prot_H-akashiwo_Contig965.3.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig965.3.1
Unique Nameprot_H-akashiwo_Contig965.3.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length60
Homology
BLAST of mRNA_H-akashiwo_Contig965.3.1 vs. uniprot
Match: A0A359M0Z4_9BACT (ATP-dependent helicase n=1 Tax=Bryobacterales bacterium TaxID=2026791 RepID=A0A359M0Z4_9BACT)

HSP 1 Score: 60.1 bits (144), Expect = 4.500e-9
Identity = 32/48 (66.67%), Postives = 35/48 (72.92%), Query Frame = 0
Query:   16 LQANF---GILTPTSVQANALRPALAGRDVTIKAYTGSGKTLAFLLPL 60
            LQAN    G LTPT VQA A+ PAL GRDV   A TG+GKTLAFLLP+
Sbjct:   12 LQANLARHGFLTPTPVQAEAIPPALEGRDVVATAQTGTGKTLAFLLPI 59          
BLAST of mRNA_H-akashiwo_Contig965.3.1 vs. uniprot
Match: A0A533BLG2_9BACT (ATP-dependent RNA helicase n=1 Tax=Nitrospira sp. TaxID=70125 RepID=A0A533BLG2_9BACT)

HSP 1 Score: 58.5 bits (140), Expect = 1.580e-8
Identity = 33/60 (55.00%), Postives = 43/60 (71.67%), Query Frame = 0
Query:    1 SFQELGVTDEQILHNLQANFGILTPTSVQANALRPALAGRDVTIKAYTGSGKTLAFLLPL 60
            SF  LG++D  +L +L A  G+L PTS+QA A+ PAL GRDV   A TG+GKT AFL+P+
Sbjct:    8 SFHTLGLSD-LLLRDLTAA-GLLVPTSIQAQAIPPALEGRDVIGCAQTGTGKTAAFLIPM 65          
BLAST of mRNA_H-akashiwo_Contig965.3.1 vs. uniprot
Match: A0A0G0YKN0_9BACT (DEAD/DEAH box helicase domain protein n=2 Tax=Parcubacteria group TaxID=1794811 RepID=A0A0G0YKN0_9BACT)

HSP 1 Score: 57.8 bits (138), Expect = 2.960e-8
Identity = 30/60 (50.00%), Postives = 41/60 (68.33%), Query Frame = 0
Query:    1 SFQELGVTDEQILHNLQANFGILTPTSVQANALRPALAGRDVTIKAYTGSGKTLAFLLPL 60
            +F EL +      +   ANF  +TPT +QA AL+PALAGRD+   A TG+GKTLAF++P+
Sbjct:   15 TFTELPINTLMKKNLSDANF--ITPTPIQAEALKPALAGRDILGTAQTGTGKTLAFIIPI 72          
BLAST of mRNA_H-akashiwo_Contig965.3.1 vs. uniprot
Match: A0A521TKU8_9CHLR (DEAD/DEAH box helicase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A521TKU8_9CHLR)

HSP 1 Score: 57.8 bits (138), Expect = 2.990e-8
Identity = 30/60 (50.00%), Postives = 41/60 (68.33%), Query Frame = 0
Query:    1 SFQELGVTDEQILHNLQANFGILTPTSVQANALRPALAGRDVTIKAYTGSGKTLAFLLPL 60
            SF+ +GV  +  L  + A  G+ TPT +QA A+ P LAG+D+  +A TGSGKT+AFL PL
Sbjct:   54 SFESIGVPAD--LRAVLAERGVATPTPIQAAAIAPLLAGKDIIGQARTGSGKTIAFLAPL 111          
BLAST of mRNA_H-akashiwo_Contig965.3.1 vs. uniprot
Match: S9PJV3_9DELT (ATP-dependent RNA helicase RhlE n=3 Tax=Cystobacter TaxID=42 RepID=S9PJV3_9DELT)

HSP 1 Score: 57.8 bits (138), Expect = 2.990e-8
Identity = 32/60 (53.33%), Postives = 42/60 (70.00%), Query Frame = 0
Query:    1 SFQELGVTDEQILHNLQANFGILTPTSVQANALRPALAGRDVTIKAYTGSGKTLAFLLPL 60
            SF+ LG++DE +    +A F   +PT +QA A+ PALAGRDV   A TG+GKT A+LLPL
Sbjct:    4 SFKTLGLSDESLDAVRRARFA--SPTPIQAQAIPPALAGRDVIGCAATGTGKTAAYLLPL 61          
BLAST of mRNA_H-akashiwo_Contig965.3.1 vs. uniprot
Match: A0A535PWI1_9CHLR (DEAD/DEAH box helicase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535PWI1_9CHLR)

HSP 1 Score: 57.4 bits (137), Expect = 4.040e-8
Identity = 32/60 (53.33%), Postives = 38/60 (63.33%), Query Frame = 0
Query:    1 SFQELGVTDEQILHNLQANFGILTPTSVQANALRPALAGRDVTIKAYTGSGKTLAFLLPL 60
            SF + GV    +     A  GI  P  VQA A+ P LAGRDV I+A TGSGKTLAFL+P+
Sbjct:    3 SFADAGVRPHTLA--ALAALGITEPVPVQAQAIPPLLAGRDVVIEAPTGSGKTLAFLIPM 60          
BLAST of mRNA_H-akashiwo_Contig965.3.1 vs. uniprot
Match: A0A7V2HKY1_9BACT (DEAD/DEAH box helicase n=1 Tax=Bryobacteraceae bacterium TaxID=2212468 RepID=A0A7V2HKY1_9BACT)

HSP 1 Score: 57.0 bits (136), Expect = 5.530e-8
Identity = 28/43 (65.12%), Postives = 31/43 (72.09%), Query Frame = 0
Query:   18 ANFGILTPTSVQANALRPALAGRDVTIKAYTGSGKTLAFLLPL 60
            A  G   PT VQA A+ PALAGRDV   A TG+GKTLAFLLP+
Sbjct:   18 ARHGFQVPTPVQAQAIPPALAGRDVVATAQTGTGKTLAFLLPI 60          
BLAST of mRNA_H-akashiwo_Contig965.3.1 vs. uniprot
Match: H8MSJ2_CORCM (ATP-dependent RNA helicase n=26 Tax=Myxococcaceae TaxID=31 RepID=H8MSJ2_CORCM)

HSP 1 Score: 57.0 bits (136), Expect = 5.540e-8
Identity = 31/60 (51.67%), Postives = 42/60 (70.00%), Query Frame = 0
Query:    1 SFQELGVTDEQILHNLQANFGILTPTSVQANALRPALAGRDVTIKAYTGSGKTLAFLLPL 60
            SF+ LG++ E +    +A FG  TPT +QA A+ PAL+GRDV   A TG+GKT A+LLP+
Sbjct:    4 SFKSLGLSPETLGAVKRARFG--TPTPIQAQAIPPALSGRDVIGCAATGTGKTAAYLLPM 61          
BLAST of mRNA_H-akashiwo_Contig965.3.1 vs. uniprot
Match: A0A2M9N6W2_9BACL (DEAD-box ATP-dependent RNA helicase CshA n=23 Tax=Paenibacillus TaxID=44249 RepID=A0A2M9N6W2_9BACL)

HSP 1 Score: 57.0 bits (136), Expect = 5.560e-8
Identity = 28/60 (46.67%), Postives = 41/60 (68.33%), Query Frame = 0
Query:    1 SFQELGVTDEQILHNLQANFGILTPTSVQANALRPALAGRDVTIKAYTGSGKTLAFLLPL 60
            +F  LG+ ++  L +    FGI+TP+ VQA A+ P L G+DV   + TG+GKTLA+LLP+
Sbjct:    5 TFHTLGIAED--LSSRLTEFGIVTPSPVQAEAIPPILEGKDVLATSQTGTGKTLAYLLPV 62          
BLAST of mRNA_H-akashiwo_Contig965.3.1 vs. uniprot
Match: V9GD14_9BACL (ATP-dependent RNA helicase YfmL n=1 Tax=Paenibacillus sp. JCM 10914 TaxID=1236974 RepID=V9GD14_9BACL)

HSP 1 Score: 56.2 bits (134), Expect = 1.020e-7
Identity = 28/60 (46.67%), Postives = 41/60 (68.33%), Query Frame = 0
Query:    1 SFQELGVTDEQILHNLQANFGILTPTSVQANALRPALAGRDVTIKAYTGSGKTLAFLLPL 60
            +F  LG+ ++  L    A FGI+TP+ VQ+ A+ P L G+DV   + TG+GKTLA+LLP+
Sbjct:    5 TFHTLGIAED--LSARLAEFGIVTPSPVQSEAIPPILEGKDVLATSQTGTGKTLAYLLPV 62          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig965.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A359M0Z4_9BACT4.500e-966.67ATP-dependent helicase n=1 Tax=Bryobacterales bact... [more]
A0A533BLG2_9BACT1.580e-855.00ATP-dependent RNA helicase n=1 Tax=Nitrospira sp. ... [more]
A0A0G0YKN0_9BACT2.960e-850.00DEAD/DEAH box helicase domain protein n=2 Tax=Parc... [more]
A0A521TKU8_9CHLR2.990e-850.00DEAD/DEAH box helicase n=1 Tax=Chloroflexi bacteri... [more]
S9PJV3_9DELT2.990e-853.33ATP-dependent RNA helicase RhlE n=3 Tax=Cystobacte... [more]
A0A535PWI1_9CHLR4.040e-853.33DEAD/DEAH box helicase n=1 Tax=Chloroflexi bacteri... [more]
A0A7V2HKY1_9BACT5.530e-865.12DEAD/DEAH box helicase n=1 Tax=Bryobacteraceae bac... [more]
H8MSJ2_CORCM5.540e-851.67ATP-dependent RNA helicase n=26 Tax=Myxococcaceae ... [more]
A0A2M9N6W2_9BACL5.560e-846.67DEAD-box ATP-dependent RNA helicase CshA n=23 Tax=... [more]
V9GD14_9BACL1.020e-746.67ATP-dependent RNA helicase YfmL n=1 Tax=Paenibacil... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 1..60
e-value: 2.0E-17
score: 65.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..60
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 26..60
e-value: 9.7E-9
score: 35.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig965contigH-akashiwo_Contig965:216730..217689 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig965.3.1mRNA_H-akashiwo_Contig965.3.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig965 216730..217689 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig965.3.1 ID=prot_H-akashiwo_Contig965.3.1|Name=mRNA_H-akashiwo_Contig965.3.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=60bp
SFQELGVTDEQILHNLQANFGILTPTSVQANALRPALAGRDVTIKAYTGS
GKTLAFLLPL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR011545DEAD/DEAH_box_helicase_dom