mRNA_H-akashiwo_Contig1249.16.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig1249.16.1
Unique NamemRNA_H-akashiwo_Contig1249.16.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig1249.16.1 vs. uniprot
Match: A0A6H5JXT6_9PHAE (RING-type E3 ubiquitin transferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXT6_9PHAE)

HSP 1 Score: 171 bits (434), Expect = 1.550e-50
Identity = 103/214 (48.13%), Postives = 128/214 (59.81%), Query Frame = 1
Query:    1 ECNVCLGGLVDPVVTRCGHL---PCLYRWLSSNHRDCPVCKAGVTVDNIIPLYCRGADAVDPRT-KTQPGGGGGEGGHIPSRPAAERPEVPQVRCPEMVYEGQRVRGXXXXXXXGFERQPATIRNTGGVTFSAGFGFFPSLFGLQFQSFNT-AQPQQNNEGE---------------------GRYASEERQQAFLSRLLLMLGSFIILCLLLF 564
            ECN+CL G+ +PVVTRCGHL   PCLYRWL++N  +CPVCKAGVT  N++P+Y RGA+ VDPRT +T+  G       +PSRP AERP+  ++R       G  V G       G +     +   G V F AG GFFPSLFGLQFQSF + A+P     G+                     G  A EE QQAFLSRLLL+LGSF++LCL+LF
Sbjct:   23 ECNICLDGVREPVVTRCGHLFCWPCLYRWLNTNQTECPVCKAGVTASNVVPIYGRGAEGVDPRTIRTERNG-------VPSRPEAERPQAARLRHANAFTGGFDVGGGGGAGATGVDGVGNGVAG-GHVHFQAGLGFFPSLFGLQFQSFTSPARPASARAGDDEVAEIVDGSAAVQVNRGPSRGAGAVEEAQQAFLSRLLLVLGSFVVLCLVLF 228          
BLAST of mRNA_H-akashiwo_Contig1249.16.1 vs. uniprot
Match: A0A7S2V596_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V596_9STRA)

HSP 1 Score: 171 bits (434), Expect = 5.200e-50
Identity = 104/197 (52.79%), Postives = 122/197 (61.93%), Query Frame = 1
Query:    1 ECNVCLGGLVDPVVTRCGHL---PCLYRWLSSNHRDCPVCKAGVTVDNIIPLYCRGADAVDPRTKTQPGGGGGEGGHIPSRPAAERPEV--PQ----VRCPEMVYEGQRVRGXXXXXXXGFERQPATIRNTGGVTFSAGFGFFPSLFGLQFQSFNTAQPQQNNEGEGRYASEERQQAFLSRLLLMLGSFIILCLLLF 564
            ECN+CL  + +PVVTRCGHL    CLYRWL+ N  DCPVCKAGV+ DN+IP+Y RGA+  DPRTK +      EG HIP RPA +RPE   PQ    +  P     GQ                       G V FSAGFGFFPSLFGLQFQ+F+T  PQ+NN G      EE QQAFLS++LL LGS +ILCLL+F
Sbjct:  104 ECNICLDLVHEPVVTRCGHLFCWSCLYRWLNVNRTDCPVCKAGVSQDNVIPIYTRGAEEQDPRTKPRHS----EGEHIPQRPAGQRPEPRPPQNNNNINDPNQGMAGQ----------------------FGNVQFSAGFGFFPSLFGLQFQTFST--PQRNNNGV--MTPEEIQQAFLSKVLLGLGSLVILCLLMF 270          
BLAST of mRNA_H-akashiwo_Contig1249.16.1 vs. uniprot
Match: W7TVM5_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TVM5_9STRA)

HSP 1 Score: 155 bits (391), Expect = 1.100e-42
Identity = 99/202 (49.01%), Postives = 116/202 (57.43%), Query Frame = 1
Query:    1 ECNVCLGGLVDPVVTRCGHL---PCLYRWLSSNHRDCPVCKAGVTVDNIIPLYCRGADAVDPRTKTQPGGGGG--EGGHIPSRPAAERPEVPQVRCPEMVYEGQRVRGXXXXXXXGFERQ--PATIRNTG------GVTFSAGFGFFPSLFGLQFQSFNTAQPQQ---------NNEGEGRYASEERQQAFLSRLLLMLGSF 540
            +CNVCL  + DPVVT CGHL   PCLYRWLS+NH  CPVCKAGVT +N+IPLY RG++ VDPRTKT+ GG  G  E   +P RPAA+RPE  +      +       G       G        TI   G       V+FSAG GFFPSLFGLQFQ+F  +             N  G G  A +E QQAFLS+LLL LG F
Sbjct:  102 DCNVCLSEVGDPVVTLCGHLYCWPCLYRWLSTNH-TCPVCKAGVTKENVIPLYGRGSEQVDPRTKTRRGGAIGREEATDVPGRPAAQRPEA-RPEADSFIGGASAFVGGIPFNSFGAAHHYTGGTIGGLGPPGRNSAVSFSAGLGFFPSLFGLQFQTFTPSSSSSVAATQGVGFNGSGNGSTA-DEAQQAFLSKLLLTLGIF 300          
BLAST of mRNA_H-akashiwo_Contig1249.16.1 vs. uniprot
Match: A0A835ZFB6_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFB6_9STRA)

HSP 1 Score: 150 bits (378), Expect = 1.400e-42
Identity = 96/191 (50.26%), Postives = 116/191 (60.73%), Query Frame = 1
Query:    1 ECNVCLGGLVDPVVTRCGHL---PCLYRWLSSNHRDCPVCKAGVTVDNIIPLYCRGADAVDPRTKTQPGGGGGEGGHIPSRPAAERPEVPQVRCPEMVYEGQRVRGXXXXXXXGFERQPATIRNTGGVTFSAGFGFFPSLFGLQFQSFNTAQPQQNNEGEGRYASEERQQAFLSRLLLMLGSFIILCLLLF 564
            ECN+CL  + +PVVTRCGHL   PCLYRWL++NH +CPVCKAGV+ DN+IPLY RG D VDPRTKT          +IP RP A            +  EG     XXXXX   F +        GG+T +AGFGFFPSLF LQFQ F +A        +   A+   QQA LSR+LL LG+F++ CLLLF
Sbjct:   16 ECNICLDHVNEPVVTRCGHLFCWPCLYRWLNTNHTECPVCKAGVSCDNVIPLYGRGQDPVDPRTKTVDR----SAENIPERPTAXXXXX--XXXXGVFGEGFXXXXXXXXXANEFAQ--------GGMTITAGFGFFPSLFALQFQRFTSAPAGAQAPADSEDAA---QQAMLSRILLALGTFVVACLLLF 189          
BLAST of mRNA_H-akashiwo_Contig1249.16.1 vs. uniprot
Match: A0A7S3HD97_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HD97_9STRA)

HSP 1 Score: 144 bits (363), Expect = 4.320e-40
Identity = 90/193 (46.63%), Postives = 114/193 (59.07%), Query Frame = 1
Query:    4 CNVCLGGLVD--PVVTRCGHL---PCLYRWLSSNHRDCPVCKAGVTVDNIIPLYCRGADAVDPRTKTQPGGGGGEGGHIPSRPAAERPEVPQVRCPEMVYEGQRVRGXXXXXXXGFERQPATIR-NTGGVTFSAGFGFFPSLFGLQFQSFNTAQPQQNNEGEGRYASEERQQAFLSRLLLMLGSFIILCLLLF 564
            CNVCL  + D  PVVT+CGHL   PCLYRWL+++H  CPVCKAGV+ +N+IP++ RG+   DPR KT          +IP+RP   RP+            GQ                P  I  N GG++FSAGFGFFPSLFGLQFQSF    P       G  A E+ QQA+LSR+L+ LG+ ++LCL+LF
Sbjct:   48 CNVCLEPVKDKDPVVTQCGHLYCWPCLYRWLNTHHSTCPVCKAGVSQENVIPIFIRGS-VEDPRLKTS------NQDNIPNRPLGHRPDPIHNDT-----HGQ---------------SPINIGYNFGGISFSAGFGFFPSLFGLQFQSFAPPAP------NGTQAEEDAQQAYLSRVLMFLGAAVVLCLVLF 207          
BLAST of mRNA_H-akashiwo_Contig1249.16.1 vs. uniprot
Match: D7FV06_ECTSI (RING-type E3 ubiquitin transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV06_ECTSI)

HSP 1 Score: 142 bits (359), Expect = 4.500e-40
Identity = 77/147 (52.38%), Postives = 91/147 (61.90%), Query Frame = 1
Query:    1 ECNVCLGGLVDPVVTRCGHL---PCLYRWLSSNHRDCPVCKAGVTVDNIIPLYCRGADAVDPRTKTQPGGGGGEGGHIPSRPAAERPEVPQVRCPEMVYEGQRVRGXXXXXXXGFERQPATIRNTGGVTFSAGFGFFPSLFGLQFQS 432
            ECN+CL G+ +PVVTRCGHL   PCLYRWL++N  +CPVCKAGVT  N+IPLY RGA++VDPRTK     G      +PSRP AERP+  ++R       G  V G       G +         G V F AG GFFPSLFGLQF S
Sbjct:   16 ECNICLDGVREPVVTRCGHLFCWPCLYRWLNTNQTECPVCKAGVTASNVIPLYGRGAESVDPRTKPTERDG------VPSRPEAERPQAARLRHANAFTGGFDVGGGGGAGPTGEDGVGNGAVAGGHVHFQAGLGFFPSLFGLQFVS 156          
BLAST of mRNA_H-akashiwo_Contig1249.16.1 vs. uniprot
Match: A0A1Y1IV45_KLENI (RING-type E3 ubiquitin transferase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IV45_KLENI)

HSP 1 Score: 143 bits (361), Expect = 2.830e-39
Identity = 96/205 (46.83%), Postives = 114/205 (55.61%), Query Frame = 1
Query:    1 ECNVCLGGLVDPVVTRCGHL---PCLYRWLS--SNHRDCPVCKAGVTVDNIIPLYCRGADAVDPRTKTQPGGGGGEGGHIPSRPAAERPEVPQVRCPEMVYEGQRVRGXXXXXXXGFERQPATIRNTGGVTFSAGFGFFPSLFGLQFQSFNTAQPQQN-----NEGEG-------RYASEERQQAFLSRLLLMLGSFIILCLLLF 564
            ECN+CL    DPVVT CGHL   PCLYRWL   S  ++CPVCKAGV+  N+IPLY RG    DPRTK         G  IP RPA +RPE    R P+M                GF   P+     G  T SAGFG FPSL GLQ+Q++ T  P        ++G G           E++QQAFLSRLL+MLGSF++LCLL F
Sbjct:   70 ECNICLELAQDPVVTLCGHLFCWPCLYRWLRLHSQCKECPVCKAGVSEKNVIPLYGRGTSGEDPRTKPV------SGPEIPRRPAGQRPE--SQRAPQM-------------GPFGFMAGPSA--QFGNFTLSAGFGLFPSLLGLQWQAY-TGDPMPAGFAAPDDGTGVAPVPRAALTPEQQQQAFLSRLLVMLGSFVLLCLLFF 250          
BLAST of mRNA_H-akashiwo_Contig1249.16.1 vs. uniprot
Match: A0A6A3U665_9STRA (RING-type E3 ubiquitin transferase n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3U665_9STRA)

HSP 1 Score: 136 bits (342), Expect = 3.770e-37
Identity = 85/198 (42.93%), Postives = 111/198 (56.06%), Query Frame = 1
Query:    1 ECNVCLGGLVDPVVTRCGHL---PCLYRWLSSNHRDCPVCKAGVTVDNIIPLYCRGADAVDPRTKTQPGGGGGEGGHIPSRPAAERPEVPQVRCPEMVYEGQRVRGXXXXXXXGFERQPATI----RNTGGVTFSAGFGFFPSLFGLQFQSFNTAQPQQNNEGEGRYASEERQQ---AFLSRLLLMLGSFIILCLLLF 564
            ECNVCL  +  PVVT CGHL   PCLY+W+  NH +CPVCKAG++ +N+IP+Y RGA+AVDPRT+ Q    G     IP RP  +RP+  Q+R                       R+P +     RN  G   S   GFFP+LFG+ +Q    A    + +G    A E RQQ   AFLSR LL++GS ++LCL+ F
Sbjct:   22 ECNVCLDTVSSPVVTLCGHLYCWPCLYQWMR-NHSECPVCKAGISEENVIPVYARGAEAVDPRTQQQMSDNG-----IPHRPRGQRPDAEQLR----------------------RRRPFSFGLFNRNGNGNPMSPTIGFFPALFGVPYQP--PAPVTHHPDGSPLTAQEARQQVQQAFLSRFLLVVGSLVVLCLITF 189          
BLAST of mRNA_H-akashiwo_Contig1249.16.1 vs. uniprot
Match: A0A1V9Z912_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z912_9STRA)

HSP 1 Score: 130 bits (326), Expect = 6.870e-35
Identity = 85/197 (43.15%), Postives = 116/197 (58.88%), Query Frame = 1
Query:    1 ECNVCLGGLVDPVVTRCGHL---PCLYRWLSSNHRDCPVCKAGVTVDNIIPLYCRGADAVDPRTKTQPGGGGGEGGHIPSRPAAERPEVPQVRCPEMVYEGQRVRGXXXXXXXGFERQPATIRNTGG--VTFSAGFGFFPSLFGLQFQSFNTA-QPQQNNEGEGRYASEERQQ---AFLSRLLLMLGSFIILCLLLF 564
            +CN+C+  + +PVVT CGHL   PCL++W++ NH DCPVCKAGVT +N+IP+Y RGA++VDPRT     G       IP+RP  +RPE P +R   +                   ++P  +    G    FS   GFFPSLFGLQFQS  TA  P  N +     A+E +QQ   AFLS++LL +G+ ++L L+LF
Sbjct:    9 DCNICIDRVKEPVVTLCGHLYCWPCLFQWIA-NHNDCPVCKAGVTSENVIPVYGRGANSVDPRTVKGTDG-------IPNRPRGQRPE-PSLRRRHV-------------------QEPEALVGPPGQEAAFSPLIGFFPSLFGLQFQSAATAGMPTGNLQASPLTAAELQQQVQFAFLSKMLLFVGTAVMLGLILF 177          
BLAST of mRNA_H-akashiwo_Contig1249.16.1 vs. uniprot
Match: W2QFK5_PHYPN (RING-type E3 ubiquitin transferase n=8 Tax=Phytophthora TaxID=4783 RepID=W2QFK5_PHYPN)

HSP 1 Score: 130 bits (327), Expect = 7.220e-35
Identity = 83/198 (41.92%), Postives = 107/198 (54.04%), Query Frame = 1
Query:    1 ECNVCLGGLVDPVVTRCGHL---PCLYRWLSSNHRDCPVCKAGVTVDNIIPLYCRGADAVDPRTKTQPGGGGGEGGHIPSRPAAERPEVPQVRCPEMVYEGQRVRGXXXXXXXGFERQPATIR----NTGGVTFSAG--FGFFPSLFGLQFQSFNTAQPQQNNEG-EGRYASEERQQAFLSRLLLMLGSFIILCLLLF 564
            ECN+CL  +  PVVT CGHL   PCLY+W+  NH +CPVCKAGV+  N+IP+Y RGADA DPRT+     G      IP RP  +RP+  Q+R                       R+P        N  G  FS     GFFP+LFG+ +Q    A   Q+      + A ++ QQAFLSR LL++GS +ILCL+ F
Sbjct:   23 ECNICLDTVSSPVVTLCGHLYCWPCLYQWMQ-NHSECPVCKAGVSEQNVIPVYARGADATDPRTQQVSDSG------IPHRPRGQRPDAEQLR----------------------RRRPYNFGIFNGNGQGNAFSMSPTIGFFPALFGVPYQPPAAAMHHQDGTPLTAQEARQQMQQAFLSRFLLIVGSLVILCLITF 191          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1249.16.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JXT6_9PHAE1.550e-5048.13RING-type E3 ubiquitin transferase n=1 Tax=Ectocar... [more]
A0A7S2V596_9STRA5.200e-5052.79RING-type E3 ubiquitin transferase n=1 Tax=Fibroca... [more]
W7TVM5_9STRA1.100e-4249.01RING-type E3 ubiquitin transferase n=1 Tax=Nannoch... [more]
A0A835ZFB6_9STRA1.400e-4250.26RING-type E3 ubiquitin transferase n=1 Tax=Tribone... [more]
A0A7S3HD97_9STRA4.320e-4046.63RING-type E3 ubiquitin transferase n=1 Tax=Spumell... [more]
D7FV06_ECTSI4.500e-4052.38RING-type E3 ubiquitin transferase n=1 Tax=Ectocar... [more]
A0A1Y1IV45_KLENI2.830e-3946.83RING-type E3 ubiquitin transferase n=1 Tax=Klebsor... [more]
A0A6A3U665_9STRA3.770e-3742.93RING-type E3 ubiquitin transferase n=2 Tax=Phytoph... [more]
A0A1V9Z912_9STRA6.870e-3543.15RING-type E3 ubiquitin transferase n=1 Tax=Achlya ... [more]
W2QFK5_PHYPN7.220e-3541.92RING-type E3 ubiquitin transferase n=8 Tax=Phytoph... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1249contigH-akashiwo_Contig1249:132562..147721 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7FV06
Preferred nameRNF5
PFAMszf-C3HC4,zf-C3HC4_2,zf-C3HC4_3
Model size567
Max annot lvl2759|Eukaryota
KEGG koko:K05744,ko:K10666
KEGG Pathwayko04141,ko04360,ko04666,ko04810,map04141,map04360,map04666,map04810
Hectar predicted targeting categoryother localisation
GOsGO:0000209,GO:0000375,GO:0000377,GO:0000398,GO:0003674,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005681,GO:0005684,GO:0005737,GO:0005739,GO:0005740,GO:0005783,GO:0005789,GO:0006139,GO:0006396,GO:0006397,GO:0006464,GO:0006508,GO:0006511,GO:0006515,GO:0006517,GO:0006725,GO:0006807,GO:0006810,GO:0006928,GO:0006950,GO:0008150,GO:0008152,GO:0008270,GO:0008380,GO:0009056,GO:0009057,GO:0009100,GO:0009605,GO:0009607,GO:0009617,GO:0009892,GO:0009894,GO:0009895,GO:0009987,GO:0010033,GO:0010243,GO:0010467,GO:0010498,GO:0010506,GO:0010507,GO:0012505,GO:0016020,GO:0016070,GO:0016071,GO:0016074,GO:0016241,GO:0016477,GO:0016567,GO:0016740,GO:0018996,GO:0019222,GO:0019538,GO:0019787,GO:0019899,GO:0019941,GO:0030054,GO:0030154,GO:0030163,GO:0030433,GO:0031090,GO:0031323,GO:0031324,GO:0031329,GO:0031330,GO:0031647,GO:0031648,GO:0031966,GO:0031967,GO:0031975,GO:0031984,GO:0032446,GO:0032501,GO:0032502,GO:0032991,GO:0033043,GO:0033554,GO:0034247,GO:0034470,GO:0034641,GO:0034660,GO:0034976,GO:0035966,GO:0035967,GO:0036211,GO:0036503,GO:0036507,GO:0036508,GO:0036513,GO:0040011,GO:0040039,GO:0042175,GO:0042221,GO:0042303,GO:0042692,GO:0042802,GO:0043144,GO:0043161,GO:0043167,GO:0043169,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043292,GO:0043412,GO:0043632,GO:0044087,GO:0044088,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044390,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044429,GO:0044432,GO:0044444,GO:0044446,GO:0044449,GO:0044464,GO:0045292,GO:0046483,GO:0046872,GO:0046914,GO:0048468,GO:0048519,GO:0048523,GO:0048856,GO:0048869,GO:0048870,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051146,GO:0051179,GO:0051234,GO:0051603,GO:0051674,GO:0051704,GO:0051707,GO:0051716,GO:0051788,GO:0051865,GO:0055001,GO:0055002,GO:0055085,GO:0055120,GO:0061061,GO:0061630,GO:0061659,GO:0065007,GO:0065008,GO:0070534,GO:0070647,GO:0070887,GO:0070936,GO:0071218,GO:0071310,GO:0071704,GO:0071712,GO:0090304,GO:0098796,GO:0098827,GO:0099080,GO:0099081,GO:0099512,GO:0140096,GO:1901135,GO:1901360,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1902115,GO:1904380,GO:1990904,GO:2000785
Exons8
Evalue7.38e-41
EggNOG OGsCOG5574@1|root,KOG0823@2759|Eukaryota
EC2.3.2.27,2.7.11.1
DescriptionER-associated misfolded protein catabolic process
Cds size567
COG categoryO
BRITEko00000,ko00001,ko01000,ko01001,ko04121
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1249.16.1prot_H-akashiwo_Contig1249.16.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig1249 132562..147721 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387131.6464703-CDS-H-akashiwo_Contig1249:132561..1326441681387131.6464703-CDS-H-akashiwo_Contig1249:132561..132644Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1249 132562..132644 -
1681387131.658957-CDS-H-akashiwo_Contig1249:132846..1329041681387131.658957-CDS-H-akashiwo_Contig1249:132846..132904Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1249 132847..132904 -
1681387131.668875-CDS-H-akashiwo_Contig1249:133241..1333091681387131.668875-CDS-H-akashiwo_Contig1249:133241..133309Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1249 133242..133309 -
1681387131.6793575-CDS-H-akashiwo_Contig1249:133873..1339411681387131.6793575-CDS-H-akashiwo_Contig1249:133873..133941Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1249 133874..133941 -
1681387131.6986368-CDS-H-akashiwo_Contig1249:134031..1341421681387131.6986368-CDS-H-akashiwo_Contig1249:134031..134142Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1249 134032..134142 -
1681387131.7106833-CDS-H-akashiwo_Contig1249:143403..1434681681387131.7106833-CDS-H-akashiwo_Contig1249:143403..143468Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1249 143404..143468 -
1681387131.720322-CDS-H-akashiwo_Contig1249:146945..1470001681387131.720322-CDS-H-akashiwo_Contig1249:146945..147000Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1249 146946..147000 -
1681387131.7292187-CDS-H-akashiwo_Contig1249:147662..1477211681387131.7292187-CDS-H-akashiwo_Contig1249:147662..147721Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1249 147663..147721 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig1249.16.1

>prot_H-akashiwo_Contig1249.16.1 ID=prot_H-akashiwo_Contig1249.16.1|Name=mRNA_H-akashiwo_Contig1249.16.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=189bp
ECNVCLGGLVDPVVTRCGHLPCLYRWLSSNHRDCPVCKAGVTVDNIIPLY
CRGADAVDPRTKTQPGGGGGEGGHIPSRPAAERPEVPQVRCPEMVYEGQR
VRGGGGGGEGGFERQPATIRNTGGVTFSAGFGFFPSLFGLQFQSFNTAQP
QQNNEGEGRYASEERQQAFLSRLLLMLGSFIILCLLLF*
back to top

mRNA from alignment at H-akashiwo_Contig1249:132562..147721-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig1249.16.1 ID=mRNA_H-akashiwo_Contig1249.16.1|Name=mRNA_H-akashiwo_Contig1249.16.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=15160bp|location=Sequence derived from alignment at H-akashiwo_Contig1249:132562..147721- (Heterosigma akashiwo CCMP452)
GAGTGCAACGTGTGCCTGGGCGGCCTGGTGGACCCCGTGGTCACACGCTG CGGCCACCTGTACTGCTGGCGAGCCGGCCGGGAGGGGGGGGGGGGGGAGG GGGGGCGGCGCGGCGGCGTGGCAGCTGGGAGGGGGAGGGGGGCTGAGCCC CAGGGGGGGCAGCAGCAGCAGTGGTGGGGTCGGTGGGGGCGGGCGGGCGG GGAACGGTCAGGTAGAGTGGCGAGCGGGCGTGGGAGTGAGAATTGGGGCT GCAATGCGGGAGGAAGGGTGGACGGAGGTCTCTATATAAAGAAGCTGCTG TGGGGTAGGGAGGAAAGGGTTTCTGCCGTCATTTCGAAAGCCTTCCTGTG AGGTTCACCGCATCAATCGCCACTTTCCTTTTTAGGATTGTGACTGACAT TGCGTGACTATTACTGCATAAATGTGCTATGTATACATTGGCTGTTTATC AGGATTGCAGATTAGCAATACTCACACAGTCTAATGCTTCACAAAATGCA TGCCTATCAAGGACCCAGGCTATAGCGCCAAAAAACTGCGATAGCGCATA AGGTTGGGGAGGTTACAGTCATAGCTGTAAAGTTACGGTCGATTTGATTT TCTCAAATCAGAAACTGTCACGGGTGAAAAAAATAACGACCATTACGGTA AAACAAATCACCACTATAGTTCCCCCCACCTTCACCCCGAACACACACCC TCCTCCATTTTGTGGCTCCAGGCCGTGCCTGTATCGGTGGCTGTCCTCCA ACCACCGGGACTGCCCTGTCTGCAAGGTACTGGCACGACTGATGGCCTCA GTGCTACGATGCTATAATATGCATATGTATTTAGCTCTGATTATACTGAA ACCAGGCGACTACTAACTCATACAGAGGGCCATGAGCACTTTTAGAGCCA CGGCTCATGGTTCTCATATGCGCATGACCTTCTGTATTTTTGATGTGATC AATAACACCTACACCTTGCATCTCGGTCTATGTATTTTACAACATATATT TATGCATTCTTAAATTTATCCAAAAATAATCAACACCTTGCATCTATGCA TACGTTTCTTTGGTAACCTATTTATGTACTAAAACCTGAACATGAAATCC CAAAACTCAAACCAACAGAAAAGAAACATACCGAAACCATATATGTCTTT GTGGTAGAGCCTACTGAAACCTAAACATGAACCCCCAAAACTCAAATCAA AAGTAAAGAAACATATTTGTATACCAAAACCATAGCGGACCACAACAAAA CAACCACAGCACACGCCACTATACCTCTGAAAGAAAATGGTAATCCCCTC ACCATCCTCCTCCACCTCTTCCTGGAACCCCTGGTCCACAGATCTATGCC ACCTTGATGAGTGCGAACTACATGTGGGCACTCACCCAGCTGATGACTGT TGAGAGAGGTTTCTGCCACTAAGCCGAGAGCAGAGTAGCAACACGCCTGA TATCAGCCTGAAAAGACTGATGGGCAATACCCTCCACACTGACAATCAAA AGGGAGAAAGTAGCACGGCGCTCCTCCACAACAGCAGCCTTGTATTTCTT CACCTTTTCACAGGCAGCGGCATTGATGACTTTCTGGTAAGAGATGTATA TATTGGTTTGCACGTCCAGGGCTGCCAGCAGGTATCATAAAGACGTCCCT ACCGTGCTCCCACATACCCCTCACAACAAAATCCGCTTCATGCCATCGCT CCCTCCATTCCTGGTCCGCTGCGACGCCTCCCTCACCACTGGCTCCCCAG CAGTGCAGTTGTTCCAGGCTTTCCTGGTCACCTCCTCCACAACATCCCGC AACTGGTCGTGACCCCACTCCACATATCCCCCTTCATGCAGATGTGGGCA TGATCTGTGGAGAAGTGCTTGTCGCAACCATGGCACTTCTTAGGCAACCC CTGAAGGTTCTACCAGCACACGAGGTACACCTGGTCACGCTACTGCTGAG TAGACAAGTCAAATAACTCCTTCGCCCGGGGCACCACGGACATCCACGAC ATGCCCTTGGTGTCCACCTGGCTCCGCACCTTCACCCTCTGCTCTGGCCT CAGCTTGCTCAGCACTTCCTGGTATACCTAGCCTTGAACTAATCTTTCTC CGCCCTGCGCTTCTTCTGCTGGCCAGCATAATCGGCACGCTTTCTAGCCA CATCCAAATGTCCACCACCCAGAATGACACCGCTTACCACGGAGGTGGGG GAAGAGGATAGCTCGTTGGAGCACTGCGTGCGTGGCCTTGGTTGGGCCAG GAATACCAAGCCCCCCCATCTAGGGGGGAGCTCAAACAACTCCACCATCT CAGCCTCAGAGAACTGCCACCTGGCAAGCAGCGAAGGGAGGGATGATCTC AAGCCCGATCACACCGTTTAGCTCCAAAAACCAAGCAGAAGACTCCGGGG TCAGCCGCTGAAGGAATTCCCACTTACTCTGCAGTGACATCTGGTGAAAG CCATGCACACAGACTGGGGAAACTTCTCCGCCGTCCGCGTCGGGTGTGCA CACACTTCACCCAAGTGGTCTTGTCCACGTAGGCCTTCGGCCCGCCCCAA AACCTGTGATGAGAGACGATCTCCAACTCGAGGTACTTCACAAACACCTT CTTGGCCCTTTCCCCCACGTCCGTCTTTACCACCAAAATAGTTTTGGGTG GCTCAGAGTGGTAGCCATACCTGGAGCCCTCCTTCATCAAGACCTTCACC CAGCCAGGATAGCCTTGAGCTTGCCGGCCGCCGAAGAATCATCTGCAAAA ACGGCATCTGGATGAGCTTCTCGCTTTTTTCAGAGAGGACCTCGGCGACT TTCTCTTTCACCATCACGAACATAGGCCTCACTTCTACACCGCACAAGAG CACGGCTATAGGGTCTCCCTGGGCCCACCCATCCTCACTGTAGAGGACCA GCAGTGCCATCCACAAAGATCATCTTGTAGCCCTTGTAGGGGTTGAAATA AAGTGGGCAGCTCTGGGCGAGGACTTCCTCACCTCTGCTAAAGTGTGTTC TCAGTTGAGCTGGTTGAAGGCATTGGCTTTTTTTTTGTCTATACATATTT CATCGATGACACCGCATCCACCTCTGGATCTCCCCACTATGTAGCATGAC CGTTGTCCAACAACCACCTTTGAAGATCCTTCAAATGAATGCCATCGGGT CTCGCGGCCCTGTGGAGGCAGGACTGGGTGGCATCTAGAATATGTTCTTC ATTTATAAAATGGGTTTGGGAAGAGGAGGAAGCTTTTCTTCTTCTTCAGA TGGAAAGACGGGGTTGTCAGTTGGAATTGCATTGGGTGTCTGTCCTTGAG AACTTCAAAAGCCAAACGTCCCTAACAATTTATAAATACCCCCCCCCCCC TGGTCATTGAACCCAAAACAGATATATATGTAATAACATATATGTAATAA CATATATTATTTATATATTTTTAGAGGTTGACCACAAAAAATAGCGAGTA AGCTGGTTATAAGAGCAGAAGCCACTTCCATGGTCAGTGAGAGTGAAGTT CTGCATCTGTAGAGCAATAATGGTTCAAGGTTTTGAAAAATAATTTTAGT AGGATTCGAAATCTACAGTAGTGTTTCGGGTATGCCATTGGAGTGCACAA CAAAAAGTAAACCAAGCAGCAGCGGCAGTTCGTTCTACTTATTAATAACC CAAGCCCCCTCCTCTTCCAGCAAAATGATTGAAAGAGCTAAAGACTATGG AAGGTTGTCTCTTCTTCTTCTTCTTCTTCTTCTTCTCATTATTTACTACA CGAAGCTGAGTTTCATCCTCGTGGTCAAAACACAGTTTCCAGCCACCGCA TCATGTGGTTTATGAAGTCACTGCCTATACTAACCCCATCCATACAAAAA TGGGTGGCAAGGGCCTGGCGAAGAGGGCGAGGAAGAGGAGGGTGTGAATC TCGTGATGTATATTCTGTATTTCCATTCTTTTTCTTTTTCTACTGAATTG TGCTGTTGGCAGCAGGGATGGAAGGAGGAGAAGAAGGAGAGGGGAGAGGT GTAACCGTAACCGTTTTTTGTCTTTTCGGCTATTGGTGTTGTTGTGCTGC TGGACCACCTTCATTACCGTGATGGGACCTAGTTGGAGTTTGGCCAACTT GGTGACTCTGTGAAGAAGGCATGACTTCATGTCGAAACGTCAGGAGCTGG AGAGGCGTAATATCATTTGCTAGAAGATTAATTAATCGTTTCGTACCATC AGTGATCACTTTCATTTCAATATATAACTCATTAAATATGCATCAATTCA CAGGCTGGTGTTACTGTTGACAATATCATTCCACTGTACTGCAGAGGAGC AGATGCTGTAGATCCTAGGTGAGTTACTAGTGCTCTTCCACATTGCCAAA AAGGTGTGCTAATGGCTACTGGATGTTTTGCTTCTGTTTTTGTCAGCCGT TTCAAACTGTGGTGAGCATTAGCATTTTTCTGACATTTCTGACTTCAAAT GTATGATATATTGTATAACTTTTTATCATTTAATACTGGCAATTAAAGGC CGTCTTCTTCCCGCTTTTGACCAGCTCCTGTATAACCTTACATCCACGAG ATTTAATGACCAAAGCTAGTTTTACCCTCTTGTTGGTCACAAAATCCCTA TCAATATGACCAAAACCCCGTTTTTATGACCAAACCTACCAATTTACGCA TTCTGATTGATTGTAAAAGTGCATTTGTATTCAGTCGACCAAAAAATGAT GACGTTCGATTTCCATTGGTATAGACAATCTTAAAAAAAAAAAATTATCC ACTTGTTTTCCTGCATTTTCTCGTGTTTCGTTTAGCTTGGATGACACAAA CGATCAAAAAAGAACAATTGATGTATGAACGTCCTGGTTAGTATAACTGT ATAACTTGTAATCCTTGTCGAGCTCGTCAATTCAAACTTCGATTAGAGAT TTATTTTTTTCATTGAAGTCATGATAATGTCTTCTGTGTCAAAGAAAGTT TTTAGCCTTGTACTGCTGTGTTTACAAAATAAATTAGATTTGTTTTTATA AATATTTTGGACGATTCGAATAAAGACAGATCGCTTAAACATATCCCAGA TTCAATGACCAAAAGCCATGTCGTTTGACCCACTTTGGTCATAATAAAAT ACTTGATGTTCATTCGTCAACTAGATTTTTAATGACCAAAATAATGACCA AAGCCATGAAAGGATAAATATATATAAGACAACAGGCATCTATTCGCATC TGCATTGTCGACACCTAGCAATAATAATATAAACCAGATTCCATGCCTTT GTGTGGGCGTGCCATTGTCGAAGAAAAGTCGACCTGTCTACTGTCATATG TTTTTTACAAGCTACTGTTAAGGTCTTGTTTTCCAACATATATACAAACC AGCACTCCCCCCCCCTTCGGGGGGGGTCGCACTGGCCCTCCCGGGGGGAG TTGTGGTTTATGTATACAGACAGACACTCGAAAATATAGTATTAGGATGT GCGCTATAGTATTTCTGGTGTTGTCAGACAGACAGACACATCCATAGTTG TGTTGGCTGGTAAAGTGGTGTACGTAGTTGTGGTATGGTACTTGGTGGGT GGTGGGTTGACCTCGAACTCTCGAGCTGAGCCCTCAAGAAGCCCTACAGG GGGCTGGCCGCTAGGCGCGGGGCCCCAAAGTGTGTTATTGTGCAGGTTGA TGAATCCTGGTTGTTGTGCGGCACTGGCTGGCTTGATGCATACACAGACA GACATATGTTGCTCTGCCCGGTTGCTTTAGAAATTAAATAGTATTAGGAT ATACTGGTGTCATGTAGTTGTGGTATGGCACTGGCTGGGTGGTGGGTTGA ACCCGAACTCCCGAGCTGAGCCCTCAACAAACCCTACCGCAGTTGGTTCT TGATGATGCATAAAAGGACCCTGCTGACTCCGCATTTTGACCCTACGGAC ACCCTTCAATTAGCCCTCGGTAAGCCTCAAATAAGCCTGCCATTTCCGCA TTTTGAACTGGCCGGCCTGTTTTGGGGCTAAAATGTTCCTGCTGAGTCCG TACCCTGCGGTTCTCAAATTACCTAGATAGTTGAATCCGTATTTTTACCC TGGTACCTGTGTTTTTAACCTGCGGGTAATGATGATGGTGTGTGTGTAAC TGTAACGACGAGTTGCTGACGGGAAACACTCATGTTGGTTGAAAACATGT CATCGAAATGGCTTTGTTTGGGGTGTGAACGATTCAACATTTGAGGTCCG CGGCGGCGCATATTTTTTTGGAGAGGGACGTTTCGATCTGTTTTCTCATT AATGACATAAAGTTTTTGTACTTCAAGTACATACGTTTTTTTGGACGGAT CTAGCCAAACTTGAAGTGTAAAACTTTTTCTCATTCAAGTACAAAATATT ATGCACTTGAAGTGTTAAACTTTTTCTCATTGAAGTGCATAATATTTTCC ACTTGAAGTACAAAATCTTTCGTCATTCAAGTATAAAGTATTAAGCACTT GAAGTGTAAAACTTTTTCTCATTGAAGTGCATAATATTTTGTACTTGAAG TACAAAATCTTTTGTCATTCAAGTATAAAATATTAAGCACTTGAAGTGTA AAACTTTTTCTCATTAAAGTGCATAATATTTTGTACTTGAAGTACCAAAA CTTTTGTCATTCAAGTATAAAATATTAAGCACTTGAAGTGTAAAACCTTT TCTCATTGAAGTGCATAATATTTTGTACTTGAAGTACCAAAACTTTTGTC ATTCAAGTATAAAATATTAAGCACTTGAAGGCTAAGTGGTCTGCTGCTCA ATACGGAAGCCGGGCGGACAGGGAGAGTGAACTCCGCAGTGTGGAAGCTA TGGCCGGCCGGTTTGCGGAGCGGGGCACGACTATTGTCCTTCGCAGAGCG CCCGAGGAGGAAGGGAGTCTCCCTGGCGGCGACGCAGCTGTTGCAGTATT CCCCAGGTTTTGCCGTCGGGCTGCGAGCCACACCTCTGCACGACTGACAC TGCACGCGGACCACGGCCAGGGAATGGACCAGGACGGCAATTACGTGACT GTCCTGGTCATTGACAATCCCTGGGGGGGCATTCCTGTTGCTGCTCTGGT GTGCGAAAGAAAGTCCCGGGCTTGCGTGGGCGCGGGCCTGCGAGCCTGGA AAGAAGCACCTGGGGAATGACAAAAGTTTTGGTACTTCAAGTACAAAATA TTATGCACTTCAATGAGAAAAAGTTTTACACTTCAAGTGCTTAATATTTT ATACTTGAATGACAAAAGTTTTGGTACTTCAAGTACAAAATATTATGCAC TTCAATGAGAAAAAGTTTTACACTTCAAGTGCTTAATATTTTATACTTGA ATGACAAAAGTTTTGGTACTTCAAGTCCAAAATATTATGCACTTCAATGA GAAAAAGTTTAACACTTCAAGTGCTTAATATTTTATACTTGAATGAAAAA AGATTTTGTACTTCAAGTACAAAATATTATGCACTTCAATGAGAAAAAGT TTTACACTTCAAGTGCTTAATATTTTATACTTGAATGACAAAAGATTTTG TACTTCAAGTGGAAAACATTTAGGTAATTTAGCGTTCCAGGTTATGTACT TAAGTAGTCGACTTTGCTTTTATGTACTTGAAGTACAAAAGATTTATGTC ATTAATGAGAAAACAGATCGAAACGTCCCTCTCCAAAAAAATATGCCGCG GCGGCGGGTGAGAACTATGTTCACGCAGCAACAGCAAGAATTATGCAGGC TGAGTCCGTCCGCGTGTTTGCCCTTTTCCTTTGCCCTCCTTCGGCCTATC TCGTTAAATGGAGAGAGAAGAGGAAAGAGGAGTACGGAGGGTCTTATTTT ATCTTTCTTCTATCTTTCTGGATTCTTCTTATTTCTGTTTTTGACGTTGA GCGGGTTTGAGTCGGTGCTATGGTTGCATAGGAATATCTCAAATTTTAAT TCTATGAGTTTTGTCATTTTTACGAAAATTGTGAGTTTTTAAGCCCCTAT GTTCAACTTCTACTTCATATTCATAATAAAGATTTGACGAATTTCAATTT TCAAAATTTTCGGCACTTTACGGGAATTTCATGAAAAGTAACTGGAATTT GATATATTTCTAGTCGCTGCTTCGTGGTATATGATAGAGGCGATGGGTAT AGGAGGAGGACGACTGACTGGTACCGGTGCTGGTGGAGGGAAAAAGCAGC AGGAGGATTCTTCTCTTTTCTTTCCTTTCAGGTTCAACGACAACAATTGT TGTCACGTGCCGCCATAATTGAGCCGCTGCTGGTTGTTGGTAGTTGATCT TCTTCTCTTATTTGTTCTTTGTTTGTGATACTCGAAGTTGAAGTTGATGA TAAGCACCATTCTTCTCGTTTCTCTTCTTCGCCTTTGATCTTTGTTAATA TGCGGGTTTGCATTTGAATTATCGCGCAACATGTCACGTGCCGCCATAAT TGAGCCGCTGCTGGTTGTTGGTAGTTGATCTTCTTCTCTCTTATTTGTTC TTTGTTTGTGATACTCGAAGTTGAAGTTGATGATAAGCACCATTCTTCTC GTTTCTCTTCTTCGCCTTTGATCTTTGTTAATATGCGGGTTTGCATTTGA ATTATCGCGCAACCTGCCAAATTGTCTCTGTTCCTCTGCGGGAAAATTAT GACTTCGACTTGTTCACAAAGCGTCTTCTCATCCACATTTCCTCAAAATT AAAACGGAATGTTGTTGATGAAACGAAGAGGAATTGCGCTTTGCTGCGCT TTTTTTTTTGGCGGAGTCGAGATACATACGCGAGTTTGCGATGCGAAATA TAGTATACCAGCCCTCCCCCCCCCTCCGGGGGGGGTCGGACTGGCCCTTC CGGGGGAGTTGTAGTTTATGTATACAGACAGACACTCAAAATTACTTTGT CATGGTTGGGCATGTAAAAGAAGAAGAAGAAGAAGGAGTAAATGATGTAC TACTGTTACATTATTATTTTTTCATGACGATGATGCGTTTTTGTTGTTGT TGTTATCTGGCAAATAATCTAGATATCGTGTTTCACATTTTATAAGCCCG AGGCGGAATGTAAGCCCGGGGGAGGGTCTGGGACCCGGGCTTAGCGTCGG CATTTTTCTCATTTTATATGCCCGGGGTGGTATCCTCCAAATATATGCCC GACCACGATCCCTCCAAATATATGCCCGACCACGACTTCTCATTCTCATT CTCCATCATCATTGTCGTCGTCGTCCTCGTCGTCGTCGTCGTGTTTGGAG GAGGGAGAGGGGGAAGAGCACCAGACAGCAGCAGCAGCAGCCAGCAGCAG GTGACGATCGATGATGATCGTCGATCGTCGATCGTCGTCGTCGTCGTCGT CGTCGTTCTTCGTCGTGCAGCATCAATTTCCAGATTCCCACAACTTTTAG AACTTTTTAAAATAGCAGAAAACTTTCTTATTTCCAAAGATCAATGACGA TGGTCAAGCGCCATAAAAATGATGAAAATCCCGAACAGATTGCGCCAAGT TTTGATGAGCCTCTATTTTTCAAGAAGCTTTGGGAACTATGAGAAATGCA GATTGGGGCTGAAAGCATGAAGTATATGTAAAAATACCAAATTTTAAATG AGAACATGAACAGCGCCTATGCGTCGTTGTCTTCGACTTCGAAATAATAC CATCATCTTCGAGCGAGGCCTTGATCGGTAGGGGAGGGCTTAGTGTCGTA CTTTTTCACCTAATGTACGCCCGGGGTAGGCTCTGGGACCCGGGCTTAGC GTATTGTAAGCCCGGGGCTTATAAAATGTGAAACACGATACGTCCCGATA TTTATTATACTGTCATTGATTATTCTCATGAATCCAATTCTGGCACCGCA ACCTCAAACTCAATATACACATAGATGATAGTAAAGAAATAATAATAATA TAATGATAATATAATGATAATAATGATTGCTTGCTGCACTACCACTACAC TACGAAGGGTGGTCATCTCCCTGCTTAGCCTTTTTCTGTGGTGGCTCCTC CTCTATGCATTCTTTGCATTTTTCCCTCTGTCGAAAATCATGAACTTTTT GTTTGATTCCAAAGATTGGCGACCACCCACTGGCACTTGATGACGGTTTG CCACTGAGGAATGTGTTCCTGATCTGGCGGTGCAGCTTTTCCAGATGAAT ATATGAAGAAGAGGGGATTGACGGCATTGCATGGCTTGGTAGCACAAAAG TGAATTCTGAGTCTTTCACTTTTTTTTTCTTTGCAATCTGGAAGAGAGCA CTCTGCGTCTTGACCTGTTTGGCAACTGCTTCCCACAGCAAGGGGATCTG GGTGGGAAAGACGCAGTTCTTGTCTCTTGCTCCATGACGTAATTCTTTTT TCAGGAGGGAAAAATTGTTGCTGTCATAACCCAGCTCTTCCAGATTCTGT ATAGAATGTTGCTGTTCAAATTTGACCAACGCTCTTACCCATCTTGAATG GAGCCATTCGTAAACACCACCATTTGAAAATATTTTTTCTCTTTTGTGAT ATACTCTTACTGCGCACAATTCATAGGGTGGCAAACGGTGGAACAGTTCA GTTGTTAGAAAAGATTGGAAATTTTTGGGGGAAAGATGGGAAGCACCCGA ACATGTAAAGAGACAGTCAATATCACAACGCGTTGCACATTTGTACAGAG TGCTTAAAAACCACCGGCGGGTCTTTTTTGGTCGATGATAACCGCTGACA AAATTTTCTGGCTCTTTGAACTTGAAACTCCCACTGTTGAAATATAGCGA GGGGTTGTCTTCGAGTTGTTTACTTAATCTGCCATCAGAAATATAGTCGT AGTTGTTGAGGAATAGCGATTCTTTCCTCTTGGCTTTGTAGATACTGGCA TTATGTACGTAAACTGCCTGAACATGCTGGCATTGATGGCACGGATAGTC TTTGTCTTCTTCGGATGATTTTGTTTGCTTGTTGCGCTGCTGGTGCTGCA TTGGCGGTTCTGGGCGAAGGTAATTTGAGAGGAGTTATTAAGAGGAGGTT GGTTCTTCTTCTTCAACCTTGCCGTCTTGCCATATTCCTTGTTTTCTTAC TGCTTTTTCTGGTGGGGTGGTGGTGTTGTGGTGGTCGTGGTTGGAGACAT CCGAAACTCCTAATAAAAAGTTTAGCCATTTTCACGGGAATTTTGAGTTT TGTGACTCTCTGTACACCTGTTCCTCTTTTTTTTTAGGAACAGGGCGAGA AAAAGAAGAGGAAGAGGTGTAGTGTGGAACTCTGTCAGAAATTGGCGGGA GTTAGGCGGTAATTTCGTCATTTTAATAGGAATTTTAGCGGGAATTTGGT CATTTCAAATTCCCAAAATTCCCGCACTTTTTCGGGAATTCCACAAAAGT TGCCGGAGTTTCGAGCGTTCCTAGTCGTGGTCGTGGTGGTGGTGGGTGGT GGTGGTGGTGATGGTGGTGGTGGTTGTCATGATAGCCTTGGTGGCGGGGC GAAGACCGGGCGGTAACCTGATGATATATCCGTATAGTTCGGGGCCCATG ATGGTCAACCCTGATGCGGGATTCTTCAACTTGACAAGAGAAGGAAGAAG ACCACAAAAAGAAAAAAGAATCCACAACAACTTCAACATGAGAAGAGGAG GCAGGTAAATTTGACCGTTTCGGAGGAAGAAGAAGAACATACTCTGAATC GATTGAACTTGAAACGTATAAACTTGAACTTCGATCAACTGTGGGGCGGG GCGAATAAGAGAAGGAAGAAAACCGCAAAAAGAAAAAAAGAATTAACATC AACTTCAACTTGAGAAGAGGAGGCAGGTAGTCAAAATCGTGTTTTGACCG TCTTGATTGGCGGCTTGGAATATTTTATTCGCCCGACCGACAATAAACAT TTTAAGATGATGTCTTATCTATGTCCCCTCTGCGGCCGAAACCATGCAGA TACATGTCTCCTCTGCGAAACTCTTGGCACTTGTGAAAAGATCAGCAAAT CACAGGACTGGGCACGGATGTGTTCATCATGCCGTCAAACGAATGCCGTT TCTTCCATTCTCAGAGTGGCAGGTCCCAAAATTGTCATACCTGGTCAAAA TGATCTGAACAGAGTGCGCATGAGTTTTTCATTCTGCCACTGATCTGTCT CTTCAAAAATGTCACACATGTGCCGTTTACTCATCTCCCAAGAGCATGAA ACATCCTCTTGATCTGTTCGAGAGGATTTGAAAGGGCAGTAACATGAACA CTGGCACGGGGTGTGTTCGTCAAAAATGTAACACTGAGGCGGTTTCATGA TCTACCAAAAGCCGAATGCAAGCCCCATAGAATGTTAACGTTGTGTGAAC ACTAGGGAATTTGAATTTCAGTACTGGACCTGTCCTTTAAAATGTAACTG CGATGCCGTGTTGCTTTCGCCCAAGAGGTGGTGCGGGAACTGGAATGTCA ACGCGAACTTGAGCAAATTTGAAAGACGAACTAAAAGTAGGTCTGCAACG TCTGTTCATCAAAATGTCATGAAGCTGCCATTCCTTCGTCCACTAAGTAC ATGCGTTCGTAATTATATTACGCGGCCACCCTTGGGTGGGATAGAAAAAA AAAAAAAAAAACAAGCTCACTCTTGTCAAAGAGGTGGAGAGGGAGGAGCA GACAGCGCGGCTTGCGCAGCAAGAGCTGGGCACTGACCTACCTCTGTTGT ACCTAGATATATATTTAACAACAAGGAGTGGCTGTTGGAGTTTGAGCCCA AGTAGTCCCAAGGACTGGTTGTTTCTAACAACACTAAGAAACGGAACACG GAGAAGCTTAGCCCCCCCTCCGCATGGGAGGAATAGCAGTCGAGGGGGGG AAGAAGATAGAAATTCTGGGTTTGGCTGTAGATCCTAGGGGGCACTGGTC TTAACATATACAAGCAATTGCTTCAGATGCCCGGAAGAGCTTGCGAACAA TCAGAAGGATGAGCCACATGCTTGATGACAATAGTATCATGAGGGCCTAT AAAGCTTCTGTGTGCTCCATCCTCAAAGACTGTGGTAGCCTGGTCTACTG GAGAGCTGAAGAAGGCCATTTGAAGAAGCTTTTGATAGAACTCGAGAGTG CTGTGGTATTACACCGCAACCCTGACCCTTATATGCGGACCCCCTTCACT GAAAAGTAGAAGGGAATAGGCAGGCTGCCATTGGATTCACCTGCAGACTG CTGGATGGAGGGCGTGGTTTGGCTTCACAACTTGGCACCAGAAGTTGATG ACCCCATCTGCCCCAAAATCTCGGAGATCAGCTCCACTTACTGCAGCACG CTCACAGCACATTCATCAACTGAAACCAGTTCGCCTTCCACCCAACTCCC TGGAAACTTTCAAAACATGCTATAGAGCTGAAGTTCCTGGCTTATATGGA GCAATCTTCAGTAGAAACCCCTCTCCATCAGCAGCACATGCAAGCAAACC GTCTTGTCAGAAGACAGCTGTACACACATGGGTGATAATGGGTATGTAGA TAGAGGTAGTAGTAATAATTACATTGAGCATTTCTGTTGATCACTTGAAT GCTATGTAGAACGGGGGGGGGGGGGGGGGGGGGGTATCGCAAATGGTCAT TTCAGCATTTGGCAACAAGGTGGCTTTCTTGCTTCATCCCCCGAAGCCCA GTTTTCAGGCCCTTGGCCCCCCACGGCAGGACGAAAACCCAGCCGGGCGG CGGCGGCGGCGAGGGCGGCCACATCCCGAGCCGACCCGCGGCGGAGCGGC CCGAGGTGCCCCAGGTGAGGTGCCCCGAGATGGTATACGAGTGTCCGCGG CAACTGCTGGGGGGAGGCATTCTTTGGGGGCGAGCCAGGAGGGACCTTTT GGGCGCCCGCCTGGCGCTGGGCGGGTAGAGGGGCCAGCGGGTTAGGGGAG GGGGTGGTGGTGGTGAGGGGGGTTTCGAGCGGCAGCCGGCCACGATACGT CTTGTAGTAGATGGACCCCTGAGAGGGTATGTGGCCCTCCCCCCTGAATA GTAGTATCCTGGAAGTCTGACTGTGTGGCTGGGTATTAGGCCATCTTAGT GGATAATGTCATGCAAGGCGGATGATGTCATGAAAACTGTGGGGATTGGT AGGGGTGCACAATATGGTGGTAGTTCTATACATCTAAACAAGTATATATA TGCACCTATGGAGAAAACAGTTCATTGTTGAACAAAATATGATGGCCCAT GTACCCCTCCTTCCCTAATGTGGGGAAAGGAAGGAGCAGGACAGACATGC TGGCAAAATGAAAACTATAGCCTTCATCTTTCTTATTGCTGCAATCTTGG TGGTCAGGCAACAAATGGAATACCCAACCTTTTGGTAGTTCTATACATCT AAACAAGTATATATATTCATTGTTGCACAAAAGATGATGGCCCATGTACC CCTTAAGGAGCAGGACAGACGTGCTGGCAAAATGAAAACTATAGCCTTCA TCTTTCTTATTGCTGCAATCTTGGTGGTCAGGCAACAAATGGAATACCCA ACCTTTTTGGAGGAAATACAGGCGGGGTAACATTTTCTGCAGGATTTGGA TTTTTCCCGTCACTTTTTGGACTACAGTTTGTAAGTTGTACAAGTATTTA AATACTTCATGTATATATATACCTCAAATGTATTCGCTCTTGTTGCACTT GACAACAACGGCATCCTTGTTTACCACAAAGAGATGTTTGTTTTTCAATC TAGGAGATGAAAATTCAAATCTCCCTGTCCCCTGTCATTATGACACTGAA AAATGCTTTAAATAACAGTCGTTAACCAGCGATCAGATTGTATGTTTGAT TTTGGTTGGCAGTATTTCAATATATATATATATATATATATATATATATA CATCATAGTAATAAATGAAATCTTATGTTTTTGATTTGATGATGGTTGGC ATTAACACGTGTTGCAGCAAAGCTTCAACACAGCACAGCCCCAACAAAAC AACGAAGGTGAGGGCAGATATGCATGTTCTTCCTAAACAGCTTTTCATCT GGTTTAATACTGTGCTTGTTGCTGATTATCTCTTCCATAGTATGACGATG CCTGGACCATACTTGATACTAGTATAATATGCGTCCTTTTTTCAATATGC ATTGTTTGTTATCATGCTATCATAAGTGGAGCCTTGATTTCCTTCACTTT TATTCTGATTTTCAGAAAACATGACAGCTGAGGAAAGACAACAGGCATTT TTATCAAGGCTACTCTTGATGCTTGGATCTTTTATTATTTTGTGTTTGCT TCTTTTCTAG
back to top

Coding sequence (CDS) from alignment at H-akashiwo_Contig1249:132562..147721-

>mRNA_H-akashiwo_Contig1249.16.1 ID=mRNA_H-akashiwo_Contig1249.16.1|Name=mRNA_H-akashiwo_Contig1249.16.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=567bp|location=Sequence derived from alignment at H-akashiwo_Contig1249:132562..147721- (Heterosigma akashiwo CCMP452)
GAGTGCAACGTGTGCCTGGGCGGCCTGGTGGACCCCGTGGTCACACGCTG
CGGCCACCTGCCGTGCCTGTATCGGTGGCTGTCCTCCAACCACCGGGACT
GCCCTGTCTGCAAGGCTGGTGTTACTGTTGACAATATCATTCCACTGTAC
TGCAGAGGAGCAGATGCTGTAGATCCTAGGACGAAAACCCAGCCGGGCGG
CGGCGGCGGCGAGGGCGGCCACATCCCGAGCCGACCCGCGGCGGAGCGGC
CCGAGGTGCCCCAGGTGAGGTGCCCCGAGATGGTATACGAGGGCCAGCGG
GTTAGGGGAGGGGGTGGTGGTGGTGAGGGGGGTTTCGAGCGGCAGCCGGC
CACGATACGAAATACAGGCGGGGTAACATTTTCTGCAGGATTTGGATTTT
TCCCGTCACTTTTTGGACTACAGTTTCAAAGCTTCAACACAGCACAGCCC
CAACAAAACAACGAAGGTGAGGGCAGATATGCATCTGAGGAAAGACAACA
GGCATTTTTATCAAGGCTACTCTTGATGCTTGGATCTTTTATTATTTTGT
GTTTGCTTCTTTTCTAG
back to top