prot_H-akashiwo_Contig865.11.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig865.11.1
Unique Nameprot_H-akashiwo_Contig865.11.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length292
Homology
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BLAST of mRNA_H-akashiwo_Contig865.11.1 vs. uniprot
Match: A0A7S2XZ14_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZ14_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 5.800e-11
Identity = 37/78 (47.44%), Postives = 52/78 (66.67%), Query Frame = 0 
Query:    1 MARRLRPDKRAQLTTKFVIPLLTPIFLGAFFSHYILPIYEGYGDGGRQVIIVCSIVVLAISRGLCGMVMQSIAQLQAS 78
            MA RL   +R  L  KF IP++ P+ +   FSHY+LPIY    +  RQ I++  ++VLAI RG+CGM MQ++ QLQA+
Sbjct:  171 MAARLCYSQRKALAIKFGIPIVIPVIIAVIFSHYVLPIYTKSEEWIRQGIVLAVMIVLAIMRGVCGMCMQTLVQLQAN 248
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig865.11.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S2XZ14_9STRA5.800e-1147.44Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig865contigH-akashiwo_Contig865:466890..467765 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig865.11.1mRNA_H-akashiwo_Contig865.11.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig865 466824..468283 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig865.11.1 ID=prot_H-akashiwo_Contig865.11.1|Name=mRNA_H-akashiwo_Contig865.11.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=292bp
MARRLRPDKRAQLTTKFVIPLLTPIFLGAFFSHYILPIYEGYGDGGRQVI
IVCSIVVLAISRGLCGMVMQSIAQLQASKTFIIMSTIVALNSVLIRTLQA
GLGTLRGKVTNALILGVIEMSGTLFVPYGDFILYMLKNRTVKIPKGLAIP
RRRRVFADVVLMSNKLECSSVALANGIMFLVKTSYGHEADVGGALATFVV
STLLLLVVESLYEYLTYLWLARMENIPVLRCGKAQSRLNVRLLLFIMTMG
SLYFSSKVVPIVAASAGIDDTDVCLFCMDADVCYGDTLALL*
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