prot_H-akashiwo_Contig1249.16.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig1249.16.1
Unique Nameprot_H-akashiwo_Contig1249.16.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length189
Homology
BLAST of mRNA_H-akashiwo_Contig1249.16.1 vs. uniprot
Match: A0A6H5JXT6_9PHAE (RING-type E3 ubiquitin transferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXT6_9PHAE)

HSP 1 Score: 171 bits (434), Expect = 1.550e-50
Identity = 103/214 (48.13%), Postives = 128/214 (59.81%), Query Frame = 0
Query:    1 ECNVCLGGLVDPVVTRCGHL---PCLYRWLSSNHRDCPVCKAGVTVDNIIPLYCRGADAVDPRT-KTQPGGGGGEGGHIPSRPAAERPEVPQVRCPEMVYEGQRVRGXXXXXXXGFERQPATIRNTGGVTFSAGFGFFPSLFGLQFQSFNT-AQPQQNNEGE---------------------GRYASEERQQAFLSRLLLMLGSFIILCLLLF 188
            ECN+CL G+ +PVVTRCGHL   PCLYRWL++N  +CPVCKAGVT  N++P+Y RGA+ VDPRT +T+  G       +PSRP AERP+  ++R       G  V G       G +     +   G V F AG GFFPSLFGLQFQSF + A+P     G+                     G  A EE QQAFLSRLLL+LGSF++LCL+LF
Sbjct:   23 ECNICLDGVREPVVTRCGHLFCWPCLYRWLNTNQTECPVCKAGVTASNVVPIYGRGAEGVDPRTIRTERNG-------VPSRPEAERPQAARLRHANAFTGGFDVGGGGGAGATGVDGVGNGVAG-GHVHFQAGLGFFPSLFGLQFQSFTSPARPASARAGDDEVAEIVDGSAAVQVNRGPSRGAGAVEEAQQAFLSRLLLVLGSFVVLCLVLF 228          
BLAST of mRNA_H-akashiwo_Contig1249.16.1 vs. uniprot
Match: A0A7S2V596_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V596_9STRA)

HSP 1 Score: 171 bits (434), Expect = 5.200e-50
Identity = 104/197 (52.79%), Postives = 122/197 (61.93%), Query Frame = 0
Query:    1 ECNVCLGGLVDPVVTRCGHL---PCLYRWLSSNHRDCPVCKAGVTVDNIIPLYCRGADAVDPRTKTQPGGGGGEGGHIPSRPAAERPEV--PQ----VRCPEMVYEGQRVRGXXXXXXXGFERQPATIRNTGGVTFSAGFGFFPSLFGLQFQSFNTAQPQQNNEGEGRYASEERQQAFLSRLLLMLGSFIILCLLLF 188
            ECN+CL  + +PVVTRCGHL    CLYRWL+ N  DCPVCKAGV+ DN+IP+Y RGA+  DPRTK +      EG HIP RPA +RPE   PQ    +  P     GQ                       G V FSAGFGFFPSLFGLQFQ+F+T  PQ+NN G      EE QQAFLS++LL LGS +ILCLL+F
Sbjct:  104 ECNICLDLVHEPVVTRCGHLFCWSCLYRWLNVNRTDCPVCKAGVSQDNVIPIYTRGAEEQDPRTKPRHS----EGEHIPQRPAGQRPEPRPPQNNNNINDPNQGMAGQ----------------------FGNVQFSAGFGFFPSLFGLQFQTFST--PQRNNNGV--MTPEEIQQAFLSKVLLGLGSLVILCLLMF 270          
BLAST of mRNA_H-akashiwo_Contig1249.16.1 vs. uniprot
Match: W7TVM5_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TVM5_9STRA)

HSP 1 Score: 155 bits (391), Expect = 1.100e-42
Identity = 99/202 (49.01%), Postives = 116/202 (57.43%), Query Frame = 0
Query:    1 ECNVCLGGLVDPVVTRCGHL---PCLYRWLSSNHRDCPVCKAGVTVDNIIPLYCRGADAVDPRTKTQPGGGGG--EGGHIPSRPAAERPEVPQVRCPEMVYEGQRVRGXXXXXXXGFERQ--PATIRNTG------GVTFSAGFGFFPSLFGLQFQSFNTAQPQQ---------NNEGEGRYASEERQQAFLSRLLLMLGSF 180
            +CNVCL  + DPVVT CGHL   PCLYRWLS+NH  CPVCKAGVT +N+IPLY RG++ VDPRTKT+ GG  G  E   +P RPAA+RPE  +      +       G       G        TI   G       V+FSAG GFFPSLFGLQFQ+F  +             N  G G  A +E QQAFLS+LLL LG F
Sbjct:  102 DCNVCLSEVGDPVVTLCGHLYCWPCLYRWLSTNH-TCPVCKAGVTKENVIPLYGRGSEQVDPRTKTRRGGAIGREEATDVPGRPAAQRPEA-RPEADSFIGGASAFVGGIPFNSFGAAHHYTGGTIGGLGPPGRNSAVSFSAGLGFFPSLFGLQFQTFTPSSSSSVAATQGVGFNGSGNGSTA-DEAQQAFLSKLLLTLGIF 300          
BLAST of mRNA_H-akashiwo_Contig1249.16.1 vs. uniprot
Match: A0A835ZFB6_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFB6_9STRA)

HSP 1 Score: 150 bits (378), Expect = 1.400e-42
Identity = 96/191 (50.26%), Postives = 116/191 (60.73%), Query Frame = 0
Query:    1 ECNVCLGGLVDPVVTRCGHL---PCLYRWLSSNHRDCPVCKAGVTVDNIIPLYCRGADAVDPRTKTQPGGGGGEGGHIPSRPAAERPEVPQVRCPEMVYEGQRVRGXXXXXXXGFERQPATIRNTGGVTFSAGFGFFPSLFGLQFQSFNTAQPQQNNEGEGRYASEERQQAFLSRLLLMLGSFIILCLLLF 188
            ECN+CL  + +PVVTRCGHL   PCLYRWL++NH +CPVCKAGV+ DN+IPLY RG D VDPRTKT          +IP RP A            +  EG     XXXXX   F +        GG+T +AGFGFFPSLF LQFQ F +A        +   A+   QQA LSR+LL LG+F++ CLLLF
Sbjct:   16 ECNICLDHVNEPVVTRCGHLFCWPCLYRWLNTNHTECPVCKAGVSCDNVIPLYGRGQDPVDPRTKTVDR----SAENIPERPTAXXXXX--XXXXGVFGEGFXXXXXXXXXANEFAQ--------GGMTITAGFGFFPSLFALQFQRFTSAPAGAQAPADSEDAA---QQAMLSRILLALGTFVVACLLLF 189          
BLAST of mRNA_H-akashiwo_Contig1249.16.1 vs. uniprot
Match: A0A7S3HD97_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HD97_9STRA)

HSP 1 Score: 144 bits (363), Expect = 4.320e-40
Identity = 90/193 (46.63%), Postives = 114/193 (59.07%), Query Frame = 0
Query:    2 CNVCLGGLVD--PVVTRCGHL---PCLYRWLSSNHRDCPVCKAGVTVDNIIPLYCRGADAVDPRTKTQPGGGGGEGGHIPSRPAAERPEVPQVRCPEMVYEGQRVRGXXXXXXXGFERQPATIR-NTGGVTFSAGFGFFPSLFGLQFQSFNTAQPQQNNEGEGRYASEERQQAFLSRLLLMLGSFIILCLLLF 188
            CNVCL  + D  PVVT+CGHL   PCLYRWL+++H  CPVCKAGV+ +N+IP++ RG+   DPR KT          +IP+RP   RP+            GQ                P  I  N GG++FSAGFGFFPSLFGLQFQSF    P       G  A E+ QQA+LSR+L+ LG+ ++LCL+LF
Sbjct:   48 CNVCLEPVKDKDPVVTQCGHLYCWPCLYRWLNTHHSTCPVCKAGVSQENVIPIFIRGS-VEDPRLKTS------NQDNIPNRPLGHRPDPIHNDT-----HGQ---------------SPINIGYNFGGISFSAGFGFFPSLFGLQFQSFAPPAP------NGTQAEEDAQQAYLSRVLMFLGAAVVLCLVLF 207          
BLAST of mRNA_H-akashiwo_Contig1249.16.1 vs. uniprot
Match: D7FV06_ECTSI (RING-type E3 ubiquitin transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV06_ECTSI)

HSP 1 Score: 142 bits (359), Expect = 4.500e-40
Identity = 77/147 (52.38%), Postives = 91/147 (61.90%), Query Frame = 0
Query:    1 ECNVCLGGLVDPVVTRCGHL---PCLYRWLSSNHRDCPVCKAGVTVDNIIPLYCRGADAVDPRTKTQPGGGGGEGGHIPSRPAAERPEVPQVRCPEMVYEGQRVRGXXXXXXXGFERQPATIRNTGGVTFSAGFGFFPSLFGLQFQS 144
            ECN+CL G+ +PVVTRCGHL   PCLYRWL++N  +CPVCKAGVT  N+IPLY RGA++VDPRTK     G      +PSRP AERP+  ++R       G  V G       G +         G V F AG GFFPSLFGLQF S
Sbjct:   16 ECNICLDGVREPVVTRCGHLFCWPCLYRWLNTNQTECPVCKAGVTASNVIPLYGRGAESVDPRTKPTERDG------VPSRPEAERPQAARLRHANAFTGGFDVGGGGGAGPTGEDGVGNGAVAGGHVHFQAGLGFFPSLFGLQFVS 156          
BLAST of mRNA_H-akashiwo_Contig1249.16.1 vs. uniprot
Match: A0A1Y1IV45_KLENI (RING-type E3 ubiquitin transferase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IV45_KLENI)

HSP 1 Score: 143 bits (361), Expect = 2.830e-39
Identity = 96/205 (46.83%), Postives = 114/205 (55.61%), Query Frame = 0
Query:    1 ECNVCLGGLVDPVVTRCGHL---PCLYRWLS--SNHRDCPVCKAGVTVDNIIPLYCRGADAVDPRTKTQPGGGGGEGGHIPSRPAAERPEVPQVRCPEMVYEGQRVRGXXXXXXXGFERQPATIRNTGGVTFSAGFGFFPSLFGLQFQSFNTAQPQQN-----NEGEG-------RYASEERQQAFLSRLLLMLGSFIILCLLLF 188
            ECN+CL    DPVVT CGHL   PCLYRWL   S  ++CPVCKAGV+  N+IPLY RG    DPRTK         G  IP RPA +RPE    R P+M                GF   P+     G  T SAGFG FPSL GLQ+Q++ T  P        ++G G           E++QQAFLSRLL+MLGSF++LCLL F
Sbjct:   70 ECNICLELAQDPVVTLCGHLFCWPCLYRWLRLHSQCKECPVCKAGVSEKNVIPLYGRGTSGEDPRTKPV------SGPEIPRRPAGQRPE--SQRAPQM-------------GPFGFMAGPSA--QFGNFTLSAGFGLFPSLLGLQWQAY-TGDPMPAGFAAPDDGTGVAPVPRAALTPEQQQQAFLSRLLVMLGSFVLLCLLFF 250          
BLAST of mRNA_H-akashiwo_Contig1249.16.1 vs. uniprot
Match: A0A6A3U665_9STRA (RING-type E3 ubiquitin transferase n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3U665_9STRA)

HSP 1 Score: 136 bits (342), Expect = 3.770e-37
Identity = 85/198 (42.93%), Postives = 111/198 (56.06%), Query Frame = 0
Query:    1 ECNVCLGGLVDPVVTRCGHL---PCLYRWLSSNHRDCPVCKAGVTVDNIIPLYCRGADAVDPRTKTQPGGGGGEGGHIPSRPAAERPEVPQVRCPEMVYEGQRVRGXXXXXXXGFERQPATI----RNTGGVTFSAGFGFFPSLFGLQFQSFNTAQPQQNNEGEGRYASEERQQ---AFLSRLLLMLGSFIILCLLLF 188
            ECNVCL  +  PVVT CGHL   PCLY+W+  NH +CPVCKAG++ +N+IP+Y RGA+AVDPRT+ Q    G     IP RP  +RP+  Q+R                       R+P +     RN  G   S   GFFP+LFG+ +Q    A    + +G    A E RQQ   AFLSR LL++GS ++LCL+ F
Sbjct:   22 ECNVCLDTVSSPVVTLCGHLYCWPCLYQWMR-NHSECPVCKAGISEENVIPVYARGAEAVDPRTQQQMSDNG-----IPHRPRGQRPDAEQLR----------------------RRRPFSFGLFNRNGNGNPMSPTIGFFPALFGVPYQP--PAPVTHHPDGSPLTAQEARQQVQQAFLSRFLLVVGSLVVLCLITF 189          
BLAST of mRNA_H-akashiwo_Contig1249.16.1 vs. uniprot
Match: A0A1V9Z912_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z912_9STRA)

HSP 1 Score: 130 bits (326), Expect = 6.870e-35
Identity = 85/197 (43.15%), Postives = 116/197 (58.88%), Query Frame = 0
Query:    1 ECNVCLGGLVDPVVTRCGHL---PCLYRWLSSNHRDCPVCKAGVTVDNIIPLYCRGADAVDPRTKTQPGGGGGEGGHIPSRPAAERPEVPQVRCPEMVYEGQRVRGXXXXXXXGFERQPATIRNTGG--VTFSAGFGFFPSLFGLQFQSFNTA-QPQQNNEGEGRYASEERQQ---AFLSRLLLMLGSFIILCLLLF 188
            +CN+C+  + +PVVT CGHL   PCL++W++ NH DCPVCKAGVT +N+IP+Y RGA++VDPRT     G       IP+RP  +RPE P +R   +                   ++P  +    G    FS   GFFPSLFGLQFQS  TA  P  N +     A+E +QQ   AFLS++LL +G+ ++L L+LF
Sbjct:    9 DCNICIDRVKEPVVTLCGHLYCWPCLFQWIA-NHNDCPVCKAGVTSENVIPVYGRGANSVDPRTVKGTDG-------IPNRPRGQRPE-PSLRRRHV-------------------QEPEALVGPPGQEAAFSPLIGFFPSLFGLQFQSAATAGMPTGNLQASPLTAAELQQQVQFAFLSKMLLFVGTAVMLGLILF 177          
BLAST of mRNA_H-akashiwo_Contig1249.16.1 vs. uniprot
Match: W2QFK5_PHYPN (RING-type E3 ubiquitin transferase n=8 Tax=Phytophthora TaxID=4783 RepID=W2QFK5_PHYPN)

HSP 1 Score: 130 bits (327), Expect = 7.220e-35
Identity = 83/198 (41.92%), Postives = 107/198 (54.04%), Query Frame = 0
Query:    1 ECNVCLGGLVDPVVTRCGHL---PCLYRWLSSNHRDCPVCKAGVTVDNIIPLYCRGADAVDPRTKTQPGGGGGEGGHIPSRPAAERPEVPQVRCPEMVYEGQRVRGXXXXXXXGFERQPATIR----NTGGVTFSAG--FGFFPSLFGLQFQSFNTAQPQQNNEG-EGRYASEERQQAFLSRLLLMLGSFIILCLLLF 188
            ECN+CL  +  PVVT CGHL   PCLY+W+  NH +CPVCKAGV+  N+IP+Y RGADA DPRT+     G      IP RP  +RP+  Q+R                       R+P        N  G  FS     GFFP+LFG+ +Q    A   Q+      + A ++ QQAFLSR LL++GS +ILCL+ F
Sbjct:   23 ECNICLDTVSSPVVTLCGHLYCWPCLYQWMQ-NHSECPVCKAGVSEQNVIPVYARGADATDPRTQQVSDSG------IPHRPRGQRPDAEQLR----------------------RRRPYNFGIFNGNGQGNAFSMSPTIGFFPALFGVPYQPPAAAMHHQDGTPLTAQEARQQMQQAFLSRFLLIVGSLVILCLITF 191          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1249.16.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JXT6_9PHAE1.550e-5048.13RING-type E3 ubiquitin transferase n=1 Tax=Ectocar... [more]
A0A7S2V596_9STRA5.200e-5052.79RING-type E3 ubiquitin transferase n=1 Tax=Fibroca... [more]
W7TVM5_9STRA1.100e-4249.01RING-type E3 ubiquitin transferase n=1 Tax=Nannoch... [more]
A0A835ZFB6_9STRA1.400e-4250.26RING-type E3 ubiquitin transferase n=1 Tax=Tribone... [more]
A0A7S3HD97_9STRA4.320e-4046.63RING-type E3 ubiquitin transferase n=1 Tax=Spumell... [more]
D7FV06_ECTSI4.500e-4052.38RING-type E3 ubiquitin transferase n=1 Tax=Ectocar... [more]
A0A1Y1IV45_KLENI2.830e-3946.83RING-type E3 ubiquitin transferase n=1 Tax=Klebsor... [more]
A0A6A3U665_9STRA3.770e-3742.93RING-type E3 ubiquitin transferase n=2 Tax=Phytoph... [more]
A0A1V9Z912_9STRA6.870e-3543.15RING-type E3 ubiquitin transferase n=1 Tax=Achlya ... [more]
W2QFK5_PHYPN7.220e-3541.92RING-type E3 ubiquitin transferase n=8 Tax=Phytoph... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 1..52
e-value: 4.8E-11
score: 43.9
IPR018957Zinc finger, C3HC4 RING-typePFAMPF00097zf-C3HC4coord: 2..37
e-value: 4.7E-5
score: 23.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 60..86
NoneNo IPR availablePANTHERPTHR12313:SF47RING ZINC FINGER PROTEIN-RELATEDcoord: 1..186
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 1..51
IPR045103E3 ubiquitin-protein ligase RNF5/RNF185-likePANTHERPTHR12313E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATEDcoord: 1..186
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 2..38
score: 8.874793

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1249contigH-akashiwo_Contig1249:132562..147721 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1249.16.1mRNA_H-akashiwo_Contig1249.16.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig1249 132562..147721 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig1249.16.1 ID=prot_H-akashiwo_Contig1249.16.1|Name=mRNA_H-akashiwo_Contig1249.16.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=189bp
ECNVCLGGLVDPVVTRCGHLPCLYRWLSSNHRDCPVCKAGVTVDNIIPLY
CRGADAVDPRTKTQPGGGGGEGGHIPSRPAAERPEVPQVRCPEMVYEGQR
VRGGGGGGEGGFERQPATIRNTGGVTFSAGFGFFPSLFGLQFQSFNTAQP
QQNNEGEGRYASEERQQAFLSRLLLMLGSFIILCLLLF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR018957Znf_C3HC4_RING-type
IPR045103RNF5/RNF185-like
IPR001841Znf_RING