prot_H-akashiwo_Contig990.8.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig990.8.1
Unique Nameprot_H-akashiwo_Contig990.8.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length162
Homology
BLAST of mRNA_H-akashiwo_Contig990.8.1 vs. uniprot
Match: A0A7S3Y8N4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8N4_HETAK)

HSP 1 Score: 271 bits (694), Expect = 7.170e-84
Identity = 134/160 (83.75%), Postives = 147/160 (91.88%), Query Frame = 0
Query:    3 VLKHCARQLARPLTRLFQKVGKSGEFPRSWKVARVTPVYKKKDASLPENYRPISVLPTLATTFERVLMKQLSSFLFGHIPPNQFGFLPGTGTVDVGVILADRISLALEARKDVRLVALDFKGAFDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFV 162
            VLK CA QL  PLTRLFQK+GK+ EFP SWKVARVTPV+KK+DA+LP+NYRPISVLPTLATTFERVLM QL+SFL  HIP NQFGFLP TGT+DVGVILAD+IS ALEARKDVRLVALDF+GAFDKVWWRGLLAHLWAVGVRSKA++L +SYLSDRALFV
Sbjct:  338 VLKDCAGQLVAPLTRLFQKIGKAAEFPTSWKVARVTPVHKKEDANLPKNYRPISVLPTLATTFERVLMPQLASFLIEHIPSNQFGFLPDTGTLDVGVILADQISRALEARKDVRLVALDFQGAFDKVWWRGLLAHLWAVGVRSKAYQLFESYLSDRALFV 497          
BLAST of mRNA_H-akashiwo_Contig990.8.1 vs. uniprot
Match: A0A7S3Y8Z6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8Z6_HETAK)

HSP 1 Score: 261 bits (668), Expect = 1.370e-81
Identity = 129/153 (84.31%), Postives = 140/153 (91.50%), Query Frame = 0
Query:    3 VLKHCARQLARPLTRLFQKVGKSGEFPRSWKVARVTPVYKKKDASLPENYRPISVLPTLATTFERVLMKQLSSFLFGHIPPNQFGFLPGTGTVDVGVILADRISLALEARKDVRLVALDFKGAFDKVWWRGLLAHLWAVGVRSKAFKLMQSYL 155
            VLK CA QL  PLTRLFQK+GK+ EFP SWKVARVTPVYKK+DASLP+NYRPISVLPTLATTFERVLM QL+SFL  HIP NQFGFLP TGT+DVGVILAD+IS ALEARKDVRLVALDF+GAFDKVWWRGLLAHLWAVGVRSKA++L +SYL
Sbjct:  338 VLKDCAGQLVAPLTRLFQKIGKAAEFPTSWKVARVTPVYKKEDASLPKNYRPISVLPTLATTFERVLMPQLASFLIEHIPSNQFGFLPDTGTLDVGVILADQISRALEARKDVRLVALDFQGAFDKVWWRGLLAHLWAVGVRSKAYQLFESYL 490          
BLAST of mRNA_H-akashiwo_Contig990.8.1 vs. uniprot
Match: UPI001E1D5DCD (uncharacterized protein LOC123531125 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D5DCD)

HSP 1 Score: 122 bits (305), Expect = 4.010e-29
Identity = 67/157 (42.68%), Postives = 91/157 (57.96%), Query Frame = 0
Query:    4 LKHCARQLARPLTRLFQKVGKSGEFPRSWKVARVTPVYKKKDASLPENYRPISVLPTLATTFERVLMKQLSSFLFGH--IPPNQFGFLPGTGTVDVGVILADRISLALEARKDVRLVALDFKGAFDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDR 158
            L+  A  LA+PL   F  + +S  FP  WK+A VTP++KK D SLP NYRPIS+L  +    ER + K + + L  H  + PNQ GF+ G  T++    L + I  AL+  K+VR V  D   AFD+VW RG+L  L  +GVR    + + SYLS R
Sbjct:  507 LREGAPALAQPLATFFNTLLRSSNFPSQWKLANVTPIFKKSDPSLPSNYRPISLLSCIGKLMERCVHKHIYNHLIMHNLLTPNQSGFVKGDSTINQLSYLYNDICRALDEGKEVRAVFCDISKAFDRVWHRGVLYKLSRLGVRGSLLQWLSSYLSSR 663          
BLAST of mRNA_H-akashiwo_Contig990.8.1 vs. uniprot
Match: A0A8J9YR33_BRALA (Hypp5830 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9YR33_BRALA)

HSP 1 Score: 121 bits (303), Expect = 7.630e-29
Identity = 69/166 (41.57%), Postives = 93/166 (56.02%), Query Frame = 0
Query:    1 AWVLKHCARQLARPLTRLFQKVGKSGEFPRSWKVARVTPVYKKKDASLPENYRPISVLPTLATTFERVLMKQLSSFLFGHIPPN------QFGFLPGTGTVDVGVILADRISLALEARKDVRLVALDFKGAFDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRAL 160
            A VLKH A +L+RPL +LFQ +      P+ WKVA V PV+KK     P NYRPIS+L  ++   E ++ K L    + HI  N      QFGF  G  T D    +   +  A + R++ RL+ LD   AFD+VW RGL+A L A+GV     K  ++YL+DR L
Sbjct:  359 ARVLKHAAPELSRPLAKLFQLLLNKHHMPKQWKVAHVIPVHKKNSKHDPNNYRPISLLCIISKVMEAIINKAL----WQHIDKNSLISDKQFGFRAGHSTADALTYVTQHLHDAKDKRQESRLICLDISRAFDRVWHRGLIAKLKAIGVDGHVLKWFENYLADREL 520          
BLAST of mRNA_H-akashiwo_Contig990.8.1 vs. uniprot
Match: A0A6J1N3M6_BICAN (uncharacterized protein LOC112046957 n=1 Tax=Bicyclus anynana TaxID=110368 RepID=A0A6J1N3M6_BICAN)

HSP 1 Score: 113 bits (282), Expect = 4.980e-26
Identity = 62/158 (39.24%), Postives = 92/158 (58.23%), Query Frame = 0
Query:    3 VLKHCARQLARPLTRLFQKVGKSGEFPRSWKVARVTPVYKKKDASLPENYRPISVLPTLATTFERVLMKQLSSFL--FGHIPPNQFGFLPGTGTVDVGVILADRISLALEARKDVRLVALDFKGAFDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDR 158
            V+K     +   LTR      K+G FP S K+A+VTP+YK    S P NYRPISVLP ++  FE+V+  +L S+L    ++ P Q+GF   + T+   V L  +I   ++A+K    + +D K AFD V  + LL  L  +G+  KA+K+ +SYL+DR
Sbjct:  476 VVKSIKNSITDELTRCVNDCLKNGSFPASLKLAKVTPIYKSGTKSYPSNYRPISVLPVMSKIFEKVIYNRLESYLNSINYLYPKQYGFRSKSNTLSATVDLVTKIKNNIDAKKIALGIFIDLKKAFDTVSHKILLKKLQDIGITDKAYKIFESYLTDR 633          
BLAST of mRNA_H-akashiwo_Contig990.8.1 vs. uniprot
Match: UPI001E1DFDAE (uncharacterized protein LOC123533210 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DFDAE)

HSP 1 Score: 111 bits (277), Expect = 2.430e-25
Identity = 63/158 (39.87%), Postives = 88/158 (55.70%), Query Frame = 0
Query:    3 VLKHCARQLARPLTRLFQKVGKSGEFPRSWKVARVTPVYKKKDASLPENYRPISVLPTLATTFERVLMKQLSSFLFGH--IPPNQFGFLPGTGTVDVGVILADRISLALEARKDVRLVALDFKGAFDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDR 158
            +L   + +L+ PL  LF    +    P  WK A V+ +YKK DA+LP NYRPIS+L T+   FER++ K + + L       P Q GF+PG  TV+  V + D +  AL+   +VR+V  D   AFDKVW RGLL  L   G+        ++YLS+R
Sbjct:  468 ILFEASHELSFPLCDLFNASLQLSIVPNMWKEAHVSAIYKKGDATLPSNYRPISLLNTIEKVFERLIFKHVFNHLHDSRFFTPVQSGFIPGDSTVNQLVFIYDTLCKALDNGLEVRVVFFDISKAFDKVWHRGLLCKLKHAGITGPLLNWFENYLSNR 625          
BLAST of mRNA_H-akashiwo_Contig990.8.1 vs. uniprot
Match: A0A820GD01_9BILA (Hypothetical protein n=2 Tax=Rotaria magnacalcarata TaxID=392030 RepID=A0A820GD01_9BILA)

HSP 1 Score: 108 bits (271), Expect = 8.670e-25
Identity = 64/163 (39.26%), Postives = 92/163 (56.44%), Query Frame = 0
Query:    3 VLKHCARQLARPLTRLFQKVGKSGEFPRSWKVARVTPVYKKK-DASLPENYRPISVLPTLATTFERVLMKQLSSFLFGH--IPPNQFGFLPGTGTVDVGVILADRISLALEARKDVRLVALDFKGAFDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFV 162
            + K CA  +A PL  LF +    G +P   K+A++TP+YK   D +LP NYRPIS+LPT+   FE+V+ KQL+++L  +  + P QFGF  G  T D      ++I   L  +K    V +D   AFD V    L + L   G+R+ A K  +SYLSDR  ++
Sbjct:  240 IYKLCAHIIAPPLANLFNQSINEGSYPDVLKIAKLTPIYKASGDRTLPSNYRPISILPTVGKIFEKVIYKQLTNYLNVNNILSPTQFGFREGHSTGDAVTSFLEKIYKNLHEKKTTIAVFIDLSKAFDTVPHDILSSKLSHYGIRNSALKWFKSYLSDRGHYL 402          
BLAST of mRNA_H-akashiwo_Contig990.8.1 vs. uniprot
Match: A0A7S3Y8J9_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8J9_HETAK)

HSP 1 Score: 104 bits (259), Expect = 2.460e-24
Identity = 50/52 (96.15%), Postives = 50/52 (96.15%), Query Frame = 0
Query:  111 ARKDVRLVALDFKGAFDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFV 162
            ARKDVRLV LDFKGA DKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFV
Sbjct:    1 ARKDVRLVELDFKGACDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFV 52          
BLAST of mRNA_H-akashiwo_Contig990.8.1 vs. uniprot
Match: A0A7D9K5Y4_PARCT (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9K5Y4_PARCT)

HSP 1 Score: 105 bits (262), Expect = 1.540e-23
Identity = 60/156 (38.46%), Postives = 87/156 (55.77%), Query Frame = 0
Query:    3 VLKHCARQLARPLTRLFQKVGKSGEFPRSWKVARVTPVYKKKDASLPENYRPISVLPTLATTFERVLMKQLSSFLFGHIPPNQFGFLPGTGTVDVGVILADRISLALEARKDVRLVALDFKGAFDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDR 158
            +LK C+ ++  P+T LF K   +G FP  WK A + P++K +  S+  NYR IS+L  L+   E+ +  +L  F+   + P Q GF PG  TV   + +   +S AL+ +K V LV LDF  AFD+V    LL  L A+G+R       +SYLS R
Sbjct:   56 LLKECSEEITVPVTTLFNKSLSTGVFPNQWKDANLVPIHKAERKSIVSNYRGISLLDQLSKVLEKGVFGRLFDFVSPKLTPWQHGFFPGRSTVTQLLQVVHLLSSALDKKKQVDLVYLDFSKAFDRVPHDKLLHKLHAIGIRDPLLSWFRSYLSYR 211          
BLAST of mRNA_H-akashiwo_Contig990.8.1 vs. uniprot
Match: A0A8H9CHX6_9GAMM (Reverse transcriptase domain-containing protein n=3 Tax=Bathymodiolus brooksi thiotrophic gill symbiont TaxID=1052209 RepID=A0A8H9CHX6_9GAMM)

HSP 1 Score: 105 bits (263), Expect = 1.760e-23
Identity = 58/158 (36.71%), Postives = 89/158 (56.33%), Query Frame = 0
Query:    3 VLKHCARQLARPLTRLFQKVGKSGEFPRSWKVARVTPVYKKKDASLPENYRPISVLPTLATTFERVLMKQLSSFLFGH--IPPNQFGFLPGTGTVDVGVILADRISLALEARKDVRLVALDFKGAFDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDR 158
            +++  A  L  PL  LF     +  FP  WK+A VTPV+KK + S   NYRPIS++  L    ER + K + +FL  +  I P+Q GF PG   ++  + L +    AL+  K++R+V  D   AFD+VW +GLL  L  +G++      +++YL+DR
Sbjct:  120 LVREGASILKLPLCLLFNLSLSTCRFPTQWKLANVTPVFKKDNPSKVNNYRPISLISVLGKVMERCIYKHVYNFLLKNSIITPHQSGFTPGDSAINQLLSLTNEFGKALDEGKEIRVVFCDISKAFDRVWHKGLLNKLENIGIQGSLLLWIKNYLTDR 277          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig990.8.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3Y8N4_HETAK7.170e-8483.75Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S3Y8Z6_HETAK1.370e-8184.31Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
UPI001E1D5DCD4.010e-2942.68uncharacterized protein LOC123531125 n=1 Tax=Merce... [more]
A0A8J9YR33_BRALA7.630e-2941.57Hypp5830 protein n=1 Tax=Branchiostoma lanceolatum... [more]
A0A6J1N3M6_BICAN4.980e-2639.24uncharacterized protein LOC112046957 n=1 Tax=Bicyc... [more]
UPI001E1DFDAE2.430e-2539.87uncharacterized protein LOC123533210 n=1 Tax=Merce... [more]
A0A820GD01_9BILA8.670e-2539.26Hypothetical protein n=2 Tax=Rotaria magnacalcarat... [more]
A0A7S3Y8J9_HETAK2.460e-2496.15Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A7D9K5Y4_PARCT1.540e-2338.46Reverse transcriptase domain-containing protein (F... [more]
A0A8H9CHX6_9GAMM1.760e-2336.71Reverse transcriptase domain-containing protein n=... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 42..159
e-value: 1.6E-20
score: 73.6
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 21..162
score: 8.83462
NoneNo IPR availablePANTHERPTHR19446REVERSE TRANSCRIPTASEScoord: 3..158
NoneNo IPR availablePANTHERPTHR19446:SF408LRRG00124coord: 3..158
NoneNo IPR availableCDDcd01650RT_nLTR_likecoord: 35..144
e-value: 2.44898E-31
score: 110.459
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 37..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig990contigH-akashiwo_Contig990:342203..342688 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig990.8.1mRNA_H-akashiwo_Contig990.8.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig990 342203..342688 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig990.8.1 ID=prot_H-akashiwo_Contig990.8.1|Name=mRNA_H-akashiwo_Contig990.8.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=162bp
AWVLKHCARQLARPLTRLFQKVGKSGEFPRSWKVARVTPVYKKKDASLPE
NYRPISVLPTLATTFERVLMKQLSSFLFGHIPPNQFGFLPGTGTVDVGVI
LADRISLALEARKDVRLVALDFKGAFDKVWWRGLLAHLWAVGVRSKAFKL
MQSYLSDRALFV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
IPR043502DNA/RNA_pol_sf