prot_H-akashiwo_Contig966.3.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig966.3.1
Unique Nameprot_H-akashiwo_Contig966.3.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length99
Homology
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BLAST of mRNA_H-akashiwo_Contig966.3.1 vs. uniprot
Match: A0A7S1YRX3_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YRX3_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 3.770e-13
Identity = 44/103 (42.72%), Postives = 57/103 (55.34%), Query Frame = 0 
Query:   19 LLQSSIGEEGSAGWQQ-GEAMPKTIVLCDLSEP--------------------------PAELPPFPVEFAEVEELDLSGNGLESLPP-LAVLQKLKRLYLGG 93
            +LQ  IGE GSA W Q G+ +PKT++LCDLS+                            A LPPFP EF+ +EELDLSGN L+S+P  +  L  L+ L+LGG
Sbjct:    3 MLQPPIGELGSANWDQVGDPIPKTLILCDLSDDCLSLLTTKHEGSKEDRNFSECTLLTASAVLPPFPEEFSIIEELDLSGNALDSIPDNINNLTNLRSLFLGG 105
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig966.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S1YRX3_9STRA3.770e-1342.72Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 32..99
e-value: 1.0E-6
score: 29.9
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 63..84
score: 8.31261
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 54..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig966contigH-akashiwo_Contig966:111017..111313 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig966.3.1mRNA_H-akashiwo_Contig966.3.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig966 111005..111313 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig966.3.1 ID=prot_H-akashiwo_Contig966.3.1|Name=mRNA_H-akashiwo_Contig966.3.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=99bp
MDLVWISLLSRARSGSHSLLQSSIGEEGSAGWQQGEAMPKTIVLCDLSEP
PAELPPFPVEFAEVEELDLSGNGLESLPPLAVLQKLKRLYLGGSLANNS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt