mRNA_H-akashiwo_Contig1155.9.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1155.9.1 vs. uniprot
Match: A0A7S3Y431_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y431_HETAK) HSP 1 Score: 308 bits (788), Expect = 4.620e-102 Identity = 167/196 (85.20%), Postives = 169/196 (86.22%), Query Frame = 1
Query: 1 DVNTYQSLVGAFQFIREFRPDISFAVGKLSKFL-----DRLQGY----GVWRR-----------RDYTVRVVSDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSMLWELLRVRGLVRAYTDCMAVVHMANHHQKHLQRTQHLNIKRHFLKDEVSEDRLSVEHIPGKF 528
DVNTYQSLVGAFQFIREFRPDISFAVGKLSKFL D + G RR RDYTVRVVSDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSMLWELLRVRGLVRAYTDCMAVVHMANH QKHLQRT+HLNIKRHFLKDEVSEDRLSVEHIPGKF
Sbjct: 186 DVNTYQSLVGAFQFIREFRPDISFAVGKLSKFLVSPNLDHMDAALYLAGYLRRTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSMLWELLRVRGLVRAYTDCMAVVHMANH-QKHLQRTRHLNIKRHFLKDEVSEDRLSVEHIPGKF 380
BLAST of mRNA_H-akashiwo_Contig1155.9.1 vs. uniprot
Match: A0A7S4DC66_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DC66_HETAK) HSP 1 Score: 308 bits (788), Expect = 1.460e-99 Identity = 167/196 (85.20%), Postives = 169/196 (86.22%), Query Frame = 1
Query: 1 DVNTYQSLVGAFQFIREFRPDISFAVGKLSKFL-----DRLQGY----GVWRR-----------RDYTVRVVSDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSMLWELLRVRGLVRAYTDCMAVVHMANHHQKHLQRTQHLNIKRHFLKDEVSEDRLSVEHIPGKF 528
DVNTYQSLVGAFQFIREFRPDISFAVGKLSKFL D + G RR RDYTVRVVSDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSMLWELLRVRGLVRAYTDCMAVVHMANH QKHLQRT+HLNIKRHFLKDEVSEDRLSVEHIPGKF
Sbjct: 383 DVNTYQSLVGAFQFIREFRPDISFAVGKLSKFLVSPNLDHMDAALYLAGYLRRTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSMLWELLRVRGLVRAYTDCMAVVHMANH-QKHLQRTRHLNIKRHFLKDEVSEDRLSVEHIPGKF 577
BLAST of mRNA_H-akashiwo_Contig1155.9.1 vs. uniprot
Match: A0A7S3Y454_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y454_HETAK) HSP 1 Score: 308 bits (788), Expect = 1.060e-97 Identity = 167/196 (85.20%), Postives = 169/196 (86.22%), Query Frame = 1
Query: 1 DVNTYQSLVGAFQFIREFRPDISFAVGKLSKFL-----DRLQGY----GVWRR-----------RDYTVRVVSDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSMLWELLRVRGLVRAYTDCMAVVHMANHHQKHLQRTQHLNIKRHFLKDEVSEDRLSVEHIPGKF 528
DVNTYQSLVGAFQFIREFRPDISFAVGKLSKFL D + G RR RDYTVRVVSDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSMLWELLRVRGLVRAYTDCMAVVHMANH QKHLQRT+HLNIKRHFLKDEVSEDRLSVEHIPGKF
Sbjct: 559 DVNTYQSLVGAFQFIREFRPDISFAVGKLSKFLVSPNLDHMDAALYLAGYLRRTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSMLWELLRVRGLVRAYTDCMAVVHMANH-QKHLQRTRHLNIKRHFLKDEVSEDRLSVEHIPGKF 753
BLAST of mRNA_H-akashiwo_Contig1155.9.1 vs. uniprot
Match: A0A6V1VJZ2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1VJZ2_HETAK) HSP 1 Score: 272 bits (696), Expect = 2.870e-84 Identity = 142/210 (67.62%), Postives = 166/210 (79.05%), Query Frame = 1
Query: 1 DVNTYQSLVGAFQFIREFRPDISFAVGKLSKFL-----DRLQGY----GVWRR-----------RDYTVRVVSDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSMLWELLRVRGLVRAYTDCMAVVHMANHHQKHLQRTQHLNIKRHFLKDEVSEDRLSVEHIPGKFNFTDVFTKPLNRVL 570
D+ YQ+LVGAF F++EFRPDI+F+VGKLS+FL D + G RR RDY +R++SDSDHGNCPD+GRSTSG+ VF G SLI+HKSKLQHITTL A EAELVALVL+ICEA+WV +MLW+L+ R ++AYTDCMAVVHMANH QK LQRT+HLNIKRHFL DEVSE+RLSVEHIPGK+NFTDVFTKP NRVL
Sbjct: 515 DLQLYQALVGAFMFVKEFRPDINFSVGKLSRFLACPNADHMDAALYLAGYLRRTPGKGMVFGGSRDYRIRIISDSDHGNCPDSGRSTSGIAVFAGDSLIIHKSKLQHITTLGAPEAELVALVLSICEARWVRAMLWQLVGARDRMQAYTDCMAVVHMANH-QKGLQRTRHLNIKRHFLHDEVSEERLSVEHIPGKYNFTDVFTKPQNRVL 723
BLAST of mRNA_H-akashiwo_Contig1155.9.1 vs. uniprot
Match: A0A6V1TGB8_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TGB8_HETAK) HSP 1 Score: 228 bits (580), Expect = 1.080e-68 Identity = 125/211 (59.24%), Postives = 149/211 (70.62%), Query Frame = 1
Query: 1 DVNTYQSLVGAFQFIREFRPDISFAVGKLSKFL-----------DRLQGY-----------GVWRRRDYTVRVVSDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSMLWELLRVRGLVRAYTDCMAVVHMANHHQKHLQRTQHLNIKRHFLKDEVSEDRLSVEHIPGKFNFTDVFTKPLNRV 567
D++ YQ LVG QFIREFR D +FAVG+LS++L + L GY G Y +R+V+DSDHG CPDT RSTSG+ V++G SLI+HKSKLQH+ TLS+AEAELVAL+LA+CEAKWV ML L R R + AYTD MAVV MAN Q+HLQRT+HLNIKRHFLKDEV+E RLSV H+ GK N D+FTKPL RV
Sbjct: 338 DIDEYQKLVGGLQFIREFRADTAFAVGRLSRYLSCPNKDHQEAAEYLAGYLRRTADMGMVFGGRGGNPYEIRIVTDSDHGMCPDTARSTSGVSVYIGHSLIIHKSKLQHLVTLSSAEAELVALILAVCEAKWVRGMLTALTRRRPHMTAYTDSMAVVQMANQ-QQHLQRTRHLNIKRHFLKDEVAEGRLSVRHVRGKENTADIFTKPLARV 547
BLAST of mRNA_H-akashiwo_Contig1155.9.1 vs. uniprot
Match: UPI001C272154 (uncharacterized mitochondrial protein AtMg00810-like n=1 Tax=Salvia splendens TaxID=180675 RepID=UPI001C272154) HSP 1 Score: 114 bits (286), Expect = 5.440e-27 Identity = 70/207 (33.82%), Postives = 113/207 (54.59%), Query Frame = 1
Query: 1 DVNTYQSLVGAFQFIREFRPDISFAVGKLSKFLDR------------------LQGYGVWR--RRDYTVRVVSDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSMLWEL-LRVRGLVRAYTDCMAVVHMANHHQKHLQRTQHLNIKRHFLKDEVSEDRLSVEHIPGKFNFTDVFTKPL 558
D Y+ L+G ++ RPDI+FAV KLS FL + G+G++ + D ++ + SD+D CPDT RS SG +F+G SLI KSK QH + S+AE E +++ LA CE W+ ++L + + ++ + Y D A VH++++ H +RT+H+ I H ++D++ E + H+ D+FTKPL
Sbjct: 156 DPAVYRRLIGRLVYLCITRPDITFAVNKLSPFLSKPCSDHLFAAERVLKYLKGTVGHGLFYSGQADLSLSIFSDADWAGCPDTRRSISGFCLFLGTSLISWKSKKQHTVSRSSAEDEYMSMALACCEVVWIIALLKDFGINMQQPIPLYCDSQAAVHISSNPVFH-ERTKHIEIDCHTVRDKILEGVIKTVHVHNNNQLADIFTKPL 361
BLAST of mRNA_H-akashiwo_Contig1155.9.1 vs. uniprot
Match: A0A251ULI3_HELAN (Putative reverse transcriptase, RNA-dependent DNA polymerase n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251ULI3_HELAN) HSP 1 Score: 112 bits (279), Expect = 8.260e-27 Identity = 72/195 (36.92%), Postives = 114/195 (58.46%), Query Frame = 1
Query: 1 DVNTYQSLVGAFQFIREFRPDISFAVGKLSKFLDRLQGYGVWRRRDYTVRVV--SDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSMLWELLRVRGLVRA---YTDCMAVVHMANHHQKHLQRTQHLNIKRHFLKDEVSEDRLSVEHIPGKFNFTDVFTKPLNRVL 570
D Y+SL GA Q++ RPD+S+AV ++ YG+ R + +V SD+D G CPD+ RSTSG VF+G +LI +K Q + S+AEAE + A+ E W+ ++L+EL L RA + D ++ V+++N+ +H QRT+H+ I HF++++V + V H+P + D+FTK L+R L
Sbjct: 65 DPTLYRSLAGALQYLTFTRPDLSYAVQQVCTI-----DYGIRIVRSASSDLVAYSDADWGGCPDSRRSTSGYCVFLGDNLISWSAKRQPTVSRSSAEAEYRGVANAVAETTWIRNLLFEL--HTPLTRASVVFCDNVSAVYLSNNPVQH-QRTKHIEIDIHFVREKVRLGHIKVLHVPSSMQYADIFTKGLSREL 251
BLAST of mRNA_H-akashiwo_Contig1155.9.1 vs. uniprot
Match: UPI000B8F532D (uncharacterized mitochondrial protein AtMg00810-like n=1 Tax=Helianthus annuus TaxID=4232 RepID=UPI000B8F532D) HSP 1 Score: 114 bits (284), Expect = 1.210e-26 Identity = 77/213 (36.15%), Postives = 121/213 (56.81%), Query Frame = 1
Query: 1 DVNTYQSLVGAFQFIREFRPDISFAVGKLSKFLDR---------------LQG---YGV--WRRRDYTVRVVSDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSMLWEL---LRVRGLVRAYTDCMAVVHMANHHQKHLQRTQHLNIKRHFLKDEVSEDRLSVEHIPGKFNFTDVFTKPLNRVL 570
D Y+SL GA Q++ RPDIS+AV ++ F+ +QG YG+ R R + + V SD+D G CPD+ RSTSG VF+G +L+ SK Q + S+AEAE + A+ EA W+ ++L EL LR +V Y D ++ V+++++ +H QRT+H+ I HF++++V + V H+P + D+FTK L++ L
Sbjct: 162 DPTLYRSLAGALQYLTFTRPDISYAVQQVCLFMHDPRESHFAFMKRIIRYIQGTLDYGIRIGRSRSHDLVVYSDADWGGCPDSRRSTSGYCVFLGDNLLSWSSKRQPTVSRSSAEAEYRGVANAVAEATWLRNLLLELHTPLRRASIV--YCDNVSAVYLSDNPVQH-QRTKHVEIDIHFVREKVRIGHIRVLHVPSALQYADIFTKGLSKQL 371
BLAST of mRNA_H-akashiwo_Contig1155.9.1 vs. uniprot
Match: UPI000B8EFFFE (uncharacterized mitochondrial protein AtMg00810-like n=1 Tax=Helianthus annuus TaxID=4232 RepID=UPI000B8EFFFE) HSP 1 Score: 112 bits (279), Expect = 1.530e-26 Identity = 69/191 (36.13%), Postives = 109/191 (57.07%), Query Frame = 1
Query: 1 DVNTYQSLVGAFQFIREFRPDISFAVGKLSKFLDRLQGYGVWRRRDYTVRVVSDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSMLWELLR-VRGLVRAYTDCMAVVHMANHHQKHLQRTQHLNIKRHFLKDEVSEDRLSVEHIPGKFNFTDVFTKPLNRVL 570
D Y+SL GA Q++ RPDIS+AV + + G + D +R +D+D CPDT RSTSG V++G +L+ SK Q + + S+AEAE + + E W+ ++L EL R +R Y D ++ V+++ + +H QRT+H+ + HF++D V + + HIP ++ D+FTK L RVL
Sbjct: 98 DPTLYRSLAGALQYLTFTRPDISYAVQQGTTSF----GLSLGTFTDLFLRAYTDADWVGCPDTRRSTSGYCVYLGSNLLSWSSKYQAVVSRSSAEAEYRGVANVVAELCWLGNLLLELRRPLRKASVVYCDNISAVYLSGNPVQH-QRTKHIELDIHFVRDLVQRGDVRILHIPSRYQIADIFTKGLPRVL 283
BLAST of mRNA_H-akashiwo_Contig1155.9.1 vs. uniprot
Match: UPI000B8F57F4 (uncharacterized protein LOC110933430 n=1 Tax=Helianthus annuus TaxID=4232 RepID=UPI000B8F57F4) HSP 1 Score: 110 bits (274), Expect = 3.280e-26 Identity = 72/211 (34.12%), Postives = 116/211 (54.98%), Query Frame = 1
Query: 1 DVNTYQSLVGAFQFIREFRPDISFAVGKLSKFL-DRLQGYGVWRRR---------DYTVRVV----------SDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSMLWEL-LRVRGLVRAYTDCMAVVHMANHHQKHLQRTQHLNIKRHFLKDEVSEDRLSVEHIPGKFNFTDVFTKPLNRVL 570
D Y+SL A Q++ RPDIS+A ++ F+ + + + +R DY +R++ SD+D G CPD+ RSTSG VF+G +LI SK Q + S+AEAE L + EA W+ ++L +L + ++ Y D ++ V+++N+ +H QRT+H+ I HF++D+V + V H+P + D+FTK L R L
Sbjct: 27 DPTLYRSLARALQYLTFTRPDISYAAQQVCLFMHEPRDSHFAFMKRIIRYIQGTLDYGIRIIKSTSHSLVAYSDADWGGCPDSRRSTSGYCVFLGHNLISWSSKRQPTVSRSSAEAEYRGLANVVAEATWIRNLLLKLHIPLQHASVVYCDNVSAVYLSNNPVQH-QRTKHIEIDIHFVRDKVRVGHIRVLHVPSSLQYADIFTKGLPRQL 236 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1155.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1155.9.1 >prot_H-akashiwo_Contig1155.9.1 ID=prot_H-akashiwo_Contig1155.9.1|Name=mRNA_H-akashiwo_Contig1155.9.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=191bp DVNTYQSLVGAFQFIREFRPDISFAVGKLSKFLDRLQGYGVWRRRDYTVRback to top mRNA from alignment at H-akashiwo_Contig1155:184029..184660- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1155.9.1 ID=mRNA_H-akashiwo_Contig1155.9.1|Name=mRNA_H-akashiwo_Contig1155.9.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=632bp|location=Sequence derived from alignment at H-akashiwo_Contig1155:184029..184660- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1155:184029..184660- >mRNA_H-akashiwo_Contig1155.9.1 ID=mRNA_H-akashiwo_Contig1155.9.1|Name=mRNA_H-akashiwo_Contig1155.9.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=573bp|location=Sequence derived from alignment at H-akashiwo_Contig1155:184029..184660- (Heterosigma akashiwo CCMP452)back to top |