prot_H-akashiwo_Contig978.3.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-akashiwo_Contig978.3.1
Unique Name	prot_H-akashiwo_Contig978.3.1
Type	polypeptide
Organism	Heterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length	347

Homology

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BLAST of mRNA_H-akashiwo_Contig978.3.1 vs. uniprot
Match: A0A7S3UVU0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVU0_HETAK)

HSP 1 Score: 648 bits (1672), Expect = 1.120e-233
Identity = 345/347 (99.42%), Postives = 347/347 (100.00%), Query Frame = 0

Query:    1 MKSSVLNISPVVGCRDLKRPAKVGKEREQSSPNLKMFDLSTDLGPRLKPLSSPPQSPPSPSQSCTAFSLVYQPNEATAPNTRALSMRKLTSDPRKSNHFRNKAESESRIFNHSHSDTSLFEATGIPGPSRSSQTAAPLDRMTRQRQNTDPTRADYFFRANIARRRLRHPLQDVSARANLEKLNRAPQSKDISSLLTPGLMLDPSSIPAHCLELVSPVRTGRSTMEPTLNFAETADFVKRKESFATYVSRVRAAKARPPVTGTNAKPGLGAPKPKLNSVKMGLGLADFIPDSAGTGMQKAKKKGQINHFKYDEEQDVEAENGNSARKASXXXXXXAGRSVTWLRAEAA 347
            MKSSVLNISPVVGC+DLKRPAKVGKEREQSSPNLKMFDLSTDLGPRLKPLSSPPQSPPSPSQSCTAFSLVYQPNEATAPNTRALSMRKLTSDPRKSNHFRNKAESESRIFNHSHSDTSLFEATG+PGPSRSSQTAAPLDRMTRQRQNTDPTRADYFFRANIARRRLRHPLQDVSARANLEKLNRAPQSKDISSLLTPGLMLDPSSIPAHCLELVSPVRTGRSTMEPTLNFAETADFVKRKESFATYVSRVRAAKARPPVTGTNAKPGLGAPKPKLNSVKMGLGLADFIPDSAGTGMQKAKKKGQINHFKYDEEQDVEAENGNSARKASXXXXXXAGRSVTWLRAEAA
Sbjct:    1 MKSSVLNISPVVGCKDLKRPAKVGKEREQSSPNLKMFDLSTDLGPRLKPLSSPPQSPPSPSQSCTAFSLVYQPNEATAPNTRALSMRKLTSDPRKSNHFRNKAESESRIFNHSHSDTSLFEATGLPGPSRSSQTAAPLDRMTRQRQNTDPTRADYFFRANIARRRLRHPLQDVSARANLEKLNRAPQSKDISSLLTPGLMLDPSSIPAHCLELVSPVRTGRSTMEPTLNFAETADFVKRKESFATYVSRVRAAKARPPVTGTNAKPGLGAPKPKLNSVKMGLGLADFIPDSAGTGMQKAKKKGQINHFKYDEEQDVEAENGNSARKASXXXXXXAGRSVTWLRAEAA 347

[Close]

BLAST of mRNA_H-akashiwo_Contig978.3.1 vs. uniprot
Match: A0A7S3XMZ6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMZ6_HETAK)

HSP 1 Score: 476 bits (1225), Expect = 2.810e-167
Identity = 247/249 (99.20%), Postives = 249/249 (100.00%), Query Frame = 0

Query:    1 MKSSVLNISPVVGCRDLKRPAKVGKEREQSSPNLKMFDLSTDLGPRLKPLSSPPQSPPSPSQSCTAFSLVYQPNEATAPNTRALSMRKLTSDPRKSNHFRNKAESESRIFNHSHSDTSLFEATGIPGPSRSSQTAAPLDRMTRQRQNTDPTRADYFFRANIARRRLRHPLQDVSARANLEKLNRAPQSKDISSLLTPGLMLDPSSIPAHCLELVSPVRTGRSTMEPTLNFAETADFVKRKESFATYVSR 249
            MKSSVLNISPVVGC+DLKRPAKVGKEREQSSPNLKMFDLSTDLGPRLKPLSSPPQSPPSPSQSCTAFSLVYQPNEATAPNTRALSMRKLTSDPRKSNHFRNKAESESRIFNHSHSDTSLFEATG+PGPSRSSQTAAPLDRMTRQRQNTDPTRADYFFRANIARRRLRHPLQDVSARANLEKLNRAPQSKDISSLLTPGLMLDPSSIPAHCLELVSPVRTGRSTMEPTLNFAETADFVKRKESFATYVSR
Sbjct:    1 MKSSVLNISPVVGCKDLKRPAKVGKEREQSSPNLKMFDLSTDLGPRLKPLSSPPQSPPSPSQSCTAFSLVYQPNEATAPNTRALSMRKLTSDPRKSNHFRNKAESESRIFNHSHSDTSLFEATGLPGPSRSSQTAAPLDRMTRQRQNTDPTRADYFFRANIARRRLRHPLQDVSARANLEKLNRAPQSKDISSLLTPGLMLDPSSIPAHCLELVSPVRTGRSTMEPTLNFAETADFVKRKESFATYVSR 249

The following BLAST results are available for this feature:

BLAST of mRNA_H-akashiwo_Contig978.3.1 vs. uniprot

BLAST of mRNA_H-akashiwo_Contig978.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A7S3UVU0_HETAK	1.120e-233	99.42	Hypothetical protein (Fragment) n=1 Tax=Heterosigm...	[more]
A0A7S3XMZ6_HETAK	2.810e-167	99.20	Hypothetical protein (Fragment) n=1 Tax=Heterosigm...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 298..347
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..67
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 304..320
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..32

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-akashiwo_Contig978	contig	H-akashiwo_Contig978:138739..141576 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Heterosigma akashiwo CCMP452 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-akashiwo_Contig978.3.1	mRNA_H-akashiwo_Contig978.3.1	Heterosigma akashiwo CCMP452	mRNA	H-akashiwo_Contig978 138582..141576 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-akashiwo_Contig978.3.1 ID=prot_H-akashiwo_Contig978.3.1|Name=mRNA_H-akashiwo_Contig978.3.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=347bp
MKSSVLNISPVVGCRDLKRPAKVGKEREQSSPNLKMFDLSTDLGPRLKPL
SSPPQSPPSPSQSCTAFSLVYQPNEATAPNTRALSMRKLTSDPRKSNHFR
NKAESESRIFNHSHSDTSLFEATGIPGPSRSSQTAAPLDRMTRQRQNTDP
TRADYFFRANIARRRLRHPLQDVSARANLEKLNRAPQSKDISSLLTPGLM
LDPSSIPAHCLELVSPVRTGRSTMEPTLNFAETADFVKRKESFATYVSRV
RAAKARPPVTGTNAKPGLGAPKPKLNSVKMGLGLADFIPDSAGTGMQKAK
KKGQINHFKYDEEQDVEAENGNSARKASAGAGGGAGRSVTWLRAEAA