prot_H-akashiwo_Contig812.5.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig812.5.1
Unique Nameprot_H-akashiwo_Contig812.5.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length55
Homology
BLAST of mRNA_H-akashiwo_Contig812.5.1 vs. uniprot
Match: A0A6U1NIU1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1NIU1_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 2.820e-24
Identity = 46/53 (86.79%), Postives = 50/53 (94.34%), Query Frame = 0
Query:    1 MFRVELDANQQVVLATISGKIRKNFVKILVGDKVQVELSPYDLTRGRITFRYR 53
            MFRVEL+ANQ V+L TISGKIRKNFVK+LVGD V+VELSPYDLTRGRITFRYR
Sbjct:  108 MFRVELEANQNVILCTISGKIRKNFVKVLVGDSVRVELSPYDLTRGRITFRYR 160          
BLAST of mRNA_H-akashiwo_Contig812.5.1 vs. uniprot
Match: A0A6U4W0K7_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4W0K7_HEMAN)

HSP 1 Score: 92.8 bits (229), Expect = 7.160e-23
Identity = 43/53 (81.13%), Postives = 50/53 (94.34%), Query Frame = 0
Query:    1 MFRVELDANQQVVLATISGKIRKNFVKILVGDKVQVELSPYDLTRGRITFRYR 53
            MFRVELDANQQV+LA ISGKIRKN++KIL GDKV +E+SPYDLT+GRITFRY+
Sbjct:   86 MFRVELDANQQVILAHISGKIRKNYIKILPGDKVTMEISPYDLTKGRITFRYK 138          
BLAST of mRNA_H-akashiwo_Contig812.5.1 vs. uniprot
Match: A0A7S4KRC9_GUITH (Hypothetical protein n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4KRC9_GUITH)

HSP 1 Score: 92.4 bits (228), Expect = 1.190e-22
Identity = 44/53 (83.02%), Postives = 49/53 (92.45%), Query Frame = 0
Query:    1 MFRVELDANQQVVLATISGKIRKNFVKILVGDKVQVELSPYDLTRGRITFRYR 53
            MFRVEL+ANQQV+LA ISGKIRKNF+KIL GDKV  ELSPYDLT+GRITFRY+
Sbjct:   92 MFRVELEANQQVILAHISGKIRKNFIKILPGDKVTCELSPYDLTKGRITFRYK 144          
BLAST of mRNA_H-akashiwo_Contig812.5.1 vs. uniprot
Match: A0A7S0F076_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0F076_9CRYP)

HSP 1 Score: 92.4 bits (228), Expect = 1.430e-22
Identity = 44/53 (83.02%), Postives = 49/53 (92.45%), Query Frame = 0
Query:    1 MFRVELDANQQVVLATISGKIRKNFVKILVGDKVQVELSPYDLTRGRITFRYR 53
            MFRVEL+ANQQV+LA ISGKIRKNF+KIL GDKV  ELSPYDLT+GRITFRY+
Sbjct:   99 MFRVELEANQQVILAHISGKIRKNFIKILPGDKVTCELSPYDLTKGRITFRYK 151          
BLAST of mRNA_H-akashiwo_Contig812.5.1 vs. uniprot
Match: A0A835YXL6_9STRA (S1-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXL6_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 3.990e-21
Identity = 41/53 (77.36%), Postives = 47/53 (88.68%), Query Frame = 0
Query:    1 MFRVELDANQQVVLATISGKIRKNFVKILVGDKVQVELSPYDLTRGRITFRYR 53
            MFRVE+    Q++L TISGKIRKNFV+ILVGD V+VELSPYDLTRGRITFRY+
Sbjct:   92 MFRVEISPTNQIILCTISGKIRKNFVRILVGDPVKVELSPYDLTRGRITFRYK 144          
BLAST of mRNA_H-akashiwo_Contig812.5.1 vs. uniprot
Match: A0A7S4EBF0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EBF0_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 7.690e-21
Identity = 43/52 (82.69%), Postives = 47/52 (90.38%), Query Frame = 0
Query:    2 FRVELDANQQVVLATISGKIRKNFVKILVGDKVQVELSPYDLTRGRITFRYR 53
            FRVE+ A +QV+L TISGKIRKNFVKILVGD V+VELSPYDLTRGRITFR R
Sbjct:   78 FRVEIGATKQVLLCTISGKIRKNFVKILVGDSVKVELSPYDLTRGRITFRER 129          
BLAST of mRNA_H-akashiwo_Contig812.5.1 vs. uniprot
Match: D7G916_ECTSI (S1-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G916_ECTSI)

HSP 1 Score: 87.0 bits (214), Expect = 1.120e-20
Identity = 42/53 (79.25%), Postives = 48/53 (90.57%), Query Frame = 0
Query:    1 MFRVELDANQQVVLATISGKIRKNFVKILVGDKVQVELSPYDLTRGRITFRYR 53
            MFRVE+ A  +VVL TISG+IRKNFV+ILVGD V+VELSPYDLTRGRITFRY+
Sbjct:   78 MFRVEVGATGKVVLCTISGRIRKNFVRILVGDPVRVELSPYDLTRGRITFRYK 130          
BLAST of mRNA_H-akashiwo_Contig812.5.1 vs. uniprot
Match: A0A8J9SSB7_PHATR (Hypothetical protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9SSB7_PHATR)

HSP 1 Score: 85.1 bits (209), Expect = 1.390e-20
Identity = 44/56 (78.57%), Postives = 47/56 (83.93%), Query Frame = 0
Query:    1 MFRVELD---ANQQVVLATISGKIRKNFVKILVGDKVQVELSPYDLTRGRITFRYR 53
            MFR ++D     Q  VLATISGKIRKNFVKILVGDKV +ELSPYDLTRGRITFRYR
Sbjct:   19 MFRCQIDDAPETQAPVLATISGKIRKNFVKILVGDKVLIELSPYDLTRGRITFRYR 74          
BLAST of mRNA_H-akashiwo_Contig812.5.1 vs. uniprot
Match: A0A7S0QCQ7_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QCQ7_9CRYP)

HSP 1 Score: 87.0 bits (214), Expect = 1.650e-20
Identity = 40/53 (75.47%), Postives = 49/53 (92.45%), Query Frame = 0
Query:    1 MFRVELDANQQVVLATISGKIRKNFVKILVGDKVQVELSPYDLTRGRITFRYR 53
            MFRVEL+AN+QV+LA ISG+IRKN++KIL GDKV  ELSPYDLT+GRITFR++
Sbjct:   94 MFRVELEANKQVILAHISGRIRKNYIKILPGDKVTCELSPYDLTKGRITFRFK 146          
BLAST of mRNA_H-akashiwo_Contig812.5.1 vs. uniprot
Match: A0A6H5KG72_9PHAE (S1-like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG72_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 3.260e-20
Identity = 42/53 (79.25%), Postives = 48/53 (90.57%), Query Frame = 0
Query:    1 MFRVELDANQQVVLATISGKIRKNFVKILVGDKVQVELSPYDLTRGRITFRYR 53
            MFRVE+ A  +VVL TISG+IRKNFV+ILVGD V+VELSPYDLTRGRITFRY+
Sbjct:  121 MFRVEVGATGKVVLCTISGRIRKNFVRILVGDPVRVELSPYDLTRGRITFRYK 173          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig812.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6U1NIU1_9STRA2.820e-2486.79Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6U4W0K7_HEMAN7.160e-2381.13Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A7S4KRC9_GUITH1.190e-2283.02Hypothetical protein n=2 Tax=Guillardia theta TaxI... [more]
A0A7S0F076_9CRYP1.430e-2283.02Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A835YXL6_9STRA3.990e-2177.36S1-like domain-containing protein n=1 Tax=Tribonem... [more]
A0A7S4EBF0_9STRA7.690e-2182.69Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
D7G916_ECTSI1.120e-2079.25S1-like domain-containing protein n=1 Tax=Ectocarp... [more]
A0A8J9SSB7_PHATR1.390e-2078.57Hypothetical protein n=2 Tax=Phaeodactylum tricorn... [more]
A0A7S0QCQ7_9CRYP1.650e-2075.47Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
A0A6H5KG72_9PHAE3.260e-2079.25S1-like domain-containing protein n=1 Tax=Ectocarp... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012340Nucleic acid-binding, OB-foldGENE3D2.40.50.140coord: 1..54
e-value: 5.2E-25
score: 88.9
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 1..52
IPR006196RNA-binding domain, S1, IF1 typePFAMPF01176eIF-1acoord: 1..51
e-value: 2.9E-18
score: 65.4
IPR006196RNA-binding domain, S1, IF1 typePROSITEPS50832S1_IF1_TYPEcoord: 13..53
score: 14.589411
IPR004368Translation initiation factor IF-1TIGRFAMTIGR00008TIGR00008coord: 1..52
e-value: 2.0E-25
score: 86.5
IPR004368Translation initiation factor IF-1PANTHERPTHR33370TRANSLATION INITIATION FACTOR IF-1, CHLOROPLASTICcoord: 1..53
IPR004368Translation initiation factor IF-1CDDcd04451S1_IF1coord: 1..51
e-value: 1.52035E-25
score: 86.4205
NoneNo IPR availablePANTHERPTHR33370:SF1TRANSLATION INITIATION FACTOR IF-1, CHLOROPLASTICcoord: 1..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig812contigH-akashiwo_Contig812:267849..280948 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig812.5.1mRNA_H-akashiwo_Contig812.5.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig812 267555..280972 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig812.5.1 ID=prot_H-akashiwo_Contig812.5.1|Name=mRNA_H-akashiwo_Contig812.5.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=55bp
MFRVELDANQQVVLATISGKIRKNFVKILVGDKVQVELSPYDLTRGRITF
RYRA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012340NA-bd_OB-fold
IPR006196RNA-binding_domain_S1_IF1
IPR004368TIF_IF1