prot_H-akashiwo_Contig974.9.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig974.9.1
Unique Nameprot_H-akashiwo_Contig974.9.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length91
Homology
BLAST of mRNA_H-akashiwo_Contig974.9.1 vs. uniprot
Match: A0A140ECJ4_9STRA (NADH dehydrogenase subunit 11 n=1 Tax=Monodopsis sp. MarTras21 TaxID=1745953 RepID=A0A140ECJ4_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 1.360e-9
Identity = 29/51 (56.86%), Postives = 39/51 (76.47%), Query Frame = 0
Query:    4 RKSVSKAEKVFQGRAISCSFSSVFHLRKAGMKEADFQLVTRIFKVGILIPL 54
            R ++S AE V   RA+SCSF+SVFHL+KAGMK A+F  VTR+FK  ++ P+
Sbjct:  240 RPAMSSAEGVMSRRALSCSFTSVFHLQKAGMKAAEFARVTRLFKHAVIAPM 290          
BLAST of mRNA_H-akashiwo_Contig974.9.1 vs. uniprot
Match: A0A140ECJ3_9STRA (NADH dehydrogenase subunit 11 n=1 Tax=Vischeria sp. CAUP Q 202 TaxID=1805947 RepID=A0A140ECJ3_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 1.780e-9
Identity = 30/56 (53.57%), Postives = 39/56 (69.64%), Query Frame = 0
Query:    8 SKAEKVFQGRAISCSFSSVFHLRKAGMKEADFQLVTRIFKVGILIPLGAFGLLAGG 63
            S AE V   RA+SCSF+SVFHL+KAGM+  D Q VT +FK  +++P+  F   AGG
Sbjct:  234 SSAEAVMSRRALSCSFTSVFHLQKAGMRPKDLQKVTSVFKKAVVLPMAVF---AGG 286          
BLAST of mRNA_H-akashiwo_Contig974.9.1 vs. uniprot
Match: W7UBW7_9STRA (Nadh dehydrogenase subunit 11 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7UBW7_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 6.560e-8
Identity = 28/54 (51.85%), Postives = 36/54 (66.67%), Query Frame = 0
Query:    3 PRKSVSKAEKVFQGRAISCSFSSVFHLRKAGMKEADFQLVTRIFKVGILIPLGA 56
            P  S   A  V   RA+SCSF+SVFHL+KAGM   DFQ VT +FK  +++P+ A
Sbjct:  254 PPASQGAAMGVMSRRALSCSFTSVFHLQKAGMAPQDFQKVTSLFKRSVILPMAA 307          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig974.9.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A140ECJ4_9STRA1.360e-956.86NADH dehydrogenase subunit 11 n=1 Tax=Monodopsis s... [more]
A0A140ECJ3_9STRA1.780e-953.57NADH dehydrogenase subunit 11 n=1 Tax=Vischeria sp... [more]
W7UBW7_9STRA6.560e-851.85Nadh dehydrogenase subunit 11 n=2 Tax=Monodopsidac... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig974contigH-akashiwo_Contig974:340302..340685 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig974.9.1mRNA_H-akashiwo_Contig974.9.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig974 340066..340868 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig974.9.1 ID=prot_H-akashiwo_Contig974.9.1|Name=mRNA_H-akashiwo_Contig974.9.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=91bp
MEPRKSVSKAEKVFQGRAISCSFSSVFHLRKAGMKEADFQLVTRIFKVGI
LIPLGAFGLLAGGKFCWDRLSRDNTQNVFKGVYASKVNDS*
back to top