prot_H-akashiwo_Contig920.6.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig920.6.1
Unique Nameprot_H-akashiwo_Contig920.6.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length89
Homology
BLAST of mRNA_H-akashiwo_Contig920.6.1 vs. uniprot
Match: A0A6V1QME2_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QME2_HETAK)

HSP 1 Score: 171 bits (432), Expect = 1.090e-50
Identity = 85/86 (98.84%), Postives = 85/86 (98.84%), Query Frame = 0
Query:    1 MGGAVGAAMSMNPDLIMWVPDSMVGLIIGRGGENIKRLSQSTGVNVQIEKQGEMHEGSMQRKVMLKGPPDAQQRCKGDILEMVHHR 86
            MGGAVGAAMSMNPDLIMWVPDSMVGLIIGRGGENIKRLSQSTGVNVQIEKQGEMHEGSMQRKVMLKGPPDAQQRCKGDILEMVH R
Sbjct:    5 MGGAVGAAMSMNPDLIMWVPDSMVGLIIGRGGENIKRLSQSTGVNVQIEKQGEMHEGSMQRKVMLKGPPDAQQRCKGDILEMVHDR 90          
BLAST of mRNA_H-akashiwo_Contig920.6.1 vs. uniprot
Match: A0A835ZE80_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE80_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 1.130e-11
Identity = 29/68 (42.65%), Postives = 49/68 (72.06%), Query Frame = 0
Query:   19 VPDSMVGLIIGRGGENIKRLSQSTGVNVQIEKQGEMHEGSMQRKVMLKGPPDAQQRCKGDILEMVHHR 86
            +P++MVG++IGRGGENI+R+ +  GVN+QI K  ++  G++ R + LKGPP A    K +++ +++ R
Sbjct:  230 IPNAMVGVVIGRGGENIQRIQREFGVNIQIAKSTDIPPGAVARPITLKGPPQALAAAKAEVMNLINDR 297          
BLAST of mRNA_H-akashiwo_Contig920.6.1 vs. uniprot
Match: A0A7S1CM10_9STRA (Branchpoint-bridging protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CM10_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 5.970e-11
Identity = 32/68 (47.06%), Postives = 46/68 (67.65%), Query Frame = 0
Query:   19 VPDSMVGLIIGRGGENIKRLSQSTGVNVQIEKQGEMHEGSMQRKVMLKGPPDAQQRCKGDILEMVHHR 86
            +PD MVGLIIGRGG+NI+ L   TG NVQ++++ +   G+ QRKV +KG  +A + C+  I  M+  R
Sbjct:  184 IPDHMVGLIIGRGGDNIRELQDRTGANVQVQREQDQAPGTNQRKVGIKGKEEAVRACQAAIEGMISMR 251          
BLAST of mRNA_H-akashiwo_Contig920.6.1 vs. uniprot
Match: A0A6P7GK66_DIAVI (far upstream element-binding protein 1-like isoform X1 n=4 Tax=Diabrotica virgifera virgifera TaxID=50390 RepID=A0A6P7GK66_DIAVI)

HSP 1 Score: 60.5 bits (145), Expect = 1.090e-8
Identity = 36/85 (42.35%), Postives = 46/85 (54.12%), Query Frame = 0
Query:    2 GGAVGAAMSMNPDLIMWVPDSMVGLIIGRGGENIKRLSQSTGVNVQIEKQGEMHEGSMQRKVMLKGPPDAQQRCKGDILEMVHHR 86
            GG       M+ D+   VPD MVGLIIGRGGE I RL   TG  +Q+    +   G   R   L GP DA +R K  I++++ HR
Sbjct:   90 GGGPPGMQQMSEDIK--VPDKMVGLIIGRGGEQITRLQSETGCKIQMAPDSQ---GMSDRICSLSGPKDAVERAKQLIIDIIRHR 169          
BLAST of mRNA_H-akashiwo_Contig920.6.1 vs. uniprot
Match: A0A7S4E6N5_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E6N5_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 1.460e-8
Identity = 32/71 (45.07%), Postives = 44/71 (61.97%), Query Frame = 0
Query:   19 VPDSMVGLIIGRGGENIKRLSQSTGVNVQIEKQGEMH---EGSMQRKVMLKGPPDAQQRCKGDILEMVHHR 86
            VP+ MVGL+IGRGGENIKRL+   GV VQ+ K+ E     +    R++ + G P+   R K D+ EM+  R
Sbjct:  269 VPNGMVGLVIGRGGENIKRLNLDFGVRVQVAKEAEPRKTPDAVETRRIAITGTPEGIDRAKKDLSEMIKTR 339          
BLAST of mRNA_H-akashiwo_Contig920.6.1 vs. uniprot
Match: A0A835YN15_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN15_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 2.740e-8
Identity = 27/68 (39.71%), Postives = 45/68 (66.18%), Query Frame = 0
Query:   19 VPDSMVGLIIGRGGENIKRLSQSTGVNVQIEKQGEMHEGSMQRKVMLKGPPDAQQRCKGDILEMVHHR 86
            +P+ MVG++IGRGGENI+++ +  GVN+QI K  ++  G+  R V LKGP  +    K ++ +++  R
Sbjct:  213 IPNEMVGVVIGRGGENIQKIQREYGVNIQIAKAQDVRPGATTRPVTLKGPKHSLVPAKAEVDKLIMER 280          
BLAST of mRNA_H-akashiwo_Contig920.6.1 vs. uniprot
Match: A0A674P4Q9_TAKRU (KH-type splicing regulatory protein n=2 Tax=Takifugu rubripes TaxID=31033 RepID=A0A674P4Q9_TAKRU)

HSP 1 Score: 58.5 bits (140), Expect = 5.060e-8
Identity = 34/67 (50.75%), Postives = 43/67 (64.18%), Query Frame = 0
Query:   19 VPDSMVGLIIGRGGENIKRLSQSTGVNVQIEKQGEMHE--GSMQRKVMLKGPPDAQQRCKGDILEMV 83
            VPD+MVGLIIGRGGE I ++ Q +G  VQ       H+  G  +R+V L GPPDA QR K  I ++V
Sbjct:   90 VPDAMVGLIIGRGGEQINKIQQESGCKVQFA-----HDTAGLPERRVSLTGPPDAIQRAKALIDDIV 151          
BLAST of mRNA_H-akashiwo_Contig920.6.1 vs. uniprot
Match: A0A6P7MPD9_BETSP (far upstream element-binding protein 2 isoform X1 n=5 Tax=Anabantoidei TaxID=50370 RepID=A0A6P7MPD9_BETSP)

HSP 1 Score: 58.5 bits (140), Expect = 5.120e-8
Identity = 36/77 (46.75%), Postives = 45/77 (58.44%), Query Frame = 0
Query:   10 SMNPDLIMW---VPDSMVGLIIGRGGENIKRLSQSTGVNVQIEKQGEMHEGSMQRKVMLKGPPDAQQRCKGDILEMV 83
            S+ P  +M    VPD+MVGLIIGRGGE I ++ Q +G  VQI        G  +R V L GPPDA  R K  I ++V
Sbjct:   95 SVRPSTVMEEYRVPDAMVGLIIGRGGEQINKIQQDSGCKVQIAHDSA---GLPERSVSLTGPPDAIMRAKALIDDVV 168          
BLAST of mRNA_H-akashiwo_Contig920.6.1 vs. uniprot
Match: A0A5C6N1P5_9TELE (Far upstream element-binding protein 2 n=3 Tax=Takifugu TaxID=31032 RepID=A0A5C6N1P5_9TELE)

HSP 1 Score: 58.5 bits (140), Expect = 5.120e-8
Identity = 34/67 (50.75%), Postives = 43/67 (64.18%), Query Frame = 0
Query:   19 VPDSMVGLIIGRGGENIKRLSQSTGVNVQIEKQGEMHE--GSMQRKVMLKGPPDAQQRCKGDILEMV 83
            VPD+MVGLIIGRGGE I ++ Q +G  VQ       H+  G  +R+V L GPPDA QR K  I ++V
Sbjct:  107 VPDAMVGLIIGRGGEQINKIQQESGCKVQFA-----HDTAGLPERRVSLTGPPDAIQRAKALIDDIV 168          
BLAST of mRNA_H-akashiwo_Contig920.6.1 vs. uniprot
Match: A0A6G1PAS9_9TELE (Far upstream element-binding protein 2 n=5 Tax=Percomorphaceae TaxID=1489872 RepID=A0A6G1PAS9_9TELE)

HSP 1 Score: 58.5 bits (140), Expect = 5.120e-8
Identity = 34/65 (52.31%), Postives = 40/65 (61.54%), Query Frame = 0
Query:   19 VPDSMVGLIIGRGGENIKRLSQSTGVNVQIEKQGEMHEGSMQRKVMLKGPPDAQQRCKGDILEMV 83
            VPDSMVGLIIGRGGE I ++ Q +G  VQI        G  +R V L G PDA QR K  I ++V
Sbjct:  105 VPDSMVGLIIGRGGEQINKIQQDSGCKVQIAHDSA---GLQERSVSLTGSPDAIQRAKALIDDIV 166          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig920.6.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6V1QME2_HETAK1.090e-5098.84Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A835ZE80_9STRA1.130e-1142.65Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A7S1CM10_9STRA5.970e-1147.06Branchpoint-bridging protein (Fragment) n=1 Tax=Bi... [more]
A0A6P7GK66_DIAVI1.090e-842.35far upstream element-binding protein 1-like isofor... [more]
A0A7S4E6N5_9STRA1.460e-845.07Hypothetical protein (Fragment) n=2 Tax=Pelagomona... [more]
A0A835YN15_9STRA2.740e-839.71Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A674P4Q9_TAKRU5.060e-850.75KH-type splicing regulatory protein n=2 Tax=Takifu... [more]
A0A6P7MPD9_BETSP5.120e-846.75far upstream element-binding protein 2 isoform X1 ... [more]
A0A5C6N1P5_9TELE5.120e-850.75Far upstream element-binding protein 2 n=3 Tax=Tak... [more]
A0A6G1PAS9_9TELE5.120e-852.31Far upstream element-binding protein 2 n=5 Tax=Per... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004087K Homology domainSMARTSM00322kh_6coord: 11..84
e-value: 3.9E-13
score: 59.6
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10K Homology domain, type 1coord: 15..81
e-value: 2.4E-20
score: 74.1
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 16..85
IPR004088K Homology domain, type 1PFAMPF00013KH_1coord: 17..80
e-value: 6.8E-18
score: 64.3
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 12..79
score: 15.933702
NoneNo IPR availableCDDcd00105KH-Icoord: 17..80
e-value: 3.47904E-15
score: 61.8071

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig920contigH-akashiwo_Contig920:319492..321747 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig920.6.1mRNA_H-akashiwo_Contig920.6.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig920 319492..321747 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig920.6.1 ID=prot_H-akashiwo_Contig920.6.1|Name=mRNA_H-akashiwo_Contig920.6.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=89bp
MGGAVGAAMSMNPDLIMWVPDSMVGLIIGRGGENIKRLSQSTGVNVQIEK
QGEMHEGSMQRKVMLKGPPDAQQRCKGDILEMVHHRAER
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004087KH_dom
IPR036612KH_dom_type_1_sf
IPR004088KH_dom_type_1