prot_H-akashiwo_Contig93.41.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig93.41.1
Unique Nameprot_H-akashiwo_Contig93.41.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length388
Homology
BLAST of mRNA_H-akashiwo_Contig93.41.1 vs. uniprot
Match: D8LBA5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBA5_ECTSI)

HSP 1 Score: 125 bits (315), Expect = 4.190e-28
Identity = 67/117 (57.26%), Postives = 89/117 (76.07%), Query Frame = 0
Query:    1 MRLANSAEEFFTVQDVIEEIRDSKARHYLDTLPFELKTRHPSSEALRFVSEFARRTGDLRALSRVDLRVLALAYMLEVEANGAAHLRAAPLRQGTRVASSAKQGHDVAGVATPSSGP 117
            M LA++AE F+T+ +V+ EIRD KAR +L++LPFELK R PS EA++F + FAR+TGDLR+LSRVDL+V+ALAYMLE +  GA HLR AP+R GT+V S+ K      GV+ P+  P
Sbjct:   92 MTLASAAENFWTIPEVVAEIRDKKARQHLESLPFELKLREPSDEAMKFAASFARQTGDLRSLSRVDLKVIALAYMLERQETGAGHLRTAPIRPGTKVNSNRK------GVSAPTLAP 202          
BLAST of mRNA_H-akashiwo_Contig93.41.1 vs. uniprot
Match: A0A6H5KFQ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFQ3_9PHAE)

HSP 1 Score: 125 bits (315), Expect = 8.110e-28
Identity = 67/117 (57.26%), Postives = 89/117 (76.07%), Query Frame = 0
Query:    1 MRLANSAEEFFTVQDVIEEIRDSKARHYLDTLPFELKTRHPSSEALRFVSEFARRTGDLRALSRVDLRVLALAYMLEVEANGAAHLRAAPLRQGTRVASSAKQGHDVAGVATPSSGP 117
            M LA++AE F+T+ +V+ EIRD KAR +L++LPFELK R PS EA++F + FAR+TGDLR+LSRVDL+V+ALAYMLE +  GA HLR AP+R GT+V S+ K      GV+ P+  P
Sbjct:   92 MTLASAAENFWTIPEVVAEIRDKKARQHLESLPFELKLREPSDEAMKFAASFARQTGDLRSLSRVDLKVIALAYMLERQETGAVHLRTAPIRPGTKVNSNPK------GVSAPTLAP 202          
BLAST of mRNA_H-akashiwo_Contig93.41.1 vs. uniprot
Match: A0A2R5GL24_9STRA (RNA-binding protein NOB1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GL24_9STRA)

HSP 1 Score: 108 bits (269), Expect = 6.650e-22
Identity = 64/133 (48.12%), Postives = 86/133 (64.66%), Query Frame = 0
Query:    3 LANSAEEFFTVQDVIEEIRDSKARHYLDTLPFELKTRHPSSEALRFVSEFARRTGDLRALSRVDLRVLALAYMLEVEANGAAHLRAAPLRQGTRV-----ASSAKQGHDVAGVATPSSGPPDIAGDDPPQSSH 130
            L N A EF+TV++VI EIRD  AR  L+TLPF+LK R PS EAL  V  FA++TGDL  LS+ D+R++AL YML  E +G   LR  PLR GT       ASSA  GH  + ++TP+S   ++ G+  P +++
Sbjct:   50 LNNMANEFWTVREVISEIRDKNARRALETLPFDLKVREPSDEALAAVVAFAKKTGDLAVLSKPDIRIIALTYMLHKETHGVQGLRTTPLRPGTSASNASAASSASPGHSSS-ISTPASAADEVDGEPAPLAAN 181          
BLAST of mRNA_H-akashiwo_Contig93.41.1 vs. uniprot
Match: A0A080ZFK0_PHYPR (C3H1-type domain-containing protein n=1 Tax=Phytophthora parasitica P1976 TaxID=1317066 RepID=A0A080ZFK0_PHYPR)

HSP 1 Score: 100 bits (249), Expect = 1.070e-20
Identity = 53/88 (60.23%), Postives = 67/88 (76.14%), Query Frame = 0
Query:    3 LANSAEEFFTVQDVIEEIRDSKARHYLDTLPFELKTRHPSSEALRFVSEFARRTGDLRALSRVDLRVLALAYMLEVEANGAAHLRAAP 90
            LA  AE F+TV DV++EIRD K+R  L+ LPF L+TR PS+EA++ V  F+R+TGD   LS  DLRV+AL+Y LEVEANGA HLR +P
Sbjct:   68 LAVLAENFWTVPDVLDEIRDKKSRAILERLPFTLQTREPSAEAMKAVVNFSRKTGDFTYLSLTDLRVMALSYQLEVEANGADHLRTSP 155          
BLAST of mRNA_H-akashiwo_Contig93.41.1 vs. uniprot
Match: A0A835YK00_9STRA (Putative RNA binding protein NOB1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK00_9STRA)

HSP 1 Score: 103 bits (258), Expect = 1.090e-20
Identity = 56/88 (63.64%), Postives = 64/88 (72.73%), Query Frame = 0
Query:    3 LANSAEEFFTVQDVIEEIRDSKARHYLDTLPFELKTRHPSSEALRFVSEFARRTGDLRALSRVDLRVLALAYMLEVEANGAAHLRAAP 90
            L  SAE+F+TV  V+ EIRD KARH LDTLP+ELK R PS EAL F   FAR TGDLR+LSRVDL V+AL Y LE    GAAH++  P
Sbjct:   47 LVYSAEQFWTVPAVLAEIRDKKARHLLDTLPYELKLREPSEEALSFAIGFARETGDLRSLSRVDLSVIALTYDLEKRETGAAHVKKTP 134          
BLAST of mRNA_H-akashiwo_Contig93.41.1 vs. uniprot
Match: A0A7S1CNC8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CNC8_9STRA)

HSP 1 Score: 101 bits (252), Expect = 2.020e-20
Identity = 55/98 (56.12%), Postives = 66/98 (67.35%), Query Frame = 0
Query:    1 MRLANSAEEFFTVQDVIEEIRDSKARHYLDTLPFELKTRHPSSEALRFVSEFARRTGDLRALSRVDLRVLALAYMLEVEANGAAHLRAAPLRQGTRVA 98
            +RL   A  + TVQ VI+EIRD +AR  +  LPFEL  R PS +A+  V EFAR+TGD+R LSRVD  +LAL Y LEVE  G  HLR  PLR+G  VA
Sbjct:   84 VRLDGRARNYVTVQGVIDEIRDKRARAAMAALPFELSVRMPSEKAIAAVVEFARKTGDMRELSRVDTHILALTYQLEVETTGGKHLRTEPLRRGATVA 181          
BLAST of mRNA_H-akashiwo_Contig93.41.1 vs. uniprot
Match: A0A3M6VLE1_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VLE1_9STRA)

HSP 1 Score: 102 bits (254), Expect = 3.860e-20
Identity = 55/93 (59.14%), Postives = 69/93 (74.19%), Query Frame = 0
Query:    3 LANSAEEFFTVQDVIEEIRDSKARHYLDTLPFELKTRHPSSEALRFVSEFARRTGDLRALSRVDLRVLALAYMLEVEANGAAHLRAAPLRQGT 95
            LA  AE F+TV DV++EIRD K+R  L+ LPF L+TR PS+EA++ V  F+R+TGD   LS  DLRV+AL+Y LEVEANGA HLR +P R  T
Sbjct:   71 LAVLAENFWTVPDVLDEIRDKKSRAILERLPFNLQTREPSAEAMKAVVNFSRKTGDFTYLSLTDLRVMALSYQLEVEANGADHLRTSPERSQT 163          
BLAST of mRNA_H-akashiwo_Contig93.41.1 vs. uniprot
Match: A0A433DBR3_9FUNG (20S-pre-rRNA D-site endonuclease NOB1 n=2 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433DBR3_9FUNG)

HSP 1 Score: 101 bits (252), Expect = 7.390e-20
Identity = 54/112 (48.21%), Postives = 77/112 (68.75%), Query Frame = 0
Query:    3 LANSAEEFFTVQDVIEEIRDSKARHYLDTLPFELKTRHPSSEALRFVSEFARRTGDLRALSRVDLRVLALAYMLEVEANGAAHLRAAPLRQGTRVASSAKQGHDVAGVATPS 114
            LA+ AE+F+T+ +V+ EIRD ++R Y+  LPFE + + PS EA++ V  FA++TGD   LS VDL++LAL YMLEVEANG A LR  P++  T+  +  +Q H  +  AT S
Sbjct:   53 LAHLAEKFYTIPEVVAEIRDQRSREYMAILPFEFQIKTPSEEAIKAVVAFAKKTGDYTTLSVVDLKLLALVYMLEVEANGTARLRTEPMKATTQQGAIRRQPHQSSPAATKS 164          
BLAST of mRNA_H-akashiwo_Contig93.41.1 vs. uniprot
Match: A0A7S2GM14_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GM14_9STRA)

HSP 1 Score: 100 bits (250), Expect = 1.100e-19
Identity = 65/141 (46.10%), Postives = 91/141 (64.54%), Query Frame = 0
Query:    3 LANSAEEFFTVQDVIEEIRDSKARHYLDTLPFELKTRHPSSEALRFVSEFARRTGDLRALSRVDLRVLALAYMLEVEANGAAHLRAAPLR---QGTRVASSAKQGHDVAGVATPSSGPPDIAGDDPPQSSHSGQYSCNTIV 140
            LA+ A+EF+TV++VI EIRD+++R  L++LPF+L  + PS EA+ FV+ FA+++GD   LS VDL+VLAL YMLE + +G AHLR  P     QG       K GH V+G A  SS PP  +    P +S + + +CN  V
Sbjct:  134 LASKAKEFWTVREVINEIRDARSRQVLESLPFDLGFKEPSEEAMEFVASFAKQSGDYGTLSLVDLKVLALTYMLECQESGTAHLRDRPRNPRPQGKNF--QGKHGH-VSGAAALSSAPPPTS---LPTASAAPKPTCNVEV 268          
BLAST of mRNA_H-akashiwo_Contig93.41.1 vs. uniprot
Match: A0A261XUG5_9FUNG (Uncharacterized protein n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261XUG5_9FUNG)

HSP 1 Score: 101 bits (252), Expect = 1.640e-19
Identity = 59/114 (51.75%), Postives = 77/114 (67.54%), Query Frame = 0
Query:    3 LANSAEEFFTVQDVIEEIRDSKARHYLDTLPFELKTRHPSSEALRFVSEFARRTGDLRALSRVDLRVLALAYMLEVEANGAAHLRAAPLRQGTRVASSAKQGHDV--AGVATPS 114
            +A+ AE+F T+ +VI EIRD  AR YL TLPFEL+TR P  +A+  V +FA++TGD   LS VD++VLALAY LEVEANG + LR+ P++    V      GH +  AG A PS
Sbjct:   31 IAHLAEKFVTIPEVIHEIRDEAARQYLSTLPFELETRSPKDDAIHAVVDFAKKTGDYATLSVVDVKVLALAYTLEVEANGTSRLRSEPVKPQVAVG-----GHRIKPAGKANPS 139          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig93.41.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBA5_ECTSI4.190e-2857.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KFQ3_9PHAE8.110e-2857.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2R5GL24_9STRA6.650e-2248.12RNA-binding protein NOB1 n=1 Tax=Hondaea fermental... [more]
A0A080ZFK0_PHYPR1.070e-2060.23C3H1-type domain-containing protein n=1 Tax=Phytop... [more]
A0A835YK00_9STRA1.090e-2063.64Putative RNA binding protein NOB1 n=1 Tax=Tribonem... [more]
A0A7S1CNC8_9STRA2.020e-2056.12Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A3M6VLE1_9STRA3.860e-2059.14Uncharacterized protein n=2 Tax=Peronospora effusa... [more]
A0A433DBR3_9FUNG7.390e-2048.2120S-pre-rRNA D-site endonuclease NOB1 n=2 Tax=Jimg... [more]
A0A7S2GM14_9STRA1.100e-1946.10Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A261XUG5_9FUNG1.640e-1951.75Uncharacterized protein n=1 Tax=Bifiguratus adelai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033411Ribonuclease, PIN domainPFAMPF17146PIN_6coord: 2..76
e-value: 1.4E-24
score: 86.3
IPR033411Ribonuclease, PIN domainCDDcd09876PIN_Nob1-likecoord: 2..93
e-value: 4.43762E-38
score: 131.096
NoneNo IPR availableGENE3D3.40.50.1010coord: 2..104
e-value: 1.7E-25
score: 91.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 351..387
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 177..205
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 97..129
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 230..254
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 175..260
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 307..331
NoneNo IPR availablePANTHERPTHR12814:SF2RNA-BINDING PROTEIN NOB1coord: 2..210
IPR039907RNA-binding protein NOB1PANTHERPTHR12814RNA-BINDING PROTEIN NOB1coord: 2..210

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig93contigH-akashiwo_Contig93:1232391..1235051 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig93.41.1mRNA_H-akashiwo_Contig93.41.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig93 1232337..1248517 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig93.41.1 ID=prot_H-akashiwo_Contig93.41.1|Name=mRNA_H-akashiwo_Contig93.41.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=388bp
MRLANSAEEFFTVQDVIEEIRDSKARHYLDTLPFELKTRHPSSEALRFVS
EFARRTGDLRALSRVDLRVLALAYMLEVEANGAAHLRAAPLRQGTRVASS
AKQGHDVAGVATPSSGPPDIAGDDPPQSSHSGQYSCNTIVVCFIMNDFRV
YTSWAPALPASSFHNYICHAWPAGDGADEVEVDEISEDDSDEEEEEEDSE
EDEAAPCGEAGAGAGPGAANSGAGEGEEGQFGDAEGEEEEEGVGQFDDAE
EEEEGAAAAAVKVRTAAIALFGEEEEEFPALGGGGGARPPAAAPALAWGK
AAGGLAGGGGGRGGGGGGLPGRRPRAAAAGGGVGGRAAAGCGRGDRAAFF
AGGAGPGRRRGGAGRGGRRPRGGRAVAILGAAARGGP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033411Ribonuclease_PIN
IPR039907NOB1