prot_H-akashiwo_Contig861.17.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig861.17.1
Unique Nameprot_H-akashiwo_Contig861.17.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length141
Homology
[Close]
BLAST of mRNA_H-akashiwo_Contig861.17.1 vs. uniprot
Match: D7FWI4_ECTSI (Histone H2A n=3 Tax=Ochrophyta TaxID=2696291 RepID=D7FWI4_ECTSI)

HSP 1 Score: 218 bits (556), Expect = 3.640e-71
Identity = 119/131 (90.84%), Postives = 128/131 (97.71%), Query Frame = 0 
Query:    1 SGKGGXXXXXXXXXXXPTSKRAPQSRSSRAGLQFPVGRIHRFLKQRVHAHQRVGATAAVYSAAILEYLTAEVLELAGNACKDLKVKRITPRHLQLAIRGDEELDTLIKATIAGGGVIPHIHKSLINKSSKQ 131
            SGKGG XXXXXXXXX PTSK+APQSRSS+AGLQFPVGRIHRFLK RVH+HQRVGAT+AVY+AAILEYLTAEVLELAGNACKDLKVKRITPRHLQLAIRGDEELDTLIKATIAGGGVIPHIHKSL+NK++K+
Sbjct:    2 SGKGGKXXXXXXXXXAPTSKKAPQSRSSKAGLQFPVGRIHRFLKSRVHSHQRVGATSAVYTAAILEYLTAEVLELAGNACKDLKVKRITPRHLQLAIRGDEELDTLIKATIAGGGVIPHIHKSLVNKTTKK 132
[Close]
BLAST of mRNA_H-akashiwo_Contig861.17.1 vs. uniprot
Match: A0A7S2LGK2_9STRA (Histone H2A n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LGK2_9STRA)

HSP 1 Score: 215 bits (548), Expect = 8.380e-70
Identity = 123/142 (86.62%), Postives = 130/142 (91.55%), Query Frame = 0 
Query:    1 SGKGGXXXXXXXXXXXPTSKRAPQSRSSRAGLQFPVGRIHRFLKQRVHAHQRVGATAAVYSAAILEYLTAEVLELAGNACKDLKVKRITPRHLQLAIRGDEELDTLIKATIAGGGVIPHIHKSLINKSSKQ---PKAPGGGK 139
            SGKGG XXXXXXXXX PTSK+APQSRSS+AGLQFPVGR+HRFLK  V + QRVGATAAVY++AILEYLTAEVLELAGNACKDLKVKRITPRHLQLAIRGDEELDTLIKATIAGGGVIPHIHKSLINKS+K    PK  GGGK
Sbjct:    2 SGKGGKXXXXXXXXXAPTSKKAPQSRSSKAGLQFPVGRVHRFLKTSVMSSQRVGATAAVYTSAILEYLTAEVLELAGNACKDLKVKRITPRHLQLAIRGDEELDTLIKATIAGGGVIPHIHKSLINKSNKGGVLPKKAGGGK 143
[Close]
BLAST of mRNA_H-akashiwo_Contig861.17.1 vs. uniprot
Match: F0XY44_AURAN (Histone H2A n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0XY44_AURAN)

HSP 1 Score: 210 bits (535), Expect = 6.160e-68
Identity = 118/133 (88.72%), Postives = 126/133 (94.74%), Query Frame = 0 
Query:    1 SGKGGXXXXXXXXXXXPTSKRAPQSRSSRAGLQFPVGRIHRFLKQRVHAHQRVGATAAVYSAAILEYLTAEVLELAGNACKDLKVKRITPRHLQLAIRGDEELDTLIKATIAGGGVIPHIHKSLINKSSKQPK 133
            SGKGG XXXXXXXXX PTSK+APQ++S +AGLQFPVGR+HRFLK RV A QRVGATAAVY+AAILEYLTAEVLELAGNACKDLK+KRITPRHLQLAIRGDEELDTLIKATIAGGGVIPHIHKSLINKSSK+ K
Sbjct:    2 SGKGGKXXXXXXXXXAPTSKKAPQTKSLKAGLQFPVGRLHRFLKLRVTASQRVGATAAVYTAAILEYLTAEVLELAGNACKDLKMKRITPRHLQLAIRGDEELDTLIKATIAGGGVIPHIHKSLINKSSKKKK 134
[Close]
BLAST of mRNA_H-akashiwo_Contig861.17.1 vs. uniprot
Match: A0A7S2GSD6_9STRA (Histone H2A n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2GSD6_9STRA)

HSP 1 Score: 210 bits (535), Expect = 1.040e-67
Identity = 119/134 (88.81%), Postives = 125/134 (93.28%), Query Frame = 0 
Query:    1 SGKGGXXXXXXXXXXXPTSKRAPQSRSSRAGLQFPVGRIHRFLKQRVHAHQRVGATAAVYSAAILEYLTAEVLELAGNACKDLKVKRITPRHLQLAIRGDEELDTLIKATIAGGGVIPHIHKSLINKSSKQPKA 134
            SGKGGXXXXXXXXXX PTSK+APQSRSS+AGLQFPVGR+HRFLK  V   QRVGATAAVY++AILEYLTAEVLELAGNACKDLKVKRITPRHLQLAIRGDEELDTLIKATIAGGGVIPHIHKSLINK SK  K+
Sbjct:   17 SGKGGXXXXXXXXXXAPTSKKAPQSRSSKAGLQFPVGRVHRFLKHSVQQSQRVGATAAVYTSAILEYLTAEVLELAGNACKDLKVKRITPRHLQLAIRGDEELDTLIKATIAGGGVIPHIHKSLINKQSKGKKS 150
[Close]
BLAST of mRNA_H-akashiwo_Contig861.17.1 vs. uniprot
Match: B7G2A5_PHATC (Histone H2A n=4 Tax=Bacillariophyta TaxID=2836 RepID=B7G2A5_PHATC)

HSP 1 Score: 207 bits (526), Expect = 1.550e-66
Identity = 116/133 (87.22%), Postives = 122/133 (91.73%), Query Frame = 0 
Query:    1 SGKGGXXXXXXXXXXXPTSKRAPQSRSSRAGLQFPVGRIHRFLKQRVHAHQRVGATAAVYSAAILEYLTAEVLELAGNACKDLKVKRITPRHLQLAIRGDEELDTLIKATIAGGGVIPHIHKSLINKSSKQPK 133
            SGKGG XXXXXXXXX PTSK+APQSRSS+AGLQFPVGR+HRFLK  VH   RVGATAAVY++AILEYLTAEVLELAGNACKDLKVKRITPRHLQLAIRGDEELD LIKATIAGGGVIPHIHKSLINKS  + K
Sbjct:    2 SGKGGKXXXXXXXXXAPTSKKAPQSRSSKAGLQFPVGRVHRFLKNSVHQGHRVGATAAVYTSAILEYLTAEVLELAGNACKDLKVKRITPRHLQLAIRGDEELDALIKATIAGGGVIPHIHKSLINKSQGKGK 134
[Close]
BLAST of mRNA_H-akashiwo_Contig861.17.1 vs. uniprot
Match: A0A482SNT5_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SNT5_9ARCH)

HSP 1 Score: 205 bits (521), Expect = 1.460e-65
Identity = 103/113 (91.15%), Postives = 109/113 (96.46%), Query Frame = 0 
Query:   17 PTSKRAPQSRSSRAGLQFPVGRIHRFLKQRVHAHQRVGATAAVYSAAILEYLTAEVLELAGNACKDLKVKRITPRHLQLAIRGDEELDTLIKATIAGGGVIPHIHKSLINKSS 129
            P SKRAPQSRSSRAGLQFPVGRIHRFLK RVH+ QRVGATAAVY++AI+EYLTAEVLELAGNACKDLKVKRITPRHL LAIRGDEELDTLIKATIAGGGVIPHIHKSLINK++
Sbjct:   25 PASKRAPQSRSSRAGLQFPVGRIHRFLKARVHSQQRVGATAAVYTSAIMEYLTAEVLELAGNACKDLKVKRITPRHLLLAIRGDEELDTLIKATIAGGGVIPHIHKSLINKTN 137
[Close]
BLAST of mRNA_H-akashiwo_Contig861.17.1 vs. uniprot
Match: A0A2R5GAR4_9STRA (Histone H2A n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GAR4_9STRA)

HSP 1 Score: 204 bits (519), Expect = 1.800e-65
Identity = 118/127 (92.91%), Postives = 121/127 (95.28%), Query Frame = 0 
Query:    1 SGKGGXXXXXXXXXXXPTSKRAPQSRSSRAGLQFPVGRIHRFLKQRVHAHQRVGATAAVYSAAILEYLTAEVLELAGNACKDLKVKRITPRHLQLAIRGDEELDTLIKATIAGGGVIPHIHKSLINK 127
            SGKGGXXXXXXXXXXXP SK+ PQSRSSRAGLQFPVGR+HRFLKQRV   QRVGATAAVY+AAILEYLTAEVLELAGNA KDLKVKRITPRHLQLAIRGDEELDTLIKATIAGGGVIPHIHKSLINK
Sbjct:    2 SGKGGXXXXXXXXXXXPASKKTPQSRSSRAGLQFPVGRVHRFLKQRVALKQRVGATAAVYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKATIAGGGVIPHIHKSLINK 128
[Close]
BLAST of mRNA_H-akashiwo_Contig861.17.1 vs. uniprot
Match: K0TER1_THAOC (Histone H2A n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TER1_THAOC)

HSP 1 Score: 203 bits (517), Expect = 1.580e-64
Identity = 116/133 (87.22%), Postives = 122/133 (91.73%), Query Frame = 0 
Query:    1 SGKGGXXXXXXXXXXXPTSKRAPQSRSSRAGLQFPVGRIHRFLKQRVHAHQRVGATAAVYSAAILEYLTAEVLELAGNACKDLKVKRITPRHLQLAIRGDEELDTLIKATIAGGGVIPHIHKSLINKSSKQPK 133
            SGKG XXXXXXXXXX PT K+APQSRSS+AGLQFPVGR+HRFLK  V   QRVGATAAVY++AILEYLTAEVLELAGNACKDLKVKRITPRHLQLAIRGDEELDTLIKATIAGGGVIPHIHKSLINKS  + K
Sbjct:   47 SGKGXXXXXXXXXXXAPTIKKAPQSRSSKAGLQFPVGRVHRFLKNSVQQSQRVGATAAVYTSAILEYLTAEVLELAGNACKDLKVKRITPRHLQLAIRGDEELDTLIKATIAGGGVIPHIHKSLINKSQGKTK 179
[Close]
BLAST of mRNA_H-akashiwo_Contig861.17.1 vs. uniprot
Match: A0A7S3PQG1_9STRA (Histone H2A n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PQG1_9STRA)

HSP 1 Score: 201 bits (512), Expect = 1.730e-64
Identity = 113/130 (86.92%), Postives = 119/130 (91.54%), Query Frame = 0 
Query:    1 SGKGGXXXXXXXXXXXPTSKRAPQSRSSRAGLQFPVGRIHRFLKQRVHAHQRVGATAAVYSAAILEYLTAEVLELAGNACKDLKVKRITPRHLQLAIRGDEELDTLIKATIAGGGVIPHIHKSLINKSSK 130
            SGKGG XXXXXXX   PTSK+APQSRSSRAGLQFPVGR+HRFLK R+ +  RVGATAAVY+AAILEYLTAEVLELAGNA KDLKVKRITPRHLQLAIRGDEELDTLIKATIAGGGVIPHIHKSL+NK  K
Sbjct:    2 SGKGGKXXXXXXX---PTSKKAPQSRSSRAGLQFPVGRVHRFLKARISSKNRVGATAAVYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKATIAGGGVIPHIHKSLVNKGKK 128
[Close]
BLAST of mRNA_H-akashiwo_Contig861.17.1 vs. uniprot
Match: B8BS24_THAPS (Histone H2A (Fragment) n=9 Tax=Bacillariophyta TaxID=2836 RepID=B8BS24_THAPS)

HSP 1 Score: 201 bits (510), Expect = 3.260e-64
Identity = 101/113 (89.38%), Postives = 108/113 (95.58%), Query Frame = 0 
Query:   17 PTSKRAPQSRSSRAGLQFPVGRIHRFLKQRVHAHQRVGATAAVYSAAILEYLTAEVLELAGNACKDLKVKRITPRHLQLAIRGDEELDTLIKATIAGGGVIPHIHKSLINKSS 129
            PT K+APQSRSS+AGLQFPVGR+HRFLK+ V   QRVGATAAVY++AILEYLTAEVLELAGNACKDLKVKRITPRHLQLAIRGDEELDTLIKATIAGGGVIPHIHKSLINKS+
Sbjct:   11 PTIKKAPQSRSSKAGLQFPVGRVHRFLKKSVQQSQRVGATAAVYTSAILEYLTAEVLELAGNACKDLKVKRITPRHLQLAIRGDEELDTLIKATIAGGGVIPHIHKSLINKST 123
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig861.17.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWI4_ECTSI3.640e-7190.84Histone H2A n=3 Tax=Ochrophyta TaxID=2696291 RepID... [more]
A0A7S2LGK2_9STRA8.380e-7086.62Histone H2A n=1 Tax=Leptocylindrus danicus TaxID=1... [more]
F0XY44_AURAN6.160e-6888.72Histone H2A n=2 Tax=Pelagomonadales TaxID=54409 Re... [more]
A0A7S2GSD6_9STRA1.040e-6788.81Histone H2A n=1 Tax=Helicotheca tamesis TaxID=3740... [more]
B7G2A5_PHATC1.550e-6687.22Histone H2A n=4 Tax=Bacillariophyta TaxID=2836 Rep... [more]
A0A482SNT5_9ARCH1.460e-6591.15Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A2R5GAR4_9STRA1.800e-6592.91Histone H2A n=1 Tax=Hondaea fermentalgiana TaxID=2... [more]
K0TER1_THAOC1.580e-6487.22Histone H2A n=1 Tax=Thalassiosira oceanica TaxID=1... [more]
A0A7S3PQG1_9STRA1.730e-6486.92Histone H2A n=1 Tax=Aplanochytrium stocchinoi TaxI... [more]
B8BS24_THAPS3.260e-6489.38Histone H2A (Fragment) n=9 Tax=Bacillariophyta Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002119Histone H2APRINTSPR00620HISTONEH2Acoord: 22..44
score: 69.81
coord: 52..67
score: 71.79
coord: 67..80
score: 84.01
coord: 81..95
score: 65.78
coord: 108..126
score: 52.43
IPR002119Histone H2ASMARTSM00414h2a4coord: 11..131
e-value: 4.8E-70
score: 248.7
IPR002119Histone H2APANTHERPTHR23430HISTONE H2Acoord: 14..129
IPR002119Histone H2ACDDcd00074H2Acoord: 20..127
e-value: 2.78269E-58
score: 174.446
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 14..100
e-value: 1.6E-19
score: 70.6
IPR032454Histone H2A, C-terminal domainPFAMPF16211Histone_H2A_Ccoord: 101..133
e-value: 7.6E-13
score: 48.0
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 6..136
e-value: 7.9E-59
score: 199.1
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 8..108
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..31
NoneNo IPR availablePANTHERPTHR23430:SF300HISTONE H2Acoord: 14..129
IPR032458Histone H2A conserved sitePROSITEPS00046HISTONE_H2Acoord: 30..36

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig861contigH-akashiwo_Contig861:360722..361366 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig861.17.1mRNA_H-akashiwo_Contig861.17.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig861 360414..361366 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig861.17.1 ID=prot_H-akashiwo_Contig861.17.1|Name=mRNA_H-akashiwo_Contig861.17.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=141bp
SGKGGKGGKGGKGGKAPTSKRAPQSRSSRAGLQFPVGRIHRFLKQRVHAH
QRVGATAAVYSAAILEYLTAEVLELAGNACKDLKVKRITPRHLQLAIRGD
EELDTLIKATIAGGGVIPHIHKSLINKSSKQPKAPGGGKH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002119Histone_H2A
IPR007125Histone_H2A/H2B/H3
IPR032454Histone_H2A_C
IPR009072Histone-fold
IPR032458Histone_H2A_CS