mRNA_H-akashiwo_Contig1155.12.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1155.12.1 vs. uniprot
Match: A0A7S3XW83_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XW83_HETAK) HSP 1 Score: 117 bits (294), Expect = 1.230e-30 Identity = 56/57 (98.25%), Postives = 57/57 (100.00%), Query Frame = 1
Query: 1 AVDPRRGAMCVGAVPPVLNYNIRFRCTDRKAVGAIARALREKDGGLPGVEAVALRHA 171
AVDPRRGAMCVGAVPPVLNYN+RFRCTDRKAVGAIARALREKDGGLPGVEAVALRHA
Sbjct: 211 AVDPRRGAMCVGAVPPVLNYNVRFRCTDRKAVGAIARALREKDGGLPGVEAVALRHA 267
BLAST of mRNA_H-akashiwo_Contig1155.12.1 vs. uniprot
Match: A0A7S2UY57_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UY57_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 3.970e-14 Identity = 29/54 (53.70%), Postives = 42/54 (77.78%), Query Frame = 1
Query: 7 DPRRGAMCVGAVPPVLNYNIRFRCTDRKAVGAIARALREKDGGLPGVEAVALRH 168
DP +GA+C+GAV PVLN+N+R + T++K ++ RA+RE+DGGL VEA+ L H
Sbjct: 2 DPSKGAICIGAVAPVLNFNVRLKTTNKKLAASVTRAVRERDGGLEKVEAMTLLH 55
BLAST of mRNA_H-akashiwo_Contig1155.12.1 vs. uniprot
Match: A0A2P6TQF4_CHLSO (Formimidoyltransferase-cyclodeaminase-like n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TQF4_CHLSO) HSP 1 Score: 65.9 bits (159), Expect = 3.000e-11 Identity = 31/56 (55.36%), Postives = 39/56 (69.64%), Query Frame = 1
Query: 1 AVDPRRGAMCVGAVPPVLNYNIRFRCTDRKAVGAIARALREKDGGLPGVEAVALRH 168
A PR G CVGAVP ++NYN+ D A AIARA+ ++ GGLPGV+A+ALRH
Sbjct: 211 AAPPRSGVCCVGAVPWLVNYNVLLHSDDLAAARAIARAVSQRGGGLPGVQAMALRH 266
BLAST of mRNA_H-akashiwo_Contig1155.12.1 vs. uniprot
Match: A0A4D9D4Y2_9STRA (FTCD_N domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D4Y2_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 3.400e-10 Identity = 27/55 (49.09%), Postives = 39/55 (70.91%), Query Frame = 1
Query: 4 VDPRRGAMCVGAVPPVLNYNIRFRCTDRKAVGAIARALREKDGGLPGVEAVALRH 168
VDPR G +C GAVP V N+NIR + ++++ + +A+R +DGG GVEA+ LRH
Sbjct: 176 VDPRLGLLCCGAVPYVQNFNIRLKTSEKQIAAMVTKAVRSRDGGPVGVEALTLRH 230
BLAST of mRNA_H-akashiwo_Contig1155.12.1 vs. uniprot
Match: D8TIL8_VOLCA (FTCD_N domain-containing protein (Fragment) n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TIL8_VOLCA) HSP 1 Score: 57.4 bits (137), Expect = 3.060e-8 Identity = 27/54 (50.00%), Postives = 38/54 (70.37%), Query Frame = 1
Query: 10 PRRGAMCVGAVPPVLNYNIRFRCTDRKAVGAIARALREKDGGLPGVEAVALRHA 171
P+ G + +GAVP V+NYN+ + D +ARA+ E+ GGLPGVEA+AL+HA
Sbjct: 166 PQSGLVTIGAVPWVVNYNVPLQDVDLAEAKWLARAVSERGGGLPGVEAMALKHA 219
BLAST of mRNA_H-akashiwo_Contig1155.12.1 vs. uniprot
Match: A0A8J4LTY8_9CHLO (FTCD_N domain-containing protein n=2 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4LTY8_9CHLO) HSP 1 Score: 56.2 bits (134), Expect = 9.180e-8 Identity = 26/53 (49.06%), Postives = 37/53 (69.81%), Query Frame = 1
Query: 10 PRRGAMCVGAVPPVLNYNIRFRCTDRKAVGAIARALREKDGGLPGVEAVALRH 168
P+ G + +GAVP V NYN+ + D + +ARA+ E+ GGLPGVEA+AL+H
Sbjct: 344 PQSGLLTIGAVPWVTNYNVPLQDVDLEEAKWLARAVSERGGGLPGVEAMALKH 396
BLAST of mRNA_H-akashiwo_Contig1155.12.1 vs. uniprot
Match: A0A8J4BSK5_9CHLO (FTCD_N domain-containing protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4BSK5_9CHLO) HSP 1 Score: 56.2 bits (134), Expect = 9.190e-8 Identity = 26/53 (49.06%), Postives = 37/53 (69.81%), Query Frame = 1
Query: 10 PRRGAMCVGAVPPVLNYNIRFRCTDRKAVGAIARALREKDGGLPGVEAVALRH 168
P+ G + +GAVP V NYN+ + D + +ARA+ E+ GGLPGVEA+AL+H
Sbjct: 369 PQSGLLTIGAVPWVTNYNVPLQDVDLEEAKWLARAVSERGGGLPGVEAMALKH 421
BLAST of mRNA_H-akashiwo_Contig1155.12.1 vs. uniprot
Match: A0A7W0YSN4_9ACTN (Glutamate formiminotransferase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7W0YSN4_9ACTN) HSP 1 Score: 55.1 bits (131), Expect = 1.090e-7 Identity = 25/53 (47.17%), Postives = 35/53 (66.04%), Query Frame = 1
Query: 4 VDPRRGAMCVGAVPPVLNYNIRFRCTDRKAVGAIARALREKDGGLPGVEAVAL 162
+DPR GA+ VGA PP++ YN+ D AIA ++RE GG+PGV+A+ L
Sbjct: 61 IDPRSGAILVGARPPLVAYNVVLGGADAGVARAIAASIRESGGGMPGVQAIGL 113
BLAST of mRNA_H-akashiwo_Contig1155.12.1 vs. uniprot
Match: A0A538IF55_9ACTN (Glutamate formiminotransferase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538IF55_9ACTN) HSP 1 Score: 55.8 bits (133), Expect = 1.220e-7 Identity = 25/54 (46.30%), Postives = 36/54 (66.67%), Query Frame = 1
Query: 4 VDPRRGAMCVGAVPPVLNYNIRFRCTDRKAVGAIARALREKDGGLPGVEAVALR 165
+D R G + VGA PP++ +N+ D +A +ARA+RE+DGG PGV A+ LR
Sbjct: 222 LDERAGGVIVGARPPLIAFNVNLAGDDLEAAQEVARAVRERDGGFPGVRALGLR 275
BLAST of mRNA_H-akashiwo_Contig1155.12.1 vs. uniprot
Match: A0A7W1BUT4_9ACTN (Glutamate formimidoyltransferase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7W1BUT4_9ACTN) HSP 1 Score: 55.1 bits (131), Expect = 2.100e-7 Identity = 25/53 (47.17%), Postives = 35/53 (66.04%), Query Frame = 1
Query: 4 VDPRRGAMCVGAVPPVLNYNIRFRCTDRKAVGAIARALREKDGGLPGVEAVAL 162
+DPR GA+ VGA PP++ YN+ D AIA ++RE GG+PGV+A+ L
Sbjct: 159 LDPRSGAILVGARPPLVAYNVVLGADDAGVARAIAASIRESGGGMPGVQAIGL 211 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1155.12.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1155.12.1 >prot_H-akashiwo_Contig1155.12.1 ID=prot_H-akashiwo_Contig1155.12.1|Name=mRNA_H-akashiwo_Contig1155.12.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=49bp MCVGAVPPVLNYNIRFRCTDRKAVGAIARALREKDGGLPGVEAVALRHAback to top mRNA from alignment at H-akashiwo_Contig1155:262581..269139- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1155.12.1 ID=mRNA_H-akashiwo_Contig1155.12.1|Name=mRNA_H-akashiwo_Contig1155.12.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=6559bp|location=Sequence derived from alignment at H-akashiwo_Contig1155:262581..269139- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1155:262581..269139- >mRNA_H-akashiwo_Contig1155.12.1 ID=mRNA_H-akashiwo_Contig1155.12.1|Name=mRNA_H-akashiwo_Contig1155.12.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=147bp|location=Sequence derived from alignment at H-akashiwo_Contig1155:262581..269139- (Heterosigma akashiwo CCMP452)back to top |