prot_H-akashiwo_Contig965.4.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig965.4.1
Unique Nameprot_H-akashiwo_Contig965.4.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length210
Homology
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BLAST of mRNA_H-akashiwo_Contig965.4.1 vs. uniprot
Match: A0A835Z5P1_9STRA (Phosphodiesterase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5P1_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 6.690e-5
Identity = 29/64 (45.31%), Postives = 41/64 (64.06%), Query Frame = 0 
Query:    1 MKDGTIVSGRSTGAGRAEVLPSNLAHVTAVVPQEKQRLEVLRRFMHTEPFPESCVVFVNEQHRV 64
            MK+G      +  AG A+ LP N+ H T +   + ++ E LRR MHT+PFPES +VFVN+ H+V
Sbjct:  740 MKEGYTYVVGNDNAG-ADGLPPNIKH-TIITSPKVRKFESLRRLMHTQPFPESVMVFVNDPHQV 801
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig965.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835Z5P1_9STRA6.690e-545.31Phosphodiesterase n=1 Tax=Tribonema minus TaxID=30... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 74..88
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 74..167

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig965contigH-akashiwo_Contig965:242447..260148 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig965.4.1mRNA_H-akashiwo_Contig965.4.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig965 242437..260251 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig965.4.1 ID=prot_H-akashiwo_Contig965.4.1|Name=mRNA_H-akashiwo_Contig965.4.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=210bp
MKDGTIVSGRSTGAGRAEVLPSNLAHVTAVVPQEKQRLEVLRRFMHTEPF
PESCVVFVNEQHRVEVGARRRAGAGAEAVRDGHRGGAAARRRQQGGPPRG
APPPAGRPPRHGGDDGAGGARPGRAAAEPRGELRPAHGRGALRAPRRPVW
TGGQPGHRAEPGHARTRFVAEKFARQLRVPFQEVEIKHARILLREQEVQS
NAAQEGEEK*
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