prot_H-akashiwo_Contig811.14.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-akashiwo_Contig811.14.1
Unique Name	prot_H-akashiwo_Contig811.14.1
Type	polypeptide
Organism	Heterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length	258

Homology

[Close]

BLAST of mRNA_H-akashiwo_Contig811.14.1 vs. uniprot
Match: A0A7S2V9P4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V9P4_9STRA)

HSP 1 Score: 281 bits (719), Expect = 3.880e-93
Identity = 141/160 (88.12%), Postives = 151/160 (94.38%), Query Frame = 0

Query:    1 MPTIAQNRNYRKTSKTPRRPFEKERLDQELKLCGEYGLRCKREIWRVQFTLAKIRKAARELLTLDPKDPRRLFEGPALLRRMVRYGLLNEDEKELDFVLQLSTQKILERRLQTKVFKQSLAKSIHHARVLIKQRHIRVGKQLVNVPSFMVRLDAEKHVDL 160
            MP I+  RN+RKTSKTPRRP+EKERLDQELKLCGEYGLRCKREIWRVQ  LAKIRKAARELLTL+PKDPRRLFEGPALLRRM RYGLL +DEKELDFVLQLSTQK+LERRLQTKVFKQ LAKSIHHARVLIKQRHIRVGKQLVNVPSF+VR+D+EKH+D 
Sbjct:    1 MPKISARRNHRKTSKTPRRPYEKERLDQELKLCGEYGLRCKREIWRVQLALAKIRKAARELLTLEPKDPRRLFEGPALLRRMSRYGLLMDDEKELDFVLQLSTQKLLERRLQTKVFKQGLAKSIHHARVLIKQRHIRVGKQLVNVPSFLVRMDSEKHIDF 160

[Close]

BLAST of mRNA_H-akashiwo_Contig811.14.1 vs. uniprot
Match: A0A836CIZ7_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIZ7_9STRA)

HSP 1 Score: 276 bits (706), Expect = 3.550e-91
Identity = 138/160 (86.25%), Postives = 148/160 (92.50%), Query Frame = 0

Query:    1 MPTIAQNRNYRKTSKTPRRPFEKERLDQELKLCGEYGLRCKREIWRVQFTLAKIRKAARELLTLDPKDPRRLFEGPALLRRMVRYGLLNEDEKELDFVLQLSTQKILERRLQTKVFKQSLAKSIHHARVLIKQRHIRVGKQLVNVPSFMVRLDAEKHVDL 160
            MP I   RNYRKT KTPRRPFEKERLDQELKLCGEYGLRCKREIWRVQ+ LAKIRKAARELLTLD KDP+RLFEGPALLRRM R+GLL E+EKELDFVLQLSTQK+LERRLQTKVFKQ LAKSIHHARVLI+QRHIRVGKQLVN+PSF VR+D+EKH+D 
Sbjct:    1 MPKIGMYRNYRKTYKTPRRPFEKERLDQELKLCGEYGLRCKREIWRVQYALAKIRKAARELLTLDAKDPKRLFEGPALLRRMARFGLLTEEEKELDFVLQLSTQKLLERRLQTKVFKQGLAKSIHHARVLIRQRHIRVGKQLVNIPSFTVRVDSEKHIDF 160

[Close]

BLAST of mRNA_H-akashiwo_Contig811.14.1 vs. uniprot
Match: W7TRI6_9STRA (40s ribosomal protein s9 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TRI6_9STRA)

HSP 1 Score: 275 bits (703), Expect = 7.960e-90
Identity = 144/180 (80.00%), Postives = 158/180 (87.78%), Query Frame = 0

Query:    1 MPTIAQNRNYRKTSKTPRRPFEKERLDQELKLCGEYGLRCKREIWRVQFTLAKIRKAARELLTLDPKDPRRLFEGPALLRRMVRYGLLNEDEKELDFVLQLSTQKILERRLQTKVFKQSLAKSIHHARVLIKQRHIRVGKQLVNVPSFMVRLDAEKHVDLRSPRPRPGPPGRGPQARRHE 180
            MP+IA  RNYRKT KTPRRPFEKERLDQELKLCGEYGLRCK EIWRVQF LAKIRKAARELLTLD KDPRR+FEGPALLRR VR GLL +D+ ELDFVLQL+TQK+LERRLQTKVFKQSLAKSIHHARVLI+QRHIRVGKQLVN+PSF+VR+D+EKH+D  +  P  G   +G  ARR E
Sbjct:   55 MPSIAFRRNYRKTDKTPRRPFEKERLDQELKLCGEYGLRCKAEIWRVQFALAKIRKAARELLTLDEKDPRRVFEGPALLRRCVRAGLLEQDKAELDFVLQLTTQKLLERRLQTKVFKQSLAKSIHHARVLIRQRHIRVGKQLVNIPSFLVRVDSEKHIDFSTTSPY-GQGRKGRVARRRE 233

[Close]

BLAST of mRNA_H-akashiwo_Contig811.14.1 vs. uniprot
Match: A0A7S2SP92_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SP92_9STRA)

HSP 1 Score: 272 bits (695), Expect = 1.560e-89
Identity = 139/179 (77.65%), Postives = 154/179 (86.03%), Query Frame = 0

Query:    1 MPTIAQNRNYRKTSKTPRRPFEKERLDQELKLCGEYGLRCKREIWRVQFTLAKIRKAARELLTLDPKDPRRLFEGPALLRRMVRYGLLNEDEKELDFVLQLSTQKILERRLQTKVFKQSLAKSIHHARVLIKQRHIRVGKQLVNVPSFMVRLDAEKHVDLRSPRPRPGPPGRGPQARRH 179
            MP+I   RNY KTSKTPRRPFEKERLDQELKLCGEYGLRCKREIWRVQ  LAKIRKAARELLTLDPKD +R+FEGPALLR+M RYGLL ++EKELDFVLQL+TQK+LERRLQT+VFK  LAKSIHHARVLIKQRHI+VGKQLVNVPSF+VR+D+EKH+D     P       G  AR+H
Sbjct:    1 MPSIGGKRNYSKTSKTPRRPFEKERLDQELKLCGEYGLRCKREIWRVQLALAKIRKAARELLTLDPKDAKRVFEGPALLRKMARYGLLTDEEKELDFVLQLTTQKLLERRLQTRVFKSHLAKSIHHARVLIKQRHIKVGKQLVNVPSFLVRVDSEKHIDFAPTSPYSDAGRMGRVARKH 179

[Close]

BLAST of mRNA_H-akashiwo_Contig811.14.1 vs. uniprot
Match: D8LBC1_ECTSI (Uncharacterized protein n=3 Tax=Eukaryota TaxID=2759 RepID=D8LBC1_ECTSI)

HSP 1 Score: 271 bits (694), Expect = 2.450e-89
Identity = 135/160 (84.38%), Postives = 147/160 (91.88%), Query Frame = 0

Query:    1 MPTIAQNRNYRKTSKTPRRPFEKERLDQELKLCGEYGLRCKREIWRVQFTLAKIRKAARELLTLDPKDPRRLFEGPALLRRMVRYGLLNEDEKELDFVLQLSTQKILERRLQTKVFKQSLAKSIHHARVLIKQRHIRVGKQLVNVPSFMVRLDAEKHVDL 160
            MP +  +RNYRKT KTPRRP+EKERLD ELKLCGEYGLRCKREIWRVQF LAKIRKAAR+LLTLD KDP+RLFEGPALLRRM R+GLL EDEKELDFVLQL+T+K+LERRLQTKVFKQ LAKSIHHARVLIK RHIRVGKQLVNVP FMVR+D+EKH+D 
Sbjct:    1 MPKVGIHRNYRKTFKTPRRPYEKERLDSELKLCGEYGLRCKREIWRVQFALAKIRKAARQLLTLDTKDPKRLFEGPALLRRMSRFGLLGEDEKELDFVLQLTTEKMLERRLQTKVFKQGLAKSIHHARVLIKHRHIRVGKQLVNVPQFMVRMDSEKHIDF 160

[Close]

BLAST of mRNA_H-akashiwo_Contig811.14.1 vs. uniprot
Match: A0A7S2BVT2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BVT2_9STRA)

HSP 1 Score: 271 bits (693), Expect = 3.470e-89
Identity = 137/165 (83.03%), Postives = 151/165 (91.52%), Query Frame = 0

Query:    1 MPTIAQNRNYRKTSKTPRRPFEKERLDQELKLCGEYGLRCKREIWRVQFTLAKIRKAARELLTLDPKDPRRLFEGPALLRRMVRYGLLNEDEKELDFVLQLSTQKILERRLQTKVFKQSLAKSIHHARVLIKQRHIRVGKQLVNVPSFMVRLDAEKHVDLRSPRP 165
            MP+IA  RNY  TSKTPRR +EKERLDQELKLCGEYGLRCKREIWRVQ  LAKIRKAAR+LLTLD KDP+RLFEGPALLR+MVRYGLL+E+EKELDFVLQL+TQK+LERRLQTKVFKQ LAKSIHHARVLIKQRHIRVGKQLVNVPSF+VR+D+EKH+   +  P
Sbjct:    1 MPSIAFKRNYSSTSKTPRRAYEKERLDQELKLCGEYGLRCKREIWRVQLALAKIRKAARDLLTLDVKDPKRLFEGPALLRKMVRYGLLSEEEKELDFVLQLTTQKLLERRLQTKVFKQGLAKSIHHARVLIKQRHIRVGKQLVNVPSFLVRVDSEKHIQFATTSP 165

[Close]

BLAST of mRNA_H-akashiwo_Contig811.14.1 vs. uniprot
Match: A0A7S1BHT3_9STRA (Hypothetical protein n=5 Tax=Bacillariophyta TaxID=2836 RepID=A0A7S1BHT3_9STRA)

HSP 1 Score: 270 bits (691), Expect = 6.310e-89
Identity = 142/173 (82.08%), Postives = 152/173 (87.86%), Query Frame = 0

Query:    1 MPTIAQNRNYRKTSKTPRRPFEKERLDQELKLCGEYGLRCKREIWRVQFTLAKIRKAARELLTLDPKDPRRLFEGPALLRRMVRYGLLNEDEKELDFVLQLSTQKILERRLQTKVFKQSLAKSIHHARVLIKQRHIRVGKQLVNVPSFMVRLDAEKHVDLRSPRPR-PGPPGR 172
            MPT A +RNYRKTSKTPRRP+EKERLD ELKL GEYGLRCKRE+WRVQF LAK+RKAAR LLTLDPKDP+R+FEG ALLRRM RYGLLNEDE ELDFVLQLSTQKILERRLQTKVFKQ LAKSIHHARVLI+QRHIRVG QLVNVPSF VR  +EKH+D  +  P   GPPGR
Sbjct:    1 MPTNAMHRNYRKTSKTPRRPYEKERLDAELKLVGEYGLRCKREVWRVQFALAKLRKAARTLLTLDPKDPKRVFEGEALLRRMSRYGLLNEDELELDFVLQLSTQKILERRLQTKVFKQGLAKSIHHARVLIRQRHIRVGGQLVNVPSFNVRTSSEKHMDFATNSPYGQGPPGR 173

[Close]

BLAST of mRNA_H-akashiwo_Contig811.14.1 vs. uniprot
Match: A0A3R6WW56_9STRA (Ribosomal_S4 domain-containing protein n=6 Tax=Saprolegniaceae TaxID=4764 RepID=A0A3R6WW56_9STRA)

HSP 1 Score: 265 bits (677), Expect = 1.000e-86
Identity = 130/160 (81.25%), Postives = 149/160 (93.12%), Query Frame = 0

Query:    1 MPTIAQNRNYRKTSKTPRRPFEKERLDQELKLCGEYGLRCKREIWRVQFTLAKIRKAARELLTLDPKDPRRLFEGPALLRRMVRYGLLNEDEKELDFVLQLSTQKILERRLQTKVFKQSLAKSIHHARVLIKQRHIRVGKQLVNVPSFMVRLDAEKHVDL 160
            MP I+++RNYRKT +TP R FEKERLDQE+KL GEYGLRCKREIWRVQ+TLAK+RKAAR+LLTLDPKDP+RLFEGPAL+RR+ RYGLL +DE ELDFVLQ++TQK+LERRLQTKVFKQ LAKSIHHAR LIKQRHIRVG+QLV+VPSFMVRLD+EKH+D 
Sbjct:    1 MPKISRHRNYRKTYRTPSRAFEKERLDQEMKLLGEYGLRCKREIWRVQYTLAKLRKAARQLLTLDPKDPKRLFEGPALMRRLKRYGLLADDENELDFVLQMNTQKLLERRLQTKVFKQGLAKSIHHARTLIKQRHIRVGRQLVDVPSFMVRLDSEKHIDF 160

[Close]

BLAST of mRNA_H-akashiwo_Contig811.14.1 vs. uniprot
Match: A0A7S0TCI6_9STRA (Hypothetical protein n=2 Tax=Pelagophyceae TaxID=35675 RepID=A0A7S0TCI6_9STRA)

HSP 1 Score: 265 bits (677), Expect = 1.000e-86
Identity = 132/160 (82.50%), Postives = 146/160 (91.25%), Query Frame = 0

Query:    1 MPTIAQNRNYRKTSKTPRRPFEKERLDQELKLCGEYGLRCKREIWRVQFTLAKIRKAARELLTLDPKDPRRLFEGPALLRRMVRYGLLNEDEKELDFVLQLSTQKILERRLQTKVFKQSLAKSIHHARVLIKQRHIRVGKQLVNVPSFMVRLDAEKHVDL 160
            MP +   RNY KTSKTPRRPFEKER+D ELKLCGEYGLRCKRE+WRVQF LAKIRKAARELLTLDPKDP+RLFEG ALLRRM RYGLL+E E +LD +LQ++TQK+LERRLQTKVFKQ LAKSIHHARVLIKQRHIRVGKQ+VNVPSFMVR+D+EKH+D 
Sbjct:    1 MPKVRFLRNYSKTSKTPRRPFEKERIDGELKLCGEYGLRCKRELWRVQFALAKIRKAARELLTLDPKDPKRLFEGAALLRRMARYGLLDETELDLDAILQMTTQKLLERRLQTKVFKQGLAKSIHHARVLIKQRHIRVGKQVVNVPSFMVRVDSEKHIDF 160

[Close]

BLAST of mRNA_H-akashiwo_Contig811.14.1 vs. uniprot
Match: A0A6G0XI73_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XI73_9STRA)

HSP 1 Score: 266 bits (680), Expect = 1.100e-86
Identity = 131/160 (81.88%), Postives = 150/160 (93.75%), Query Frame = 0

Query:    1 MPTIAQNRNYRKTSKTPRRPFEKERLDQELKLCGEYGLRCKREIWRVQFTLAKIRKAARELLTLDPKDPRRLFEGPALLRRMVRYGLLNEDEKELDFVLQLSTQKILERRLQTKVFKQSLAKSIHHARVLIKQRHIRVGKQLVNVPSFMVRLDAEKHVDL 160
            MP I+++RNYRKT +TP R FEKERLDQE+KL GEYGLRCKREIWRVQ+TLAK+RKAAR+LLTLDPKDP+RLFEGPAL+RR+ R+GLL EDE ELDFVLQ++TQK+LERRLQTKVFKQ LAKSIHHARVLIKQRHIRVG+QLV+VPSFMVRLD+EKH+D 
Sbjct:    1 MPKISRHRNYRKTYRTPSRAFEKERLDQEMKLLGEYGLRCKREIWRVQYTLAKLRKAARQLLTLDPKDPKRLFEGPALMRRLKRFGLLAEDENELDFVLQMNTQKLLERRLQTKVFKQGLAKSIHHARVLIKQRHIRVGRQLVDVPSFMVRLDSEKHIDF 160

The following BLAST results are available for this feature:

BLAST of mRNA_H-akashiwo_Contig811.14.1 vs. uniprot

BLAST of mRNA_H-akashiwo_Contig811.14.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A7S2V9P4_9STRA	3.880e-93	88.13	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A836CIZ7_9STRA	3.550e-91	86.25	Uncharacterized protein n=2 Tax=Tribonema minus Ta...	[more]
W7TRI6_9STRA	7.960e-90	80.00	40s ribosomal protein s9 n=3 Tax=Monodopsidaceae T...	[more]
A0A7S2SP92_9STRA	1.560e-89	77.65	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
D8LBC1_ECTSI	2.450e-89	84.38	Uncharacterized protein n=3 Tax=Eukaryota TaxID=27...	[more]
A0A7S2BVT2_9STRA	3.470e-89	83.03	Hypothetical protein n=1 Tax=Florenciella parvula ...	[more]
A0A7S1BHT3_9STRA	6.310e-89	82.08	Hypothetical protein n=5 Tax=Bacillariophyta TaxID...	[more]
A0A3R6WW56_9STRA	1.000e-86	81.25	Ribosomal_S4 domain-containing protein n=6 Tax=Sap...	[more]
A0A7S0TCI6_9STRA	1.000e-86	82.50	Hypothetical protein n=2 Tax=Pelagophyceae TaxID=3...	[more]
A0A6G0XI73_9STRA	1.100e-86	81.88	Uncharacterized protein n=1 Tax=Aphanomyces euteic...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001912	Ribosomal protein S4/S9, N-terminal	SMART	SM01390	Ribosomal_S4_2	coord: 8..108 e-value: 8.0E-21 score: 85.2
IPR001912	Ribosomal protein S4/S9, N-terminal	PFAM	PF00163	Ribosomal_S4	coord: 15..64 e-value: 1.1E-5 score: 26.3
IPR002942	RNA-binding S4 domain	PFAM	PF01479	S4	coord: 109..152 e-value: 4.7E-9 score: 35.8
IPR002942	RNA-binding S4 domain	CDD	cd00165	S4	coord: 109..151 e-value: 8.3713E-7 score: 43.3922
IPR005710	Ribosomal protein S4/S9, eukaryotic/archaeal	TIGRFAM	TIGR01018	TIGR01018	coord: 7..162 e-value: 2.1E-58 score: 194.8
IPR036986	RNA-binding S4 domain superfamily	GENE3D	3.10.290.10		coord: 108..166 e-value: 7.7E-12 score: 47.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR11831:SF5	40S RIBOSOMAL PROTEIN S9	coord: 13..172
None	No IPR available	PROSITE	PS50889	S4	coord: 109..151 score: 9.545935
None	No IPR available	SUPERFAMILY	55174	Alpha-L RNA-binding motif	coord: 13..161
IPR022801	Ribosomal protein S4/S9	PANTHER	PTHR11831	30S 40S RIBOSOMAL PROTEIN	coord: 13..172
IPR018079	Ribosomal protein S4, conserved site	PROSITE	PS00632	RIBOSOMAL_S4	coord: 107..131

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-akashiwo_Contig811	contig	H-akashiwo_Contig811:432872..445277 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Heterosigma akashiwo CCMP452 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-akashiwo_Contig811.14.1	mRNA_H-akashiwo_Contig811.14.1	Heterosigma akashiwo CCMP452	mRNA	H-akashiwo_Contig811 432865..445554 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-akashiwo_Contig811.14.1 ID=prot_H-akashiwo_Contig811.14.1|Name=mRNA_H-akashiwo_Contig811.14.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=258bp
MPTIAQNRNYRKTSKTPRRPFEKERLDQELKLCGEYGLRCKREIWRVQFT
LAKIRKAARELLTLDPKDPRRLFEGPALLRRMVRYGLLNEDEKELDFVLQ
LSTQKILERRLQTKVFKQSLAKSIHHARVLIKQRHIRVGKQLVNVPSFMV
RLDAEKHVDLRSPRPRPGPPGRGPQARRHEGCLWWWRRGGGLNPFPLPHG
CPAMRLCPTSLNNNEGGTDNDGSAARPLLQIGAMGGIWHFFSNESIKSLH
SEQVLFS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001912	Ribosomal_S4/S9_N
IPR002942	S4_RNA-bd
IPR005710	Ribosomal_S4/S9_euk/arc
IPR036986	S4_RNA-bd_sf
IPR022801	Ribosomal_S4/S9
IPR018079	Ribosomal_S4_CS