prot_H-akashiwo_Contig972.4.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig972.4.1
Unique Nameprot_H-akashiwo_Contig972.4.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length48
Homology
BLAST of mRNA_H-akashiwo_Contig972.4.1 vs. uniprot
Match: A0A7S3Y2D0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y2D0_HETAK)

HSP 1 Score: 89.0 bits (219), Expect = 7.780e-22
Identity = 44/48 (91.67%), Postives = 44/48 (91.67%), Query Frame = 0
Query:    1 MLEAPTEPFDSVHFDICRQHRGQMAVAETLRLFLEGSKRARDAGASAP 48
            MLEAPTEPFDSVHFDICRQHRGQMAVAETLRLFLEGSKRA  A A AP
Sbjct:   37 MLEAPTEPFDSVHFDICRQHRGQMAVAETLRLFLEGSKRATAADAPAP 84          
BLAST of mRNA_H-akashiwo_Contig972.4.1 vs. uniprot
Match: A0A4D9D9L7_9STRA (tRNA-synt_His domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D9L7_9STRA)

HSP 1 Score: 49.7 bits (117), Expect = 1.280e-5
Identity = 23/37 (62.16%), Postives = 26/37 (70.27%), Query Frame = 0
Query:    1 MLEAPTEPFDSVHFDICRQHRGQMAVAETLRLFLEGS 37
            +  A  EPF +VHFD+ R HRGQMA A  LRL LEGS
Sbjct:  198 VTHASLEPFQAVHFDMHRPHRGQMATAMNLRLLLEGS 234          
BLAST of mRNA_H-akashiwo_Contig972.4.1 vs. uniprot
Match: W7TTH8_9STRA (Histidine ammonia-lyase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TTH8_9STRA)

HSP 1 Score: 49.3 bits (116), Expect = 1.680e-5
Identity = 24/43 (55.81%), Postives = 28/43 (65.12%), Query Frame = 0
Query:    1 MLEAPTEPFDSVHFDICRQHRGQMAVAETLRLFLEGSKRARDA 43
            +  A  EPF ++HFD+ R HRGQMA A  LRL LEGS   R A
Sbjct:  210 VTHASMEPFQALHFDMHRPHRGQMATAMNLRLLLEGSAMVRPA 252          
BLAST of mRNA_H-akashiwo_Contig972.4.1 vs. uniprot
Match: A0A835Z9D3_9STRA (AA_TRNA_LIGASE_II domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9D3_9STRA)

HSP 1 Score: 47.4 bits (111), Expect = 8.430e-5
Identity = 20/33 (60.61%), Postives = 24/33 (72.73%), Query Frame = 0
Query:    6 TEPFDSVHFDICRQHRGQMAVAETLRLFLEGSK 38
            +EP    HFD+ RQHRGQM VAE +RL L GS+
Sbjct:  203 SEPLQGAHFDVYRQHRGQMEVAERVRLLLTGSR 235          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig972.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A7S3Y2D0_HETAK7.780e-2291.67Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A4D9D9L7_9STRA1.280e-562.16tRNA-synt_His domain-containing protein n=1 Tax=Na... [more]
W7TTH8_9STRA1.680e-555.81Histidine ammonia-lyase n=2 Tax=Nannochloropsis ga... [more]
A0A835Z9D3_9STRA8.430e-560.61AA_TRNA_LIGASE_II domain-containing protein (Fragm... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.200.10Fumarase/aspartase (Central domain)coord: 1..47
e-value: 2.9E-7
score: 31.7
IPR008948L-Aspartase-likeSUPERFAMILY48557L-aspartase-likecoord: 3..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig972contigH-akashiwo_Contig972:54340..57239 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig972.4.1mRNA_H-akashiwo_Contig972.4.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig972 54316..57239 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig972.4.1 ID=prot_H-akashiwo_Contig972.4.1|Name=mRNA_H-akashiwo_Contig972.4.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=48bp
MLEAPTEPFDSVHFDICRQHRGQMAVAETLRLFLEGSKRARDAGASAP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008948L-Aspartase-like