prot_H-akashiwo_Contig837.4.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig837.4.1
Unique Nameprot_H-akashiwo_Contig837.4.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length236
Homology
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BLAST of mRNA_H-akashiwo_Contig837.4.1 vs. uniprot
Match: A0A7S4D5M9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D5M9_HETAK)

HSP 1 Score: 155 bits (392), Expect = 2.180e-44
Identity = 91/138 (65.94%), Postives = 103/138 (74.64%), Query Frame = 0 
Query:   80 RISLCAATGQTAAVLRGLSGWQESTEAGCGGSV-MGKVKQFFQRAEGLLSGKEQ-LPKEVLVAKICTDVASWVLQRNFEVHCSTT---QQVNDDST-TTRNFGMVLFDEKNDCFYLRCTNMTTPPAQQPKLATTNIIV 211
            RISLC ATGQTAA LRGL+ WQE TEAG GGSV MGKVKQFFQRAEG LSGKEQ L KE   +K C+DVA WVLQRNFEVHCSTT   QQVNDD   TTRNFG+VLFDE+ +C      N+    ++Q    +++IIV
Sbjct:    1 RISLCGATGQTAATLRGLNAWQE-TEAGRGGSVVMGKVKQFFQRAEGFLSGKEQQLSKEDFFSKTCSDVALWVLQRNFEVHCSTTEQRQQVNDDDAITTRNFGIVLFDEEKNC---PPRNLEFDKSEQQTTLSSSIIV 134
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig837.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S4D5M9_HETAK2.180e-4465.94Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig837contigH-akashiwo_Contig837:217012..217719 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig837.4.1mRNA_H-akashiwo_Contig837.4.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig837 216894..218003 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig837.4.1 ID=prot_H-akashiwo_Contig837.4.1|Name=mRNA_H-akashiwo_Contig837.4.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=236bp
MQHNVPKRVLGRIMAEKRDSTGRFVGFDQALPFLASRQEWHDLFVFASCC
REFRVAACKFARLQVPQHDIIQTRDFPRERISLCAATGQTAAVLRGLSGW
QESTEAGCGGSVMGKVKQFFQRAEGLLSGKEQLPKEVLVAKICTDVASWV
LQRNFEVHCSTTQQVNDDSTTTRNFGMVLFDEKNDCFYLRCTNMTTPPAQ
QPKLATTNIIVDQYSTGPFHFSNRKRFSPFEDFSF*
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