prot_H-akashiwo_Contig831.7.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig831.7.1
Unique Nameprot_H-akashiwo_Contig831.7.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length48
Homology
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BLAST of mRNA_H-akashiwo_Contig831.7.1 vs. uniprot
Match: A0A7S3XSQ8_HETAK (Dynein light intermediate chain (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XSQ8_HETAK)

HSP 1 Score: 100 bits (248), Expect = 4.130e-24
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 0 
Query:    1 QVANDELFIPSGWDTMKLIEDLEQAKTSWAPDAAFETVITPPAESLEE 48
            QVANDELFIPSGWDTMKLIEDLEQAKTSWAPDAAFETVITPPAESLEE
Sbjct:  281 QVANDELFIPSGWDTMKLIEDLEQAKTSWAPDAAFETVITPPAESLEE 328
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BLAST of mRNA_H-akashiwo_Contig831.7.1 vs. uniprot
Match: A0A7S2V3Z7_9STRA (Dynein light intermediate chain n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3Z7_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 1.160e-9
Identity = 27/47 (57.45%), Postives = 35/47 (74.47%), Query Frame = 0 
Query:    1 QVANDELFIPSGWDTMKLIEDLEQAKTSWAPDAAFETVITPPAESLE 47
            +VAND +FIPSGWD+  LIEDL+QAK+ W  DA ++ VI  P + LE
Sbjct:  128 KVANDSVFIPSGWDSPSLIEDLKQAKSPWEADATYDQVIRIPTDVLE 174
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig831.7.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7S3XSQ8_HETAK4.130e-24100.00Dynein light intermediate chain (Fragment) n=1 Tax... [more]
A0A7S2V3Z7_9STRA1.160e-957.45Dynein light intermediate chain n=1 Tax=Fibrocapsa... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022780Dynein family light intermediate chainPFAMPF05783DLICcoord: 2..42
e-value: 2.8E-5
score: 23.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig831contigH-akashiwo_Contig831:154980..155282 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig831.7.1mRNA_H-akashiwo_Contig831.7.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig831 154980..155284 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig831.7.1 ID=prot_H-akashiwo_Contig831.7.1|Name=mRNA_H-akashiwo_Contig831.7.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=48bp
QVANDELFIPSGWDTMKLIEDLEQAKTSWAPDAAFETVITPPAESLEE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022780Dynein_light_int_chain