prot_H-akashiwo_Contig95.16.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig95.16.1
Unique Nameprot_H-akashiwo_Contig95.16.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length157
Homology
BLAST of mRNA_H-akashiwo_Contig95.16.1 vs. uniprot
Match: A0A7S3YK06_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YK06_HETAK)

HSP 1 Score: 142 bits (359), Expect = 1.400e-37
Identity = 76/86 (88.37%), Postives = 78/86 (90.70%), Query Frame = 0
Query:    1 LGPAHRPSFRRIAASADRFVRFANGLMNETNALVASVMEKLPEIRQAQLRMKNVVEWLGLTDQEKQEVRERLE-GRRTLRDQLRCC 85
            LGPAHRPSFRRIAASADRFVRFANGLMNETNALVASVMEKLPEIRQAQLRMKNVVEWLGLTDQEKQEVRERLE   R++   L  C
Sbjct:  293 LGPAHRPSFRRIAASADRFVRFANGLMNETNALVASVMEKLPEIRQAQLRMKNVVEWLGLTDQEKQEVRERLEDAERSVTSSLLLC 378          
BLAST of mRNA_H-akashiwo_Contig95.16.1 vs. uniprot
Match: A0A7S2V482_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V482_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 1.760e-22
Identity = 53/90 (58.89%), Postives = 60/90 (66.67%), Query Frame = 0
Query:    5 HRPSFRRIAASADRFVRFANGLMNETNALVASVMEKLPEIRQAQLRMKNVVEWLGLTDQEKQEVRERL-EGRRTLRDQLRCCCAARRCTW 93
            HR SFRRI+     FVRFANGL+NETN+LVASVMEKLPEIR  Q  MKNVVEWLG  +Q + E+RERL E  R +   L  C       W
Sbjct:   10 HRSSFRRISMDTGEFVRFANGLLNETNSLVASVMEKLPEIRSIQQSMKNVVEWLGYDEQRRGEIRERLAEAERGVTSSLLLCNETVHMVW 99          
BLAST of mRNA_H-akashiwo_Contig95.16.1 vs. uniprot
Match: A0A7S3LCA5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LCA5_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 7.030e-19
Identity = 38/69 (55.07%), Postives = 58/69 (84.06%), Query Frame = 0
Query:    5 HRPSFRRIAASADRFVRFANGLMNETNALVASVMEKLPEIRQAQLRMKNVVEWLGLTDQEKQEVRERLE 73
            HRP+FRRI  + + F++FANG+MNETN L+A+VM+KLPEIR+AQ +MKN  EW  L++++++++ +RLE
Sbjct:   56 HRPAFRRITQNRESFIKFANGIMNETNTLIATVMQKLPEIREAQSKMKNHQEWGQLSEEQQKQITDRLE 124          
BLAST of mRNA_H-akashiwo_Contig95.16.1 vs. uniprot
Match: D8LU34_ECTSI (U-box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU34_ECTSI)

HSP 1 Score: 86.7 bits (213), Expect = 8.110e-17
Identity = 43/82 (52.44%), Postives = 60/82 (73.17%), Query Frame = 0
Query:    5 HRPSFRRIAASADRFVRFANGLMNETNALVASVMEKLPEIRQAQLRMKNVVEWLGLTDQEKQEVRERL-EGRRTLRDQLRCC 85
            HR +FRRI+    +FVRFANGLMNE+N+LVASVMEKLPE+R  QL+M++  +W  +T+ ++ E+ ER  E  R+L+  L  C
Sbjct:  664 HRSTFRRISQDTGKFVRFANGLMNESNSLVASVMEKLPEVRAVQLQMRDPAQWGAMTETQRNEIAERHDENERSLKSNLSLC 745          
BLAST of mRNA_H-akashiwo_Contig95.16.1 vs. uniprot
Match: A0A7S1GIE2_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GIE2_CYCTE)

HSP 1 Score: 85.9 bits (211), Expect = 1.390e-16
Identity = 38/69 (55.07%), Postives = 55/69 (79.71%), Query Frame = 0
Query:    5 HRPSFRRIAASADRFVRFANGLMNETNALVASVMEKLPEIRQAQLRMKNVVEWLGLTDQEKQEVRERLE 73
            HR +FRRI  + D F++FANG+MNETN+L+AS+MEKLP+IRQAQ++M N  +W  L D++++ +  RLE
Sbjct:  286 HRQAFRRITKNKDSFIKFANGIMNETNSLIASIMEKLPQIRQAQVQMANSQQWGALNDEQRETITSRLE 354          
BLAST of mRNA_H-akashiwo_Contig95.16.1 vs. uniprot
Match: A0A1Z5JH47_FISSO (Ubiquitin conjugation factor E4 B n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JH47_FISSO)

HSP 1 Score: 85.1 bits (209), Expect = 2.830e-16
Identity = 42/82 (51.22%), Postives = 60/82 (73.17%), Query Frame = 0
Query:    5 HRPSFRRIAASADRFVRFANGLMNETNALVASVMEKLPEIRQAQLRMKNVVEWLGLTDQEKQEVRERLE-GRRTLRDQLRCC 85
            HR +FRRI  + + F++FANG+MNETN L+A+VM+KLPEIR AQ +MKNV EW  L+++E+ ++  RLE   R ++  L  C
Sbjct:  795 HRSAFRRITQNKESFIKFANGIMNETNTLIATVMQKLPEIRSAQEQMKNVEEWGRLSEEEQSQITSRLEDSEREVKSALPLC 876          
BLAST of mRNA_H-akashiwo_Contig95.16.1 vs. uniprot
Match: B7FZ62_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FZ62_PHATC)

HSP 1 Score: 84.3 bits (207), Expect = 5.260e-16
Identity = 39/71 (54.93%), Postives = 54/71 (76.06%), Query Frame = 0
Query:    3 PAHRPSFRRIAASADRFVRFANGLMNETNALVASVMEKLPEIRQAQLRMKNVVEWLGLTDQEKQEVRERLE 73
            P HRP+FRRI      F++FANG++NETN L+A+VM+KLPEIR+AQ +MKN  +W  LT+ E+ +V  RL+
Sbjct:  825 PEHRPAFRRITQDRASFIKFANGIINETNTLIATVMQKLPEIREAQEKMKNQQDWGRLTEDEQSQVSSRLD 895          
BLAST of mRNA_H-akashiwo_Contig95.16.1 vs. uniprot
Match: W7TVR0_9STRA (Ubiquitin conjugation factor e4 b isoform 2 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TVR0_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 8.420e-16
Identity = 40/69 (57.97%), Postives = 51/69 (73.91%), Query Frame = 0
Query:    3 PAHRPSFRRIAASADRFVRFANGLMNETNALVASVMEKLPEIRQAQLRMKNVVEWLGLTDQEKQEVRER 71
            P HR +FRRI++   +F  FANGLMNETNALVASVMEKLPEIR  QL+MK+   W  + ++ + E+ ER
Sbjct:  200 PEHRRTFRRISSDTSQFTSFANGLMNETNALVASVMEKLPEIRSVQLQMKDSPAWAAMPEESRNEIMER 268          
BLAST of mRNA_H-akashiwo_Contig95.16.1 vs. uniprot
Match: A0A4D9D5M9_9STRA (U-box domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D5M9_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 9.710e-16
Identity = 40/69 (57.97%), Postives = 51/69 (73.91%), Query Frame = 0
Query:    3 PAHRPSFRRIAASADRFVRFANGLMNETNALVASVMEKLPEIRQAQLRMKNVVEWLGLTDQEKQEVRER 71
            P HR +FRRI++   +F  FANGLMNETNALVASVMEKLPEIR  QL+MK+   W  + ++ + E+ ER
Sbjct:  747 PEHRRTFRRISSDTSQFTSFANGLMNETNALVASVMEKLPEIRSVQLQMKDSPAWAAMPEESRNEIMER 815          
BLAST of mRNA_H-akashiwo_Contig95.16.1 vs. uniprot
Match: A0A7S2A739_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A739_TRICV)

HSP 1 Score: 82.8 bits (203), Expect = 1.680e-15
Identity = 41/82 (50.00%), Postives = 59/82 (71.95%), Query Frame = 0
Query:    5 HRPSFRRIAASADRFVRFANGLMNETNALVASVMEKLPEIRQAQLRMKNVVEWLGLTDQEKQEVRERLE-GRRTLRDQLRCC 85
            HR +FR+IAA  D F++FANG+MNETN+L+ASVMEKLPEIR+ Q++M N  EW  L ++ ++ +  R E    ++R +L  C
Sbjct:  347 HRGAFRKIAADKDSFIKFANGIMNETNSLIASVMEKLPEIRRVQVQMANPQEWAALGEERRETISGRHEENEESVRTELPLC 428          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig95.16.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3YK06_HETAK1.400e-3788.37Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2V482_9STRA1.760e-2258.89Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S3LCA5_9STRA7.030e-1955.07Hypothetical protein (Fragment) n=1 Tax=Amphora co... [more]
D8LU34_ECTSI8.110e-1752.44U-box domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A7S1GIE2_CYCTE1.390e-1655.07Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A1Z5JH47_FISSO2.830e-1651.22Ubiquitin conjugation factor E4 B n=2 Tax=Fistulif... [more]
B7FZ62_PHATC5.260e-1654.93Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
W7TVR0_9STRA8.420e-1657.97Ubiquitin conjugation factor e4 b isoform 2 n=1 Ta... [more]
A0A4D9D5M9_9STRA9.710e-1657.97U-box domain-containing protein n=3 Tax=Monodopsid... [more]
A0A7S2A739_TRICV1.680e-1550.00Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019474Ubiquitin conjugation factor E4, corePFAMPF10408Ufd2P_corecoord: 3..73
e-value: 4.7E-12
score: 45.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 96..157

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig95contigH-akashiwo_Contig95:417506..445758 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig95.16.1mRNA_H-akashiwo_Contig95.16.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig95 417506..445760 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig95.16.1 ID=prot_H-akashiwo_Contig95.16.1|Name=mRNA_H-akashiwo_Contig95.16.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=157bp
LGPAHRPSFRRIAASADRFVRFANGLMNETNALVASVMEKLPEIRQAQLR
MKNVVEWLGLTDQEKQEVRERLEGRRTLRDQLRCCCAARRCTWSVPDLGR
GDPAPVPAAGAAAPHGQHAHGRAAPPGRGQGARPEGGQPRGPELPAEGHA
AGADGHP
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019474Ub_conjug_fac_E4_core