRRAITGYVFLVDGGAVSWASKKQELVTLSTAESEYVAATHAAKEAIWLRRLIGEVFGPLSN----ATMLYSDNQAAIALTKDGSYHARTKHIDVR 1265          
BLAST of mRNA_H-akashiwo_Contig117.20.1 vs. uniprot
Match: A0A8H8NTR4_9AGAM (Copia-like polyprotein/retrotransposon n=1 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A8H8NTR4_9AGAM)

HSP 1 Score: 288 bits (738), Expect = 1.310e-77
Identity = 259/950 (27.26%), Postives = 425/950 (44.74%), Query Frame = 1
Query:    4 ASTPVRDILKHLHRVFGHVAYDRLRMMQKSGAVIGLSDLPEVEMPANGCDTCMQGKAEKASMASTSSSTRAAQPADEIWFDLHFPKVKKSKTLGGYYCFASITDDATGYLKVKLLKSKDGAGAAYKEYSAMVKAQYR-RVVRIFHHGDNDPVTLGDGKFQAYLKQEGTHPEPTDVGEPRMNARAEAAGKSVMRMARCMILGARLPDRYWPFAVLYAAHIYNCSTHEDHGTVTPYEGWHGRKPDLGHLHAFGCFCVVTKLERKQKASSKMAPRGDPGIFLGIDESFPPKYVVLNGTTGKEIRSRSVVFNENIFTGLARGDLWVAYRDLVDGIEAVTDTPGRMPRPQRRSQQKKHVSFAGPEAGEPELRAPQRPLQQEEAGSMVPNDPEEEEAEPGDQKGALAFDPDLIAAAEGKPR-SEE----RRSARLRGKPRPNYSGKTTRGDRAKEAAVEQFCGLMAAVEAGPEKITPQSFYQAIDGPDSDVWAKAMMEQMTKWQKRGIGILVMREPGMEVVRTRWVFAWK--GDG---RAKARIAAKGFDQTFGVSYSESFSPTLKMTSLRLFLHLCVEYGLDIFMDDVVAAFISSELGEDEVYLEVPEGFVCPPGYVLHLRAPVEGLKQASAKWTRKIDGIMTTQGFQPVAMGLETCLYDKVEDGIPCFVARYVDDTATGVQPSQHHIYAGLIEALEAEGLELHKLGNLIGQKLLGIQVRAKPGTNHLILDQRDYILATVEKFPEVKAHKPVDVPMDPRLDLFEEGSLMQEPRQYQSLIGALTWLTCCTAPTLATAVNRLAQFLVAPTEMHWAAALAVLAYAHQHLDEMELEIGGGGLELRGYADADFAPDRDR-KSTSGYVFFIGHTTLSWASRKQKGVVLHSTHAELNALLEGGKEALHLRQLCGFLLILLQRDGFPPTIIHQDNLSCVGLAEKGRLSSLTKHIDIKDLWIKQ 2817
            A T  R  L   HR  GH+ Y+ +  M + GA  G+  +     P + C  C++GK  ++   +  S+  A++  + +  DLH P   ++  +GGY  F+   DD +  + V LLK K+   A ++E  A ++ Q   R+V +   G  +       +F+ ++K +G   + T+      N  AE   +++    R M   A LP +YW +A+L++A ++N +     G  TP E + GRKP++  L  FGC         K+   +K+ P+     +LG   +     +V+  +TGK   SR VVF+E    G  R  + +   D ++  E V++  G   +P+                                    V ++ EE+E             PD++   + +P  S E    RRS R+  +P   Y        R   ++  ++    AA++       P++F +A+   DS +W +AM+E++    K  + +   R  G  +V   WV+++K   DG   R KAR+ AKG+ Q  G+ YSE  SP     + R+ L L     L++   D+  AF+   L E E+Y+E PEGF      V  L   + GLKQA+  +  ++  ++   GF       +  ++ K ++     +  +VDD     +P     Y   I++   E  EL  LG    +  +G+++        L + Q+ YI   + +F  +   K  + PM   LDL +  S   +   YQ L+G+L +    T P +A A   LAQ    P + HW A   VL Y         +  G    +L GY DADFA D++  +ST+G+VF I    ++W+SRKQ  + L ST AE  A     +E + +RQ  G +           TI+H DN S + LA        TKHI IK  +I++
Sbjct: 1473 AGTVARADLSTWHRRLGHLNYEYVLDMVRKGAADGMDIIGSRIPPKSPCPPCVKGKQTRSPFPT--STNHASKCLELLHSDLHGPVAVEA--IGGYRYFSVTIDDKSRKMFVHLLKHKNEFPARFRELVASLENQTGDRIVSLRTDGGGEYCL---DEFEGWMKSKGIGHQKTEADSSSSNGVAERGIRTMGDFDRTMREDANLPAKYWGYAILHSALLWNVTPKSFLGGKTPEEVFSGRKPNVSRLRTFGCKAWARVPNNKR---TKLQPKSIECTYLGYAPNRKAHLLVIC-STGKIFTSRDVVFDEG---GETRQRIIIEDDDDLENAEEVSEKVGESEKPEN-----------------------------------VRDEVEEQE-------------PDVLTRVDDEPLISNEPPPTRRSTRI-SRPPARYGSNVGGSARIAMSSDWEYKSAFAALKMDD---APRNFKEAMSRDDSHLWMQAMIEEIDSITKHRVWMATQRPSGKNIVGCMWVYSYKLGPDGEIVRYKARLVAKGYSQQPGIDYSEISSPVAASDAFRILLALTTLGNLELLQLDIKTAFLHGNLDE-EIYMEQPEGFDDGSENVWRLVKALYGLKQAARAFYLRLKEVLEGIGFTRCES--DYAVFIKQDENNLAIILAHVDDMLLAGKPLT---YLEEIKSKLRESFELVDLGE--AKMFVGVEIERDRNEGTLKISQKQYINDILTRFG-MSDCKSCETPMAESLDLPKLDSPTIDRTHYQRLVGSLMYAMISTRPDIAFATGLLAQHAANPGDEHWLAGKRVLRYLQGTKSVGIIYRGSEVKDLEGYVDADFAGDKNSSRSTTGWVFRIAGGCVAWSSRKQSTISLSSTEAEYVAASSAARELIWIRQFLGEI----NHRSNDATILHTDNQSSMALARNPSNHQNTKHIRIKYHFIRE 2343          
BLAST of mRNA_H-akashiwo_Contig117.20.1 vs. uniprot
Match: A0A8H8NI06_9AGAM (Copia-like polyprotein/retrotransposon n=2 Tax=Ceratobasidium sp. AG-Ba TaxID=170446 RepID=A0A8H8NI06_9AGAM)

HSP 1 Score: 287 bits (735), Expect = 1.470e-77
Identity = 270/951 (28.39%), Postives = 428/951 (45.01%), Query Frame = 1
Query:    4 ASTPVRDILKHLHRVFGHVAYDRLRMMQKSGAVIGLSDLPEVEMPANGCDTCMQGKAEKASMASTSSSTRAAQPADEIWFDLHFPKVKKSKTLGGYYCFASITDDATGYLKVKLLKSKDGAGAAYKEYSAMVKAQYRRVV-RIFHHGDNDPVTLGDGKFQAYLKQEGTHPEPTDVGEPRMNARAEAAGKSVMRMARCMILGARLPDRYWPFAVLYAAHIYNCSTHEDHGTVTPYEGWHGRKPDLGHLHAFGCFCVVTKLERKQKASSKMAPRGDPGIFLGIDESFPPK---YVVLNGTTGKEIRSRSVVFNENIFTGLARGDLWVAYRDLVDGIEAVTDTPGRMPRPQRRSQQKKHVSFAGPEAGEPELRAPQRPLQQEEAGSMVPNDPEEEEAEPGDQKGALAFDPDLIAAAEGKPRSEERRSARLRGKPRPNYSGKTTRGDRAKEAAVEQFCGLMAAVEAGPEKITPQSFYQAIDGPDSDVWAKAMMEQMTKWQKRGIGILVMREPGMEVVRTRWVFAWKGDG-----RAKARIAAKGFDQTFGVSYSESFSPTLKMTSLRLFLHLCVEYGLDIFMDDVVAAFISSELGEDEVYLEVPEGFVCPPGYVLHLRAPVEGLKQASAKWTRKIDGIMTTQGFQPVAMGLETCLYDKVEDGIPCFVARYVDDTATGVQPSQHHIYAGLIEALEAEGLELHKLGNLIGQKLLGIQVRAKPGTNHLILDQRDYILATVEKFPEVKAHKPVDVPMDPRLDLFEEGSLMQEPRQYQSLIGALTWLTCCTAPTLATAVNRLAQFLVAPTEMHWAAALAVLAYAHQHLDEMELEIGGGGLELRGYADADFAPDRDR-KSTSGYVFFIGHTTLSWASRKQKGVVLHSTHAELNALLEGGKEALHLRQLCGFLLILLQRDGFPP---TIIHQDNLSCVGLAEKGRLSSLTKHIDIKDLWIKQ 2817
            A+T  R  L   HR FGH+ Y+ +  M + GAV G+  +     P + C  C+QGK  +A   S+ S  R ++  + +  DLH P   ++  LGG   FA   DD +  + V LL++K      +K+  A V+    + + R+   G  +    G   F+A+L   G   + T+      N  AE A +++    R M   A+LP+++W +A+L+AAH++N +        TP E + G  P++  L  FGC       +  +   +K+  R     +LG    F P    +++L   TG+   SR VVF+E               R +++  +   D     P+P R S  +  V+   PE    E   P  P    E     P +  E      + +  +A DPD             RRS R+R +P   Y      G  A+ AA +    L A +E+ PE     +F +A+  PD+++W +AM+E++   ++  +  LV R  G  +V+ RWVF +K D      R KAR+  KGF Q  GV Y E  SP     SLR  L +     L++   DV  AF+ ++L E+E+++E P GF      V  L   + GLKQA+  +   +  I+   GF       +  ++   E      +  +VDD       +    +   I++  AE LE+  LG    +  +GI++        L + QR YI   + +F  +   K  D PM   L L +  S   +   YQ L+G+L +    T   +A     LAQ+   P + HW A   VL Y     +   +      L+L GY DAD+A D++  +ST+G+ F +    ++++SRKQ  + L ST AE  A     +E + +RQ    L       GF P   T +  DN S + LA+       TKHI +K  +I++
Sbjct:  488 ATTVARADLPTWHRRFGHLNYEYVLDMVRKGAVEGMDIVGSRSPPESKCAPCLQGKQTRAPFPSSES--RTSEVLELLHSDLHGPLPVQA--LGGIRYFAVTIDDKSRKIFVHLLRNKSDYPGYFKQLKASVENLTGKTIKRLRTDGGGE---YGSNAFEAFLSSAGIQHQKTEADSSASNGVAERAIRTLNDCQRAMRFDAQLPEKFWGYAILHAAHLWNITPKRRLNGRTPNEIFSGTIPNVSGLRTFGCKAWARVPDSMR---TKLQARSFECNYLG----FAPNRKAHILLQRGTGRVFTSRDVVFDEGADN---------CQRVIIEDNDGSLDDDDD-PKPDRMSPVRITVN---PEKTPEEPPEPSEPEHIPEVLGEPPTESSEGSDSEPEVEEIVALDPDTPII---------RRSTRVR-RPPERYGAPV--GAMAQLAACDTEQALNAMLESPPE-----TFQEAMRRPDANLWLEAMIEELKSIEQHQVWTLVDRPVGKNIVKCRWVFDYKRDSDGEIIRHKARLVGKGFSQRPGVDYVEISSPVAAADSLRTLLSIVAALDLELLQIDVKTAFLHAKL-EEEIFMEQPPGFSEGAMSVWKLNKAIYGLKQAARAFYLCLKAILENIGFH--RCDTDHSVFWLREGDELAIILGHVDDMLLAGTSTA---FLEKIKSKIAESLEIVDLGE--AKMFVGIEIERDRSAGTLKISQRRYINDILARFG-MSDCKTCDTPMAESLYLPKLDSPSIDRTLYQQLVGSLMYAMISTRADIAFPTGLLAQYAANPGKEHWDAGKRVLRYLKGTSNLGIVYHRSSDLKLLGYVDADYAGDKNTSRSTTGWAFLLAGGVIAYSSRKQPTISLSSTKAEYVADASAARELIWIRQFLSEL-------GFLPEGATPLLSDNQSAMALAKNPINHQTTKHIRVKYHFIRE 1378          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig117.20.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3UVC1_HETAK3.340e-9987.93Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S4DBW5_HETAK2.880e-9689.09Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A8H8JF23_9AGAM9.130e-8930.17Copia-like polyprotein/retrotransposon n=1 Tax=Cer... [more]
A0A1W7R6G9_AEDAL1.410e-8629.44Putative pol polyprotein (Fragment) n=1 Tax=Aedes ... [more]
A0A0A1XLZ7_ZEUCU9.880e-8028.60Retrovirus-related Pol polyprotein from transposon... [more]
A0A0P6JS54_AEDAE2.160e-7828.10Putative pol polyprotein (Fragment) n=2 Tax=Aedes ... [more]
A0A8H8M6H5_9AGAM6.990e-7828.71Copia-like polyprotein/retrotransposon n=1 Tax=Cer... [more]
A0A060SPD4_PYCCI9.220e-7828.09Integrase catalytic domain-containing protein n=1 ... [more]
A0A8H8NTR4_9AGAM1.310e-7727.26Copia-like polyprotein/retrotransposon n=1 Tax=Rhi... [more]
A0A8H8NI06_9AGAM1.470e-7728.39Copia-like polyprotein/retrotransposon n=2 Tax=Cer... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig117contigH-akashiwo_Contig117:1050504..1053515 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog67593.Physo141588
PFAMsDUF4219,RVT_2,Retrotran_gag_2,gag_pre-integrs,rve,zf-CCHC
Model size2820
Max annot lvl4776|Peronosporales
Hectar predicted targeting categoryother localisation
Exons2
Evalue1.52e-79
EggNOG OGsCOG2801@1|root,KOG0017@2759|Eukaryota,3QHJF@4776|Peronosporales
Descriptiongag-polypeptide of LTR copia-type
Cds size2820
COG categoryL
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387105.6112525-CDS-H-akashiwo_Contig117:1050503..10522301681387105.6112525-CDS-H-akashiwo_Contig117:1050503..1052230Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig117 1050504..1052230 -
1681387105.6222715-CDS-H-akashiwo_Contig117:1052422..10535151681387105.6222715-CDS-H-akashiwo_Contig117:1052422..1053515Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig117 1052423..1053515 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig117.20.1prot_H-akashiwo_Contig117.20.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig117 1050504..1053515 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig117.20.1

>prot_H-akashiwo_Contig117.20.1 ID=prot_H-akashiwo_Contig117.20.1|Name=mRNA_H-akashiwo_Contig117.20.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=940bp
VASTPVRDILKHLHRVFGHVAYDRLRMMQKSGAVIGLSDLPEVEMPANGC
DTCMQGKAEKASMASTSSSTRAAQPADEIWFDLHFPKVKKSKTLGGYYCF
ASITDDATGYLKVKLLKSKDGAGAAYKEYSAMVKAQYRRVVRIFHHGDND
PVTLGDGKFQAYLKQEGTHPEPTDVGEPRMNARAEAAGKSVMRMARCMIL
GARLPDRYWPFAVLYAAHIYNCSTHEDHGTVTPYEGWHGRKPDLGHLHAF
GCFCVVTKLERKQKASSKMAPRGDPGIFLGIDESFPPKYVVLNGTTGKEI
RSRSVVFNENIFTGLARGDLWVAYRDLVDGIEAVTDTPGRMPRPQRRSQQ
KKHVSFAGPEAGEPELRAPQRPLQQEEAGSMVPNDPEEEEAEPGDQKGAL
AFDPDLIAAAEGKPRSEERRSARLRGKPRPNYSGKTTRGDRAKEAAVEQF
CGLMAAVEAGPEKITPQSFYQAIDGPDSDVWAKAMMEQMTKWQKRGIGIL
VMREPGMEVVRTRWVFAWKGDGRAKARIAAKGFDQTFGVSYSESFSPTLK
MTSLRLFLHLCVEYGLDIFMDDVVAAFISSELGEDEVYLEVPEGFVCPPG
YVLHLRAPVEGLKQASAKWTRKIDGIMTTQGFQPVAMGLETCLYDKVEDG
IPCFVARYVDDTATGVQPSQHHIYAGLIEALEAEGLELHKLGNLIGQKLL
GIQVRAKPGTNHLILDQRDYILATVEKFPEVKAHKPVDVPMDPRLDLFEE
GSLMQEPRQYQSLIGALTWLTCCTAPTLATAVNRLAQFLVAPTEMHWAAA
LAVLAYAHQHLDEMELEIGGGGLELRGYADADFAPDRDRKSTSGYVFFIG
HTTLSWASRKQKGVVLHSTHAELNALLEGGKEALHLRQLCGFLLILLQRD
GFPPTIIHQDNLSCVGLAEKGRLSSLTKHIDIKDLWIKQE
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mRNA from alignment at H-akashiwo_Contig117:1050504..1053515-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig117.20.1 ID=mRNA_H-akashiwo_Contig117.20.1|Name=mRNA_H-akashiwo_Contig117.20.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=3012bp|location=Sequence derived from alignment at H-akashiwo_Contig117:1050504..1053515- (Heterosigma akashiwo CCMP452)
GTGGCATCCACACCGGTGCGAGATATTTTGAAACACTTGCATCGAGTCTT CGGTCATGTTGCATATGACAGGCTCAGGATGATGCAGAAGAGCGGGGCAG TAATTGGACTTTCGGATTTGCCTGAAGTGGAGATGCCGGCCAATGGGTGT GATACATGTATGCAGGGTAAGGCGGAGAAAGCATCTATGGCAAGCACGAG CAGCAGTACCAGGGCGGCGCAGCCAGCTGATGAGATATGGTTTGACCTTC ACTTTCCGAAGGTGAAGAAGAGTAAGACCCTGGGCGGGTACTACTGCTTT GCCAGCATCACCGATGATGCAACTGGTTATCTTAAAGTGAAGCTGTTGAA AAGCAAAGACGGGGCCGGAGCCGCTTATAAGGAGTACAGCGCCATGGTCA AGGCCCAGTATAGAAGGGTTGTGAGGATCTTCCACCATGGTGACAATGAC CCGGTCACCCTTGGTGATGGTAAGTTCCAGGCTTATCTGAAACAGGAGGG GACTCACCCAGAGCCTACGGACGTAGGAGAACCGAGGATGAATGCCAGGG CAGAGGCTGCTGGCAAGTCGGTAATGAGGATGGCGCGCTGCATGATCTTG GGCGCTAGGCTGCCAGACAGATACTGGCCCTTTGCAGTGCTGTACGCGGC TCACATCTACAATTGCTCAACACACGAGGATCATGGCACTGTGACACCGT ATGAGGGCTGGCATGGGCGGAAGCCGGACCTCGGGCATCTGCATGCCTTC GGGTGCTTCTGTGTGGTGACAAAGCTGGAGCGGAAGCAGAAGGCCAGCAG TAAAATGGCGCCGCGCGGGGACCCTGGCATTTTTCTGGGGATTGACGAGA GTTTCCCGCCTAAGTATGTGGTTCTGAACGGGACCACGGGCAAGGAAATC AGATCCCGGTCAGTGGTCTTCAACGAGAACATCTTCACTGGCCTGGCTCG TGGTGATCTTTGGGTGGCATACAGGGACTTGGTGGATGGCATTGAGGCTG TGACTGATACACCGGGTCGCATGCCGAGGCCTCAGCGGAGGAGCCAGCAG AAGAAGCACGTCAGCTTTGCGGGGCCGGAAGCTGGGGAGCCAGGTGCGAG GCCGGCAGCTGGGGGACCTGGAGCCCGGGCGGGGCCTGCGCCGGCAGCTG GGGAGACAGGGGCACAGCCGGCGCCGGGGCCGGGGCCTGTGCCGGGGCCT GGGGCCGGGCCTGCGTTGGAGCCAGGGCCTGCGCGGGAGCTGGGACCTGC GCCGGGGCCGGGACCTGGGGCCAGGCCGACACAAGAGCTGAGGGCTCCAC AGAGACCGCTTCAGCAGGAGGAGGCCGGCTCCATGGTTCCGAATGATCCG GAGGAGGAGGAGGCGGAGCCGGGTGACCAGAAGGGAGCATTGGCTTTCGA TCCCGACCTAATTGCAGCAGCGGAGGGCAAGCCGCGGTCTGAGGAGAGAA GGTCTGCAAGGTTACGCGGGAAGCCGCGACCGAACTACTCGGGCAAGACC ACGCGCGGGGACCGAGCCAAGGAGGCGGCGGTGGAGCAGTTCTGCGGGCT GATGGCGGCCGTGGAGGCGGGACCAGAGAAGATCACCCCGCAGTCCTTCT ATCAGGCTATAGATGGGCCCGACAGTGATGTGTGGGCCAAGGCCATGATG GAACAGATGACCAAGTGGCAGAAGCGCGGCATAGGCATCCTGGTGATGCG TGAGCCTGGTATGGAGGTAGTTCGCACCCGGTGGGTTTTTGCCTGGAAAG GTGATGGGAGGGCTAAGGCGAGGATAGCAGCCAAAGGCTTCGATCAGACA TTTGGGGTCTCTTACAGTGAGTCATTTAGTCCGACGCTTAAGATGACTAG TCTGCGTCTTTTTCTGCACCTGTGTGTAGAGTATGGCCTCGACATCTTCA TGGATGATGTCGTGGCGGCTTTCATCAGCTCGGAGCTGGGCGAAGACGAG GTTTACCTGGAAGTGCCAGAGGGCTTTGTCTGCCCTCCAGGATATGTTCT TCATCTACGGGCACCGGTGGAGGGCCTGAAGCAGGCCTCAGCCAAATGGA CGCGGAAGATCGACGGCATCATGACCACACAAGGTTTCCAACCGGTGGCG ATGGGACTCGAAACCTGCCTCTACGACAAGGTGGAGGACGGGATCCCGTG TTTTGTGGCGCGCTATGTGGACGACACGGCGACAGGTGTGCAGCCCTCCC AGCACCACATCTATGCTGGCCTCATCGAGGCGCTGGAGGCTGAGGGTCTG GAGCTACACAAACTAGGGAATCTCATCGGCCAGAAATTGCTGGGCATTCA AGTGCGAGCTAAGCCAGGGACCAACCACCTGATTCTGGATCAACGGGACT ATATTCTGGCGACTGTGGAGAAGTTTCCAGAGGTCAAGGCCCACAAGCCA GTGGATGTGCCGATGGACCCACGACTGGATCTCTTCGAGGAGGGCAGCCT AATGCAGGAGCCGCGCCAATACCAGTCGCTGATCGGCGCACTCACTTGGC TGACGTGCTGCACTGCGCCCACGCTTGCAACAGCGGTGAACAGGCTAGCA CAGTTTCTGGTTGCTCCAACAGAAATGCACTGGGCGGCAGCGCTTGCGGT CTTGGCCTATGCGCACCAGCACCTGGACGAGATGGAGCTGGAGATCGGCG GCGGGGGCCTGGAGCTGAGGGGCTACGCGGATGCTGACTTCGCGCCGGAC AGGGACCGCAAGTCTACCTCAGGGTATGTCTTCTTTATTGGGCACACTAC TCTGTCATGGGCCTCAAGGAAACAAAAGGGGGTTGTGCTCCACAGCACGC ATGCGGAGCTTAATGCCTTGCTGGAGGGTGGTAAAGAGGCACTTCATCTG CGGCAGTTGTGTGGGTTCTTACTGATCCTGCTGCAGCGCGACGGTTTCCC GCCTACCATCATCCACCAGGATAATCTCAGCTGTGTGGGACTTGCTGAGA AGGGGCGGCTTTCCTCGTTGACCAAGCACATTGACATCAAAGACCTGTGG ATCAAACAGGAA
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Coding sequence (CDS) from alignment at H-akashiwo_Contig117:1050504..1053515-

>mRNA_H-akashiwo_Contig117.20.1 ID=mRNA_H-akashiwo_Contig117.20.1|Name=mRNA_H-akashiwo_Contig117.20.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=2820bp|location=Sequence derived from alignment at H-akashiwo_Contig117:1050504..1053515- (Heterosigma akashiwo CCMP452)
GTGGCATCCACACCGGTGCGAGATATTTTGAAACACTTGCATCGAGTCTT
CGGTCATGTTGCATATGACAGGCTCAGGATGATGCAGAAGAGCGGGGCAG
TAATTGGACTTTCGGATTTGCCTGAAGTGGAGATGCCGGCCAATGGGTGT
GATACATGTATGCAGGGTAAGGCGGAGAAAGCATCTATGGCAAGCACGAG
CAGCAGTACCAGGGCGGCGCAGCCAGCTGATGAGATATGGTTTGACCTTC
ACTTTCCGAAGGTGAAGAAGAGTAAGACCCTGGGCGGGTACTACTGCTTT
GCCAGCATCACCGATGATGCAACTGGTTATCTTAAAGTGAAGCTGTTGAA
AAGCAAAGACGGGGCCGGAGCCGCTTATAAGGAGTACAGCGCCATGGTCA
AGGCCCAGTATAGAAGGGTTGTGAGGATCTTCCACCATGGTGACAATGAC
CCGGTCACCCTTGGTGATGGTAAGTTCCAGGCTTATCTGAAACAGGAGGG
GACTCACCCAGAGCCTACGGACGTAGGAGAACCGAGGATGAATGCCAGGG
CAGAGGCTGCTGGCAAGTCGGTAATGAGGATGGCGCGCTGCATGATCTTG
GGCGCTAGGCTGCCAGACAGATACTGGCCCTTTGCAGTGCTGTACGCGGC
TCACATCTACAATTGCTCAACACACGAGGATCATGGCACTGTGACACCGT
ATGAGGGCTGGCATGGGCGGAAGCCGGACCTCGGGCATCTGCATGCCTTC
GGGTGCTTCTGTGTGGTGACAAAGCTGGAGCGGAAGCAGAAGGCCAGCAG
TAAAATGGCGCCGCGCGGGGACCCTGGCATTTTTCTGGGGATTGACGAGA
GTTTCCCGCCTAAGTATGTGGTTCTGAACGGGACCACGGGCAAGGAAATC
AGATCCCGGTCAGTGGTCTTCAACGAGAACATCTTCACTGGCCTGGCTCG
TGGTGATCTTTGGGTGGCATACAGGGACTTGGTGGATGGCATTGAGGCTG
TGACTGATACACCGGGTCGCATGCCGAGGCCTCAGCGGAGGAGCCAGCAG
AAGAAGCACGTCAGCTTTGCGGGGCCGGAAGCTGGGGAGCCAGAGCTGAG
GGCTCCACAGAGACCGCTTCAGCAGGAGGAGGCCGGCTCCATGGTTCCGA
ATGATCCGGAGGAGGAGGAGGCGGAGCCGGGTGACCAGAAGGGAGCATTG
GCTTTCGATCCCGACCTAATTGCAGCAGCGGAGGGCAAGCCGCGGTCTGA
GGAGAGAAGGTCTGCAAGGTTACGCGGGAAGCCGCGACCGAACTACTCGG
GCAAGACCACGCGCGGGGACCGAGCCAAGGAGGCGGCGGTGGAGCAGTTC
TGCGGGCTGATGGCGGCCGTGGAGGCGGGACCAGAGAAGATCACCCCGCA
GTCCTTCTATCAGGCTATAGATGGGCCCGACAGTGATGTGTGGGCCAAGG
CCATGATGGAACAGATGACCAAGTGGCAGAAGCGCGGCATAGGCATCCTG
GTGATGCGTGAGCCTGGTATGGAGGTAGTTCGCACCCGGTGGGTTTTTGC
CTGGAAAGGTGATGGGAGGGCTAAGGCGAGGATAGCAGCCAAAGGCTTCG
ATCAGACATTTGGGGTCTCTTACAGTGAGTCATTTAGTCCGACGCTTAAG
ATGACTAGTCTGCGTCTTTTTCTGCACCTGTGTGTAGAGTATGGCCTCGA
CATCTTCATGGATGATGTCGTGGCGGCTTTCATCAGCTCGGAGCTGGGCG
AAGACGAGGTTTACCTGGAAGTGCCAGAGGGCTTTGTCTGCCCTCCAGGA
TATGTTCTTCATCTACGGGCACCGGTGGAGGGCCTGAAGCAGGCCTCAGC
CAAATGGACGCGGAAGATCGACGGCATCATGACCACACAAGGTTTCCAAC
CGGTGGCGATGGGACTCGAAACCTGCCTCTACGACAAGGTGGAGGACGGG
ATCCCGTGTTTTGTGGCGCGCTATGTGGACGACACGGCGACAGGTGTGCA
GCCCTCCCAGCACCACATCTATGCTGGCCTCATCGAGGCGCTGGAGGCTG
AGGGTCTGGAGCTACACAAACTAGGGAATCTCATCGGCCAGAAATTGCTG
GGCATTCAAGTGCGAGCTAAGCCAGGGACCAACCACCTGATTCTGGATCA
ACGGGACTATATTCTGGCGACTGTGGAGAAGTTTCCAGAGGTCAAGGCCC
ACAAGCCAGTGGATGTGCCGATGGACCCACGACTGGATCTCTTCGAGGAG
GGCAGCCTAATGCAGGAGCCGCGCCAATACCAGTCGCTGATCGGCGCACT
CACTTGGCTGACGTGCTGCACTGCGCCCACGCTTGCAACAGCGGTGAACA
GGCTAGCACAGTTTCTGGTTGCTCCAACAGAAATGCACTGGGCGGCAGCG
CTTGCGGTCTTGGCCTATGCGCACCAGCACCTGGACGAGATGGAGCTGGA
GATCGGCGGCGGGGGCCTGGAGCTGAGGGGCTACGCGGATGCTGACTTCG
CGCCGGACAGGGACCGCAAGTCTACCTCAGGGTATGTCTTCTTTATTGGG
CACACTACTCTGTCATGGGCCTCAAGGAAACAAAAGGGGGTTGTGCTCCA
CAGCACGCATGCGGAGCTTAATGCCTTGCTGGAGGGTGGTAAAGAGGCAC
TTCATCTGCGGCAGTTGTGTGGGTTCTTACTGATCCTGCTGCAGCGCGAC
GGTTTCCCGCCTACCATCATCCACCAGGATAATCTCAGCTGTGTGGGACT
TGCTGAGAAGGGGCGGCTTTCCTCGTTGACCAAGCACATTGACATCAAAG
ACCTGTGGATCAAACAGGAA
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