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Homology
BLAST of mRNA_H-akashiwo_Contig1155.3.1 vs. uniprot
Match: A0A7S3Y551_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y551_HETAK) HSP 1 Score: 244 bits (623), Expect = 3.150e-81 Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 1
Query: 1 AAAAGGGAVSRAVETVLCPEAAVAAAPYAAQLALPDRAQVGRPLSLEWKITNQGVVLDTLSLRAGAGSGTSPTAXXXXXXXXXGFLWGGPRQMEFQVAPGETYSLGLTLVPLAAGHQELPYFEVTSQWLGGAPVLKGG 414
AAAAGGGAVSRAVETVLCPEAAVAAAPYAAQLALPDRAQVGRPLSLEWKITNQGVVLDTLSLRAGAGSGTSPTAXXXXXXXXXGFLWGGPRQMEFQVAPGETYSLGLTLVPLAAGHQELPYFEVTSQWLGGAPVLKGG
Sbjct: 5 AAAAGGGAVSRAVETVLCPEAAVAAAPYAAQLALPDRAQVGRPLSLEWKITNQGVVLDTLSLRAGAGSGTSPTAXXXXXXXXXGFLWGGPRQMEFQVAPGETYSLGLTLVPLAAGHQELPYFEVTSQWLGGAPVLKGG 142
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Stop | 0 |
| Start | 0 |
| Seed ortholog | 2880.D7FX28 |
| PFAMs | Foie-gras_1,Gryzun,Gryzun-like |
| Model size | 416 |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K02575,ko:K20308 |
| KEGG TC | 2.A.1.8 |
| KEGG Pathway | ko00910,map00910 |
| KEGG Module | M00615 |
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Evalue | 0.000193 |
| EggNOG OGs | KOG4386@1|root,KOG4386@2759|Eukaryota |
| Description | regulation of protein complex stability |
| Cds size | 414 |
| COG category | S |
| BRITE | ko00000,ko00001,ko00002,ko02000,ko04131 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1681387100.1144145-CDS-H-akashiwo_Contig1155:106701..106746 | 1681387100.1144145-CDS-H-akashiwo_Contig1155:106701..106746 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig1155 106702..106746 - |
| 1681387100.1236303-CDS-H-akashiwo_Contig1155:107084..107165 | 1681387100.1236303-CDS-H-akashiwo_Contig1155:107084..107165 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig1155 107085..107165 - |
| 1681387100.1317403-CDS-H-akashiwo_Contig1155:110404..110575 | 1681387100.1317403-CDS-H-akashiwo_Contig1155:110404..110575 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig1155 110405..110575 - |
| 1681387100.1396656-CDS-H-akashiwo_Contig1155:114767..114884 | 1681387100.1396656-CDS-H-akashiwo_Contig1155:114767..114884 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig1155 114768..114884 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1155.3.1 >prot_H-akashiwo_Contig1155.3.1 ID=prot_H-akashiwo_Contig1155.3.1|Name=mRNA_H-akashiwo_Contig1155.3.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=138bp
AAAAGGGAVSRAVETVLCPEAAVAAAPYAAQLALPDRAQVGRPLSLEWKI TNQGVVLDTLSLRAGAGSGTSPTAAGGGGQGGGGFLWGGPRQMEFQVAPG ETYSLGLTLVPLAAGHQELPYFEVTSQWLGGAPVLKGG back to topmRNA from alignment at H-akashiwo_Contig1155:106701..114884- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-akashiwo_Contig1155.3.1 ID=mRNA_H-akashiwo_Contig1155.3.1|Name=mRNA_H-akashiwo_Contig1155.3.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=8184bp|location=Sequence derived from alignment at H-akashiwo_Contig1155:106701..114884- (Heterosigma akashiwo CCMP452) GCGGCGGCGGCCGGGGGGGGCGCCGTTTCCCGGGCGGTGGAGACGGTGCT
GTGTCCCGAGGCGGCGGTGGCGGCGGCGCCGTACGCGGCCCAACTCGCGC
TCCCCGACCGCGCACAGGTGTGAGGCGGGGGAAGGGGGCGGGAACAAGGC
GGGAAGGGCGTTGTTGCGGGGAAGAGGGGAAGGTCTCTTTTGCAGCGTTG
AGCCCCCACACCACCCCGCTGCCCCCCCCCTTTTTCCTTACTGCTCCACA
ACGCTGGCCTGCTGCCTTATCACGCTGTTGTTTACCAATGTACGCAACAA
AAAGGGGTGGGGGCTGTTGCTCAATGAACATGAGCAGCCTTGGCAGCCTT
CAAATGATAATCATTCTTTCTTGATAATATGCATGTATGTACTTGTACAG
TACTTGTGAACAAAAACAAGTAATCTTTTTGAAAATACAGTTTGGTATAT
ATTGTGGGTGGATTATTGAAGAATATGAACAATGGAGAGCAATGATCACA
CTGTCAGTTTAAATGATGAATTCAATCTATACATGACATGAATAGTAGCC
ATATGATGTATATTGCTCCACACTCTCCTTGATAAACGTTTGAAGTAATG
ATGATTTAGCAGGCCGCTCCAATTTGCACAATCATCAAGGAGGTGCGGCC
GTCTCTCAGGACGCTATGTACTAGGCTGAATTTGAAGCTTCTCTACAATA
CAACGGTCAACTTGGGCAATTTGTTGGCTCCCACGAGAGACCGGCCACGG
ACAGAATGCAGCAGAAGAATGTGTTCTATGAGATCTCTTGTAAGCAGTGT
GAGGTTAGTATAGTTATGTTCATCAGACCAAAAGAACGCTAATTTTAGCC
ACAAGGGTGAAGGAGCATAGTCATTCAGTAGGTGTAGCAAGGACTTCCTT
GTTTGTTGACAGAAGGGGAAAGGACGACACTGGGTTGCCTGCTCATTGCT
TGGACACTGATTCCTCACATCATTTTGACTTTAATGTGTCTGAGGTGCTG
CTGTGCAGAGAGATTACCGCTGGGGTAAGAGGTTGAAGAAGGAGGCCATG
TATGTTGCAATGGTGGAGAACACTTGCAATATCCAGAGGGGCAGAGATTT
GAACCCTATCTGGCTCCCTCTGCTGCGGCATTTTTATATATGTTTTTCTC
GGTCCGGGGATGGGGACTGCGTGGTGGCTGGTTTTTTCGTTGTTCCATGA
TCGCAAAAAAGATGTTTTTTTCTTGATGGCCGCTGCCACGTCCGTTCTTC
ATCTCTCGGTTTTCAACATGCTGTTGCTATTTTCTGATGAGTGGTGTCAG
CCGCTCTATGTTTTTTGGCTTGTTGACTTTTTGCTCTGGTGCTTTAATCA
GGCTTCAACCTAAGAGTACGGAGGTACAAAATTCCGTACGCTGGAAGCCA
AAATCGTCAATTTCTCCGTACCCTCCGTACCTGGTACCTTTGTACATCAA
TCCTGACTCCAGCCCCTCCCAACTTTCGACTGTCCCAACTTTTTCGAGAA
GAAGAAGAAAACATCAGTTGTGATTTTATATTTGTTCTTGGGTCACATAG
CCAATCAAAGAATATCTAGACAGGTACAGATTTTTTCTAAGCCAATCAAA
AAATTAACTCGATGCTCCTGCTGCTGCTGCTGCTGCTGACCCTCCTCATC
GGCAGCAGCAGCAGATTTTTTTTTATATATATATATACATTCTCATGCCT
CGTCACAGCCTGAGGAAGGTCCTCTACTCCAGCCGCGACCCTTTCTGTCA
TGTTGAGCCATCTCTGAGCTTGTCGATGTGAACCTTGTAGTGTTGGCGCT
CGTATCATCACGCCTTCCAATGCTCGCGGACTTCTCTATGATGCACCTCG
GACGACCATCCTTCGCTGACGACCTCCTTCTGTTACCACTCTGTCAGGTC
GTTGTACCCTTCCGTAAGTCGCCCACTCCTGGAGATTTCGCCTCCTCGCC
AGCCACGCCACTCCTCCAGATCGTCGCCATCGTAGCCAATCCTTGCCCTG
CTCCGACTACCGAGGTCCGATGATGACTAGGCCAATGGTCCAAGCGTTTC
GAGATATTGGCTATGGACGGGCGCTCGATTACCAAAGTTCGAATGCTAGA
TTCGAACCCGGGGCACAAGCTTCGTTGCACCGCTAGCTTCACTCTTTAAC
CACTCGACCACTCGATGATGATTTTTTTTTTTTTTTTTTTATACGTTCTC
ATGCCTCGTCACATCCTGAGGAAGGTCCTCTACTCCAGCCGCGACCCTTT
CTGTCATGTTGAGCCATCTCTGAGCTTGTCGATTTGAACCTTGTAGTGTT
GGCGCTCGTATCATCGCGCCTTCCAATGCTCGCAACTTCTCCATGATGCA
CCTCGGACGACCATCCTTCGCTGACGACCTCCTTCTGTTACCGCTCTGTC
AGATCACTGTACCTTTCCGTAAGTCGTCCACTCCAGGAGGTTTCGACTCA
ACTCCACCCACGCCACTCCTCCTGATCATCACCATCGTATCCAATCCTTG
CCCTTCTCCGACTACGAACCGATGATGACTGGGCCCATGGTCCAAGCGTT
TTGAAAATTGACTAGACGGGCGCTCGATTTCCAAAGTTCGAAGGTGAGAC
TCGAACCTGGGGCACAAGCTTCGTTGCACCGCTAGTTTAACTCTTTAACC
GCTCGACCACTCGATGACATATATATAAATATATATATGCAGCTCCAGAT
GAGAGAGAAGTAGTGTGCGGTAAAAGACCTGGAACTGCACAGGGAAACAC
TAGCTAGAGCCGCCAAAGCGTGCCAGGAAGCAGAGGCCACGGGGCCGGCA
GAGGGGGCAAGTCAGCTTGCAAGCCGAGGCGGGAGCAGAGGCGCTGGGAG
AGGGAGAGGCCCGGTAGCACCAAGGGGAAGAGATGGCAGAGGCAGGAGCC
CAGCTGGAAGGGGGTCAGCTGGGGCTGTGGGGGGGTTGGGTTGCGCCGGG
AGGCGCCCTCCTCTGATGGCCGAGATTAGGTTTGGCAGCGGGGGGAGGGA
CTTCCAATTCTTTGAAGCGGCTTGCGGGGAGTGCGGCATCATCAAGCACC
GCCTGGGTAAAAGGGCGGCGCCATCAAGCACTGGGAAGTGTAAGGGGGAG
TTGCCAAGTGCATATCAAGGGGGGCTATCACATCTGCTGCTGGCGGGGGG
GGTGCGGGGGGAGAGGCTGCTCCTTGGAGGAAGGGCGTGCCTTTTTCTTT
GCGATGATCAAGGAGTTGTGCGGCGAATCAGCATGGTCAGATGAGTGGAT
AGAGGCTCGTTGGCAGGAGTGGAAGCACCAGCTGGGGCTGAACTAAGGGG
CAGGGATGGGGAGGCTTGCTTGGGGTTCCAATCAGTGGTGGAGCAAGTTG
GGGCTGAAGGAGGGGTAGTAGATGGGAGAGTGTATCTGTTGTTGCAACAA
GAGGGCCATTGATACGTGGACAGCTTGTGGTATGAGAGTATTTGTTCTTG
TGTTCTTTTGATGATTTGAATATAGTGGTATTGTGAAATGGCAGATTGAG
GTGGAAGGGTCTGCTTATAGAAGCTAGGGGTTCTGCCCTGGCAGTGATTT
GATCGGCTAGACTTGAAACTAAAATTAACATCATCATCATCATCATCATA
TATATATATATATATATACCGCTCATCAAAGCGGTGGATCTGCGTACCAG
GGGCTCCAGGAAGAGGTGGAGGAGCTCGGGGTTCGAGGATGGCGAGGGGA
TTGCCATTCTCTTCCAGAGATAGTGGGGTGTGCTGTATTCGATGTTTTGT
ATTGATTTGGGTTTTGGGATTTCATGTGTAGGTTTTGGTATATTACCACA
GGGACATCTACATAGATGCAAGGCGTTCTTTCTCAAGCTGGCAATCGGAT
ACATTCGTCTTGCTGAGCCTCAAAGCCCAATCTTCGAAGCGCTCGTAGCA
AAAAAGGTCTGGCTCCGCTTGCACTGGGCCTCCCTTCTCACCTATTTTGA
CCTTCAATCGAAGATCAGAATTTTTTTTCAGCACTGTAAAAAATGACATT
TTTTATTCGGTACATTGAGAGCAAAATTATGCAAACCGTACGGAGCAAAT
TCGAGGTACGGAACGTACACCTCGAAATCCTTAGTTGGAAGCCAGTTTAA
TTGAGTATATTTTTTGCTCTTGCTCTATGACAAGTCCCTCTCTCATTTCT
TCGGAGATAAGATTTCTTCTAAGATAGCTTTGTGATCTTGCCTGATGATG
AAGGAGAAACTTAAAACGTCATATCCTTTAACAGACAGTGATAATTATTC
ACTTATTCGTCCGCATGATTTCATTTTTATCCCTCCCATATGCACGCGCT
CCTTTCAAGGTGGGCCGACCGCTGAGCCTGGAGTGGAAGATTACAAATCA
GGGGGTAGTACTAGACACACTGTCGCTGCGGGCGGGTGCCGGTAGCGGCA
CATCGCCAACCGCCGCTGGTGGTGGTGGCCAGGGCGGCGGCGGTTTTCTC
TGGGGCGGGCCACGGCAGATGGAGTTCCAGGTATACAATTTGGGGCTGGT
TTTTAGGTGACAATTGAATACGAATACCCCCAACTATCCCTATTAATCAT
TACCTTGGCGTGCAAACCAACAAAATAGAAAACCACCAAGGCCCTATCTC
ATTATTCCATGCTAATGTATTCAACGGCCTAAGCCTGCTTTGAACACTCT
ACCCCGGTGGACAGACAGTGGTCGCATTCCTGTGCTCCACAGTTGAGAAG
GCAAGATTATATTTCTATGCCGTCTCACCTTCATCACCCTTTTCAATTTC
CATTATATCATGAGTGTGAGGTCCCCCATCTTATACTGCACAAAAAAAAA
TTAATTCATCACTATTTTCCTGGTGGCTCTGCTGCCCACCTTTCTTTGTG
CCTGCACACCACAACTAGATTTGACACCATTTTCTTGCACCATCTGTTCT
TGGGTACCAACTAGATAGCAACAAAATCAAATTTATCGCTTCCTCCAATA
GACTTTTTTCTAGCAAATACAAAGGGTTCTGTTCAAGCTTTACTCTGTCG
ATCACGTCGTATACGTTGTATTTTACCTTTTCTGCACTTTCATTTTTATC
TTCTTATTATTTATTTTTTTGGTGCCAAGGAGAAGAGTATATATTCTTTG
TATATATAAAAAAAGGTTTGTGAAATTTTTACTTAAACGTTTGGCCTTTT
TTATGAGCTTTGTTTTAGTTTTTAGCCCCTCTGTACATCTCTTCTTTTTT
TTTTTTTTTTGAGGAAGCGATGGGAAAAGTAGAGGGGAAAGTGAAAAGGG
ACCAGCTCCCTAAAATTGGTGGGGTGTTGGTGGGATTTTCATCATTTTTA
TGGGAATCTGTGGGGATTTGGCCATTTTTTCAAAAATCCCATCCTTTTGG
GGAATTCCATAAGAAAGCGTGGGAATTTCACAAACTTTTGTTGTATATTT
TTAAAAAATATTTTGCGATGTTTTCAGGTCTTGTCAGTATTGGTCAACTA
TGAACCATGTGGGAAGATCTAGACTAGCCATTCCTGGCGTCTTCTTTTAG
CTTTATTAGTGGATGTTAGTACATATATATGAAAAGGGGCAGCGGCTCGT
GCTGCCTCCAAACAACAACAACAACAGTAGGTGTTTCTTCATGCTGCTGA
TCATGCTTGCTCCTTCTTCTTGTGTGATCGCCTCTTTATCATGCTGACTC
ATGACAGAGCATGTGCCATGCTTGTGCTTACAACCAATCAGAAGAGAGTT
GCAACTTCTTCTTCTTTGAAGATAGAAGAAGTAGAAGAAAGGCCGGTGTT
GCCAACCAAGATGGTTGTCAATGGGGATTGAACCCGGCCTTGTGACTAGG
AAGTCAGGGACTTAGCTTACTGGGCTGTGATGCTGTGTGGGTGGACGATG
CCAACAAAACAACGCTCCACCACAGCGGACAGGTGAGCACAGTAGCACAG
TAGTAGGAGAACAGAAATCCTCACCACTGGGCAAAGCTGAAGCTGTGTGA
AGAAGAACTCCACTAGAAGTCGAACTCCACCAGAAGTCGAACTCCACCAA
AGTTAGAAAAAGTTGAGGGTTGCTATATTACCATCATCAAAGATCCTTCT
TGATTAGAAACCCCACCAGAGCCAAGTACTGTAGCCTGATAATAGTAGAT
GAGGAGAGTCCCACCAAACGCCAAAGAGGGTCAAAAGCAAGGAGCCACTT
GAGAGCAAGTGGTAGATCAAGGTAGTATTTCAATGAGGCCAGGAGTAAAA
ATATATGTATACCTTTATTTAGAGGCAGGTAGTCGCCCCATCTATTTTTT
TTTTTTTTTTTTTTTTTTGAAGATCTAGACTCGCCATTCTTGGCTTCTTA
TTTTAGCTTTATTAGTGGATGTTAGTACATGTATATAAAAAGGGGTAGCG
GCTCGTGCTGCCTCCAAACAACAACAACAACAACAGTAGGTGTTTCTTCA
TGCTGCTGATCATGCTTGCTCCTTCTTCTTGTGTGATCGCCTCTTAATCA
TGCTGACTCATGACAGAGCACGTGCCATGCTTGTGCTTACAACCAATCAG
AAGAGAGCTGCAACTTCTTCTTCTTTGAAGATAGAAGAAGTAGAAGAAAG
GCCGGTGTTGCCAACCAAGATGGTCGCCAACGGGGATCAAACCCGGCCTT
GTGACTAGGAAGTCAGGGACTTAGCTTACTGGGCTGTGGTTTTTTTTTTT
GTCTACGTTGCAATGTGCTCCTCTCACTTCCTGAGCCACAACCAATGTCT
TCTTGCACGTGCCTTGGCTTCTGAGTACTTTGACAGACAGTGTTTCGCTA
GTGACAAGCGGGAGCTCCACCTGCGCGAAGTCCTACATACTCTGTTGTAC
CCTTTGGCCCAGATCCAGTCTTTCGGTTGTCTCATCCATTGGCGCTTCTT
CCGACAACCCACCACCACGATCAGTGCATCTGTCTCCACCCTGCGAGTCG
AGGAAGTTCCCATAGACATGGTCAGTCTCCCTCTGGTTTCGAAGTACTAG
GTACTTCTCACCATGCCATTCATGGTTTTCAAGTCGCGAGGAATCTCGAC
TCTACGACCAGTCTCCGAGCACTGGCTGCCTGCTCGTTTTTCAACGCTGT
CAGTTACGGATGCAACTGCAACGCCTACACGTTTCACGAGGACGATTCCG
TGAAACGCCCCTGAATGTTATCAATCATGATCAACACATCCAGAGTAGGT
CTCCGACCGAACCGGACGAGTCCGAGAATACTCTCAAGGATAATGCTGTG
TGAGTGGACGATGCCAACAAAATAACGTTTTGTTGCCGGCTGTTCTTCTT
CTTCTGCTGGTGCTGGTGCTGGTGTGGTTGGTGGTGCTTGTATTTTTTGC
TTCTTGTACATCAGCTGCTGCTATGAAAGAGGAACAATCTTTATGCCGGC
ACCATGAACAACCACCACCAGCACCAGCACCAGCACCATCAGAAGAAGAA
CAGCCGGCAACAAAATATATTTTAAAAAAATACGAAGAATATATACATAC
TCCCCTTGGCGCCAAAAACAAAAAGAAGAAGAAGATAATGAAAGTGCAGA
CATGGTAAAATATAACGTACATAGCGTGTCCGACAGAGTAAAGCTTGAAC
AGAACCCTTCGTACGGTGACTCTGTGAAGAAGGCACGACTGCATGTCGAA
ACGCTGGGAGCTGGAGAGGCATATCATTTGCTAGAGAAGATTACATAATT
GTTCCAATCCATTGTTTTTTGGAAAATTTATGCGGACGAACTATGTACAT
ATATGTATTCCAACATCAGGTGGCTCCAGGCGAGACCTATTCTCTTGGAC
TTACCCTGGTTCCTTTAGCTGCAGGGCATCAAGAGCTGCCCTATTTTGAG
GTAAGCATGTCATTCCACACGAGCAAGTTCAGAATATATGTTATTATCAG
CAGGGCAACAACCAATAAAATACTAAAGCACAAGGAAATGAATGGTGGAC
ACCATCAAGGAACCATCCACAAAATTCGTGATCCAAATACTTCAAAGTAG
CTTTGTGAGAATTAGTCAACGACCATTTTATTTTAATAATGAAGAAGTGT
GTGTATTATGATCAATCATCACCATCATGATGCGCTTTCTGGACCATGCA
GTCCACCCCTCCCTCCTTCCTCCTCCTTCCGGCGTTGGCCGGCCCTCCTT
CTTCTCCTTCCGGTGACGGTGGTGGTGGCTGGCGGCAGGTCACCTCCCAG
TGGCTGGGCGGGGCGCCCGTGCTGAAGGGCGGCG back to topCoding sequence (CDS) from alignment at H-akashiwo_Contig1155:106701..114884- >mRNA_H-akashiwo_Contig1155.3.1 ID=mRNA_H-akashiwo_Contig1155.3.1|Name=mRNA_H-akashiwo_Contig1155.3.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=414bp|location=Sequence derived from alignment at H-akashiwo_Contig1155:106701..114884- (Heterosigma akashiwo CCMP452) GCGGCGGCGGCCGGGGGGGGCGCCGTTTCCCGGGCGGTGGAGACGGTGCT GTGTCCCGAGGCGGCGGTGGCGGCGGCGCCGTACGCGGCCCAACTCGCGC TCCCCGACCGCGCACAGGTGGGCCGACCGCTGAGCCTGGAGTGGAAGATT ACAAATCAGGGGGTAGTACTAGACACACTGTCGCTGCGGGCGGGTGCCGG TAGCGGCACATCGCCAACCGCCGCTGGTGGTGGTGGCCAGGGCGGCGGCG GTTTTCTCTGGGGCGGGCCACGGCAGATGGAGTTCCAGGTGGCTCCAGGC GAGACCTATTCTCTTGGACTTACCCTGGTTCCTTTAGCTGCAGGGCATCA AGAGCTGCCCTATTTTGAGGTCACCTCCCAGTGGCTGGGCGGGGCGCCCG TGCTGAAGGGCGGC back to top
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