mRNA_H-akashiwo_Contig116.2.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig116.2.1
Unique NamemRNA_H-akashiwo_Contig116.2.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
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BLAST of mRNA_H-akashiwo_Contig116.2.1 vs. uniprot
Match: W7TE55_9STRA (Calcium-dependent protein kinase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TE55_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 4.370e-9
Identity = 29/64 (45.31%), Postives = 45/64 (70.31%), Query Frame = 3 
Query:  183 LDEDYDVQGLLGRGAFSEVYLGVHRETGEKVALKIFSEDKYMYNPRVQVAIRREVAIMTELRGL 374
            +++ YD+  +LG+G+FS VYLGVH+ +GE+VALK+     Y  N R +  +R EVA+M+ +R L
Sbjct:   30 VEQVYDLGRVLGKGSFSTVYLGVHKASGEEVALKVIPAKNYRRNERAKQLLRTEVAVMSRIRKL 93
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BLAST of mRNA_H-akashiwo_Contig116.2.1 vs. uniprot
Match: A0A1X2GZT4_SYNRA (Protein kinase domain-containing protein n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2GZT4_SYNRA)

HSP 1 Score: 63.5 bits (153), Expect = 6.180e-9
Identity = 32/55 (58.18%), Postives = 39/55 (70.91%), Query Frame = 3 
Query:  192 DYDVQGLLGRGAFSEVYLGVHRETGEKVALKIFSEDKYMYNPRVQVAIRREVAIM 356
            DY V   LG+GA   V LGVHR TGE+VA+KI S+   M NP ++ A+RREVAIM
Sbjct:   42 DYYVGKTLGKGASGRVKLGVHRVTGEQVAIKIISKSHLMANPTIEKAVRREVAIM 96
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BLAST of mRNA_H-akashiwo_Contig116.2.1 vs. uniprot
Match: A0A167NPA2_PHYB8 (Protein kinase domain-containing protein n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A167NPA2_PHYB8)

HSP 1 Score: 63.2 bits (152), Expect = 6.930e-9
Identity = 32/65 (49.23%), Postives = 43/65 (66.15%), Query Frame = 3 
Query:  174 ARSLDEDYDVQGLLGRGAFSEVYLGVHRETGEKVALKIFSEDKYMYNPRVQVAIRREVAIMTELR 368
            AR    DY V   LG+GA   V LG+HR+TGE+VA+KI S+     NP ++ A+RRE+AIM  +R
Sbjct:   52 ARKTIGDYYVGKTLGKGASGRVKLGIHRQTGEQVAIKIISKAHLAANPAIEKAVRREIAIMKLIR 116
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BLAST of mRNA_H-akashiwo_Contig116.2.1 vs. uniprot
Match: A0A077WS75_9FUNG (Protein kinase domain-containing protein n=1 Tax=Lichtheimia ramosa TaxID=688394 RepID=A0A077WS75_9FUNG)

HSP 1 Score: 60.8 bits (146), Expect = 8.100e-9
Identity = 31/67 (46.27%), Postives = 42/67 (62.69%), Query Frame = 3 
Query:  168 SGARSLDEDYDVQGLLGRGAFSEVYLGVHRETGEKVALKIFSEDKYMYNPRVQVAIRREVAIMTELR 368
            S  R    DY +  +LG+GA   V LG+HR TGE VA+KI S+     NP ++ A+RRE+AIM  +R
Sbjct:   29 SSPRKCIGDYYIGKVLGKGASGRVKLGIHRHTGEHVAIKIISKAFLASNPTIEKAVRREIAIMKLIR 95
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BLAST of mRNA_H-akashiwo_Contig116.2.1 vs. uniprot
Match: A0A8H7VFG0_9FUNG (Protein kinase domain-containing protein n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7VFG0_9FUNG)

HSP 1 Score: 61.6 bits (148), Expect = 2.910e-8
Identity = 31/60 (51.67%), Postives = 40/60 (66.67%), Query Frame = 3 
Query:  177 RSLDEDYDVQGLLGRGAFSEVYLGVHRETGEKVALKIFSEDKYMYNPRVQVAIRREVAIM 356
            R L  DY +   LG+GA   V LGVHR TGE+VA+KI S+     NP ++ A+RRE+AIM
Sbjct:   85 RKLIGDYYLGKTLGKGASGRVKLGVHRHTGEQVAIKIISKTHLAANPAIEKAVRREIAIM 144
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BLAST of mRNA_H-akashiwo_Contig116.2.1 vs. uniprot
Match: A0A1X2I719_9FUNG (Protein kinase domain-containing protein n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2I719_9FUNG)

HSP 1 Score: 61.2 bits (147), Expect = 4.010e-8
Identity = 30/59 (50.85%), Postives = 40/59 (67.80%), Query Frame = 3 
Query:  192 DYDVQGLLGRGAFSEVYLGVHRETGEKVALKIFSEDKYMYNPRVQVAIRREVAIMTELR 368
            DY V   LG+GA   V LG+HR TGE+VA+KI S+     NP ++ A+RRE+AIM  +R
Sbjct:  118 DYYVGKTLGKGASGRVKLGIHRHTGEQVAIKIISKAHLAANPAIEKAVRREIAIMKLIR 176
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BLAST of mRNA_H-akashiwo_Contig116.2.1 vs. uniprot
Match: A0A8H7SRM9_9FUNG (Protein kinase domain-containing protein n=1 Tax=Thamnidium elegans TaxID=101142 RepID=A0A8H7SRM9_9FUNG)

HSP 1 Score: 60.8 bits (146), Expect = 5.400e-8
Identity = 30/55 (54.55%), Postives = 38/55 (69.09%), Query Frame = 3 
Query:  192 DYDVQGLLGRGAFSEVYLGVHRETGEKVALKIFSEDKYMYNPRVQVAIRREVAIM 356
            DY V   LG+GA   V LGVHR TGE+VA+KI S+     NP ++ A+RRE+AIM
Sbjct:   75 DYVVGKTLGKGASGRVKLGVHRHTGEQVAIKIISKAHLAANPAIEKAVRREIAIM 129
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BLAST of mRNA_H-akashiwo_Contig116.2.1 vs. uniprot
Match: A0A8H7RHP6_9FUNG (Protein kinase domain-containing protein n=1 Tax=Mucor saturninus TaxID=64648 RepID=A0A8H7RHP6_9FUNG)

HSP 1 Score: 60.8 bits (146), Expect = 5.420e-8
Identity = 30/55 (54.55%), Postives = 38/55 (69.09%), Query Frame = 3 
Query:  192 DYDVQGLLGRGAFSEVYLGVHRETGEKVALKIFSEDKYMYNPRVQVAIRREVAIM 356
            DY V   LG+GA   V LGVHR TGE+VA+KI S+     NP ++ A+RRE+AIM
Sbjct:   75 DYVVGKTLGKGASGRVKLGVHRHTGEQVAIKIISKAHLAANPAIEKAVRREIAIM 129
[Close]
BLAST of mRNA_H-akashiwo_Contig116.2.1 vs. uniprot
Match: A0A0B7N0C8_9FUNG (Protein kinase domain-containing protein n=6 Tax=Mucoraceae TaxID=34489 RepID=A0A0B7N0C8_9FUNG)

HSP 1 Score: 60.8 bits (146), Expect = 5.430e-8
Identity = 30/55 (54.55%), Postives = 38/55 (69.09%), Query Frame = 3 
Query:  192 DYDVQGLLGRGAFSEVYLGVHRETGEKVALKIFSEDKYMYNPRVQVAIRREVAIM 356
            DY V   LG+GA   V LGVHR TGE+VA+KI S+     NP ++ A+RRE+AIM
Sbjct:   74 DYVVGKTLGKGASGRVKLGVHRHTGEQVAIKIISKAHLAANPAIEKAVRREIAIM 128
[Close]
BLAST of mRNA_H-akashiwo_Contig116.2.1 vs. uniprot
Match: A0A1C7NGY3_9FUNG (Serine/threonine-protein kinase GIN4 n=1 Tax=Choanephora cucurbitarum TaxID=101091 RepID=A0A1C7NGY3_9FUNG)

HSP 1 Score: 60.1 bits (144), Expect = 9.690e-8
Identity = 29/55 (52.73%), Postives = 38/55 (69.09%), Query Frame = 3 
Query:  192 DYDVQGLLGRGAFSEVYLGVHRETGEKVALKIFSEDKYMYNPRVQVAIRREVAIM 356
            DY V   LG+GA   V LGVH+ TGE+VA+KI S+     NP ++ A+RRE+AIM
Sbjct:   52 DYIVGKTLGKGASGRVKLGVHKHTGEQVAIKIISKTHLAANPAIEKAVRREIAIM 106
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig116.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
W7TE55_9STRA4.370e-945.31Calcium-dependent protein kinase n=2 Tax=Monodopsi... [more]
A0A1X2GZT4_SYNRA6.180e-958.18Protein kinase domain-containing protein n=1 Tax=S... [more]
A0A167NPA2_PHYB86.930e-949.23Protein kinase domain-containing protein n=1 Tax=P... [more]
A0A077WS75_9FUNG8.100e-946.27Protein kinase domain-containing protein n=1 Tax=L... [more]
A0A8H7VFG0_9FUNG2.910e-851.67Protein kinase domain-containing protein n=1 Tax=M... [more]
A0A1X2I719_9FUNG4.010e-850.85Protein kinase domain-containing protein n=1 Tax=A... [more]
A0A8H7SRM9_9FUNG5.400e-854.55Protein kinase domain-containing protein n=1 Tax=T... [more]
A0A8H7RHP6_9FUNG5.420e-854.55Protein kinase domain-containing protein n=1 Tax=M... [more]
A0A0B7N0C8_9FUNG5.430e-854.55Protein kinase domain-containing protein n=6 Tax=M... [more]
A0A1C7NGY3_9FUNG9.690e-852.73Serine/threonine-protein kinase GIN4 n=1 Tax=Choan... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig116contigH-akashiwo_Contig116:31040..31602 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog36080.S2JVE3
Preferred nameGIN4
PFAMsFungal_KA1,Pkinase
Model size439
Max annot lvl4751|Fungi
KEGG koko:K02515,ko:K06668,ko:K18679,ko:K18680
KEGG Pathwayko04011,ko04111,map04011,map04111
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000075,GO:0000086,GO:0000131,GO:0000144,GO:0000165,GO:0000166,GO:0000187,GO:0000278,GO:0000280,GO:0000399,GO:0000921,GO:0001403,GO:0001558,GO:0001817,GO:0001932,GO:0001934,GO:0002218,GO:0002221,GO:0002224,GO:0002237,GO:0002253,GO:0002376,GO:0002682,GO:0002684,GO:0002757,GO:0002758,GO:0002764,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004683,GO:0004712,GO:0005488,GO:0005515,GO:0005516,GO:0005524,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0005933,GO:0005935,GO:0005938,GO:0005940,GO:0006082,GO:0006464,GO:0006468,GO:0006690,GO:0006691,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006897,GO:0006907,GO:0006950,GO:0006952,GO:0006954,GO:0006974,GO:0006996,GO:0007010,GO:0007049,GO:0007093,GO:0007114,GO:0007117,GO:0007124,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007346,GO:0008104,GO:0008144,GO:0008150,GO:0008152,GO:0008289,GO:0008361,GO:0009056,GO:0009057,GO:0009267,GO:0009405,GO:0009605,GO:0009607,GO:0009617,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009931,GO:0009966,GO:0009967,GO:0009987,GO:0009991,GO:0010033,GO:0010389,GO:0010458,GO:0010468,GO:0010562,GO:0010564,GO:0010570,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010646,GO:0010647,GO:0010857,GO:0010948,GO:0010971,GO:0010972,GO:0015630,GO:0016043,GO:0016049,GO:0016192,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0018105,GO:0018193,GO:0018209,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019752,GO:0019899,GO:0019900,GO:0019901,GO:0019954,GO:0022402,GO:0022414,GO:0022607,GO:0023014,GO:0023051,GO:0023052,GO:0023056,GO:0030163,GO:0030308,GO:0030427,GO:0030447,GO:0030554,GO:0031097,GO:0031106,GO:0031323,GO:0031324,GO:0031325,GO:0031329,GO:0031330,GO:0031347,GO:0031349,GO:0031399,GO:0031401,GO:0031567,GO:0031569,GO:0031667,GO:0031668,GO:0031669,GO:0031974,GO:0031981,GO:0032147,GO:0032153,GO:0032155,GO:0032156,GO:0032161,GO:0032185,GO:0032268,GO:0032270,GO:0032465,GO:0032496,GO:0032505,GO:0032535,GO:0032553,GO:0032555,GO:0032559,GO:0032675,GO:0032680,GO:0032879,GO:0032880,GO:0033036,GO:0033365,GO:0033554,GO:0033674,GO:0033993,GO:0034097,GO:0034613,GO:0034622,GO:0035556,GO:0035639,GO:0035690,GO:0035924,GO:0036094,GO:0036211,GO:0036267,GO:0040007,GO:0040008,GO:0042149,GO:0042221,GO:0042325,GO:0042327,GO:0042493,GO:0042594,GO:0043085,GO:0043167,GO:0043168,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043405,GO:0043406,GO:0043408,GO:0043410,GO:0043412,GO:0043436,GO:0043487,GO:0043488,GO:0043489,GO:0043549,GO:0043933,GO:0044085,GO:0044093,GO:0044110,GO:0044116,GO:0044117,GO:0044182,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044281,GO:0044351,GO:0044380,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044448,GO:0044464,GO:0044770,GO:0044772,GO:0044839,GO:0044879,GO:0045088,GO:0045089,GO:0045786,GO:0045787,GO:0045859,GO:0045860,GO:0045926,GO:0045930,GO:0045931,GO:0045934,GO:0045937,GO:0046777,GO:0048010,GO:0048255,GO:0048285,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0050776,GO:0050778,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051019,GO:0051128,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051239,GO:0051246,GO:0051247,GO:0051252,GO:0051253,GO:0051301,GO:0051302,GO:0051338,GO:0051347,GO:0051641,GO:0051704,GO:0051707,GO:0051716,GO:0051726,GO:0060255,GO:0060258,GO:0060341,GO:0061013,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070727,GO:0070783,GO:0070784,GO:0070785,GO:0070848,GO:0070887,GO:0070925,GO:0070935,GO:0071310,GO:0071341,GO:0071363,GO:0071496,GO:0071704,GO:0071840,GO:0071900,GO:0071902,GO:0071944,GO:0072395,GO:0072413,GO:0072453,GO:0072471,GO:0072697,GO:0080090,GO:0080134,GO:0080135,GO:0090066,GO:0090068,GO:0097159,GO:0097367,GO:0098657,GO:0099568,GO:0099738,GO:0106011,GO:0106012,GO:0120046,GO:0120047,GO:0140014,GO:0140096,GO:1900034,GO:1900428,GO:1900429,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901568,GO:1901575,GO:1901700,GO:1901900,GO:1901987,GO:1901988,GO:1901989,GO:1901990,GO:1901991,GO:1901992,GO:1902369,GO:1902373,GO:1902412,GO:1902531,GO:1902533,GO:1902749,GO:1902750,GO:1902751,GO:1902935,GO:1903047,GO:1903311,GO:1903312,GO:1903555,GO:1903827,GO:1903829,GO:1904375,GO:1904377,GO:1904776,GO:1904778,GO:1990778,GO:2000220,GO:2000221
Exons2
Evalue3.61e-09
EggNOG OGsKOG0588@1|root,KOG0588@2759|Eukaryota,38BGN@33154|Opisthokonta,3NW2V@4751|Fungi,1GS2G@112252|Fungi incertae sedis
EC2.7.11.1
DescriptionMortierella verticillata NRRL 6337 CAMK CAMKL BRSK protein kinase
Cds size351
COG categoryT
BRITEko00000,ko00001,ko01000,ko01001,ko04812
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387101.9123192-UTR-H-akashiwo_Contig116:31039..311251681387101.9123192-UTR-H-akashiwo_Contig116:31039..31125Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig116 31040..31125 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387101.9235587-CDS-H-akashiwo_Contig116:31125..313831681387101.9235587-CDS-H-akashiwo_Contig116:31125..31383Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig116 31126..31383 +
1681387101.932402-CDS-H-akashiwo_Contig116:31509..316021681387101.932402-CDS-H-akashiwo_Contig116:31509..31602Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig116 31510..31602 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig116.2.1prot_H-akashiwo_Contig116.2.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig116 31126..31602 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig116.2.1

>prot_H-akashiwo_Contig116.2.1 ID=prot_H-akashiwo_Contig116.2.1|Name=mRNA_H-akashiwo_Contig116.2.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=117bp
MHNQITLEEVEAMITREEQGLPPEPSESGARSLDEDYDVQGLLGRGAFSE
VYLGVHRETGEKVALKIFSEDKYMYNPRVQVAIRREVAIMTELRGLARGT
RAWSAGGRGVHGRPEGP
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mRNA from alignment at H-akashiwo_Contig116:31040..31602+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig116.2.1 ID=mRNA_H-akashiwo_Contig116.2.1|Name=mRNA_H-akashiwo_Contig116.2.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=563bp|location=Sequence derived from alignment at H-akashiwo_Contig116:31040..31602+ (Heterosigma akashiwo CCMP452)
GTTGAATGTGCGGCTGCTGATCGGCCTTAAAAAGATTGTCTTCAGCAACT
TCATTCAGCTATATACTTTATAGTTCACTCAGCGAAATGCATAACCAAAT
CACTCTCGAGGAGGTCGAAGCGATGATTACGCGGGAGGAGCAGGGTTTGC
CCCCAGAACCCTCTGAATCAGGCGCTCGATCCCTCGATGAAGACTATGAT
GTTCAGGGGCTACTCGGTAGGGGAGCGTTCTCTGAGGTGTACCTAGGGGT
GCATCGCGAGACGGGCGAAAAGGTTGCACTCAAGATATTTTCCGAGGACA
AGTACATGTACAACCCTCGGGTGCAAGTAGCCATACGAAGAGAGGTGTGA
CCAAGCAGCTGAAGCCCCGTGCCCCCCACTTCTCATCCACTTCCGACCTC
AAGCTCGCCCACTGGCGAGCAAAGCCCCGCCGACCCCCCGCCCAGCCCAC
CCCACCCCCCTTCGCCCCAGGTGGCGATCATGACCGAGCTGCGGGGGCTG
GCGCGGGGCACCCGTGCGTGGTCGGCTGGTGGGCGCGGGGTCCACGGGCG
ACCTGAGGGCCCC
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Coding sequence (CDS) from alignment at H-akashiwo_Contig116:31040..31602+

>mRNA_H-akashiwo_Contig116.2.1 ID=mRNA_H-akashiwo_Contig116.2.1|Name=mRNA_H-akashiwo_Contig116.2.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=351bp|location=Sequence derived from alignment at H-akashiwo_Contig116:31040..31602+ (Heterosigma akashiwo CCMP452)
ATGCATAACCAAATCACTCTCGAGGAGGTCGAAGCGATGATTACGCGGGA
GGAGCAGGGTTTGCCCCCAGAACCCTCTGAATCAGGCGCTCGATCCCTCG
ATGAAGACTATGATGTTCAGGGGCTACTCGGTAGGGGAGCGTTCTCTGAG
GTGTACCTAGGGGTGCATCGCGAGACGGGCGAAAAGGTTGCACTCAAGAT
ATTTTCCGAGGACAAGTACATGTACAACCCTCGGGTGCAAGTAGCCATAC
GAAGAGAGGTGGCGATCATGACCGAGCTGCGGGGGCTGGCGCGGGGCACC
CGTGCGTGGTCGGCTGGTGGGCGCGGGGTCCACGGGCGACCTGAGGGCCC
C
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