prot_H-akashiwo_Contig1243.3.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig1243.3.1
Unique Nameprot_H-akashiwo_Contig1243.3.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length134
Homology
BLAST of mRNA_H-akashiwo_Contig1243.3.1 vs. uniprot
Match: A0A7S3XU57_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XU57_HETAK)

HSP 1 Score: 228 bits (581), Expect = 1.770e-72
Identity = 104/133 (78.20%), Postives = 119/133 (89.47%), Query Frame = 0
Query:    1 MFDQLAGSWYFSSMDMLWAYWSIPLRETDRHKTAFTLRNKKYCWRVMCFGLTNAPATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFSTHLLNLEKIFKRMIAANLKFKLPKCLFGASQVPWLGHIITREG 133
            MFDQL G++YFSS+DMLWAYWS+PLR+ D+HKTAFT+RNKKY + VMCFGLTNAPATFSHLVNKVFQG  +DFALCFLDDVL ++G +FS HL  LE+IF RMI ANLKFKLPKCLFGA+QVP+LGHI TREG
Sbjct:   35 MFDQLEGAYYFSSLDMLWAYWSVPLRDEDKHKTAFTVRNKKYAFNVMCFGLTNAPATFSHLVNKVFQGCQHDFALCFLDDVLCYTGPDFSLHLRQLEEIFIRMIKANLKFKLPKCLFGAAQVPFLGHIATREG 167          
BLAST of mRNA_H-akashiwo_Contig1243.3.1 vs. uniprot
Match: A0A7S3XVA0_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVA0_HETAK)

HSP 1 Score: 212 bits (540), Expect = 2.740e-64
Identity = 95/133 (71.43%), Postives = 116/133 (87.22%), Query Frame = 0
Query:    1 MFDQLAGSWYFSSMDMLWAYWSIPLRETDRHKTAFTLRNKKYCWRVMCFGLTNAPATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFSTHLLNLEKIFKRMIAANLKFKLPKCLFGASQVPWLGHIITREG 133
            MFD LA ++YF+S+DMLWAYWS+PLRE D+ KTAFT+RN+KY + VMCFGLTNAPATFSHLVNKVFQG   +FALCFLDDVL +S + F+ HL +L +IFKRM AANLKFKLPKC+FGA+Q+P+LGH+ +REG
Sbjct:  173 MFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKCIFGAAQIPFLGHLASREG 305          
BLAST of mRNA_H-akashiwo_Contig1243.3.1 vs. uniprot
Match: A0A7S3XV63_HETAK (Hypothetical protein (Fragment) n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XV63_HETAK)

HSP 1 Score: 212 bits (540), Expect = 9.520e-63
Identity = 95/133 (71.43%), Postives = 116/133 (87.22%), Query Frame = 0
Query:    1 MFDQLAGSWYFSSMDMLWAYWSIPLRETDRHKTAFTLRNKKYCWRVMCFGLTNAPATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFSTHLLNLEKIFKRMIAANLKFKLPKCLFGASQVPWLGHIITREG 133
            MFD LA ++YF+S+DMLWAYWS+PLRE D+ KTAFT+RN+KY + VMCFGLTNAPATFSHLVNKVFQG   +FALCFLDDVL +S + F+ HL +L +IFKRM AANLKFKLPKC+FGA+Q+P+LGH+ +REG
Sbjct:  173 MFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKCIFGAAQIPFLGHLASREG 305          
BLAST of mRNA_H-akashiwo_Contig1243.3.1 vs. uniprot
Match: A0A814LMI9_9BILA (Hypothetical protein n=1 Tax=Brachionus calyciflorus TaxID=104777 RepID=A0A814LMI9_9BILA)

HSP 1 Score: 125 bits (315), Expect = 4.610e-31
Identity = 60/131 (45.80%), Postives = 88/131 (67.18%), Query Frame = 0
Query:    3 DQLAGSWYFSSMDMLWAYWSIPLRETDRHKTAFTLRNKKYCWRVMCFGLTNAPATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFSTHLLNLEKIFKRMIAANLKFKLPKCLFGASQVPWLGHIITREG 133
            D L G+ YF+ +DM  +Y+ +PLRE D+ KTAF + NK Y W+VM  GLTNAPATFS L+N V  G  +   L +LDD++ +S + F+ +L +L +I  R+IAA LK K  KC F +++V +LG +++  G
Sbjct:  257 DSLGGAKYFTGLDMARSYFQVPLREEDKEKTAFCVNNKLYQWKVMPQGLTNAPATFSRLMNLVLNGLTHKHCLVYLDDLIIYS-RTFNENLAHLNEILDRLIAAGLKLKPGKCQFASNRVSYLGFVVSENG 386          
BLAST of mRNA_H-akashiwo_Contig1243.3.1 vs. uniprot
Match: A0A4Y2NDG8_ARAVE (Retrovirus-related Pol polyprotein from transposon 17.6 n=2 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2NDG8_ARAVE)

HSP 1 Score: 121 bits (303), Expect = 9.240e-31
Identity = 59/131 (45.04%), Postives = 84/131 (64.12%), Query Frame = 0
Query:    3 DQLAGSWYFSSMDMLWAYWSIPLRETDRHKTAFTLRNKKYCWRVMCFGLTNAPATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFSTHLLNLEKIFKRMIAANLKFKLPKCLFGASQVPWLGHIITREG 133
            D L GS +F+++D+   YW I +R  DR KTAFT     + ++VM FGL NAPATF  L+  V +G +++  L +LDD++   G+ F  HL NL K+F+R+  ANLK  L KC F   +V +LGH+I+ EG
Sbjct:   91 DALNGSQWFTTLDLKSGYWQIEIRPEDREKTAFTTGQGLWQFKVMPFGLCNAPATFERLMETVLRGLSSEACLVYLDDIII-VGRTFEEHLNNLRKVFQRLQKANLKLNLKKCRFFQKEVTYLGHVISAEG 220          
BLAST of mRNA_H-akashiwo_Contig1243.3.1 vs. uniprot
Match: A0A147BJ05_IXORI (RNA-directed DNA polymerase (Fragment) n=1 Tax=Ixodes ricinus TaxID=34613 RepID=A0A147BJ05_IXORI)

HSP 1 Score: 123 bits (308), Expect = 5.960e-30
Identity = 62/131 (47.33%), Postives = 80/131 (61.07%), Query Frame = 0
Query:    3 DQLAGSWYFSSMDMLWAYWSIPLRETDRHKTAFTLRNKKYCWRVMCFGLTNAPATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFSTHLLNLEKIFKRMIAANLKFKLPKCLFGASQVPWLGHIITREG 133
            D LAG  +FS++D+   YW +P+   DR KTAFT  +  Y +RVM FGL NAPATF  L+  V  G      L +LDD++   GK FS HL NLE++F R+  ANLK    KC     QV +LGHII+ +G
Sbjct:  246 DALAGCTWFSTLDLKSGYWQVPVHPGDREKTAFTTGSGSYQFRVMPFGLCNAPATFQRLMESVLNGLIGTICLVYLDDIVVF-GKTFSDHLANLERVFARLQHANLKLTPKKCSLFTRQVEYLGHIISADG 375          
BLAST of mRNA_H-akashiwo_Contig1243.3.1 vs. uniprot
Match: A0A4Y2AYY6_ARAVE (RNA-directed DNA polymerase (Fragment) n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2AYY6_ARAVE)

HSP 1 Score: 122 bits (307), Expect = 8.100e-30
Identity = 59/131 (45.04%), Postives = 85/131 (64.89%), Query Frame = 0
Query:    3 DQLAGSWYFSSMDMLWAYWSIPLRETDRHKTAFTLRNKKYCWRVMCFGLTNAPATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFSTHLLNLEKIFKRMIAANLKFKLPKCLFGASQVPWLGHIITREG 133
            D L GS +F+++D+   YW I +R  DR KTAFT     + ++VM FGL NAPATF  L+  V +G +++  L +LDD++   G+ F  HL NL K+F+R+  ANLK  L KC+F   +V +LGH+I+ EG
Sbjct:  276 DALNGSQWFTTLDLKSGYWQIEIRPEDREKTAFTTGQGLWQFKVMPFGLCNAPATFERLMETVLRGLSSEACLVYLDDIII-VGRTFEEHLNNLRKVFQRLQKANLKLNLKKCMFFQKEVTYLGHVISAEG 405          
BLAST of mRNA_H-akashiwo_Contig1243.3.1 vs. uniprot
Match: A0A4Y2TPI4_ARAVE (Retrovirus-related Pol polyprotein from transposon 297 n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2TPI4_ARAVE)

HSP 1 Score: 119 bits (297), Expect = 2.030e-29
Identity = 58/131 (44.27%), Postives = 84/131 (64.12%), Query Frame = 0
Query:    3 DQLAGSWYFSSMDMLWAYWSIPLRETDRHKTAFTLRNKKYCWRVMCFGLTNAPATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFSTHLLNLEKIFKRMIAANLKFKLPKCLFGASQVPWLGHIITREG 133
            D L GS +F+++D+   YW I +R  +R KTAFT     + ++VM FGL NAPATF  L+  V +G +++  L +LDD++   G+ F  HL NL K+F+R+  ANLK  L KC F   +V +LGH+I+ EG
Sbjct:   91 DALNGSQWFTTLDLKSGYWQIEIRPENREKTAFTTGQGLWQFKVMPFGLCNAPATFERLMETVLRGLSSEACLVYLDDIII-VGRTFEEHLNNLRKVFQRLQKANLKLNLKKCRFFHKEVTYLGHVISAEG 220          
BLAST of mRNA_H-akashiwo_Contig1243.3.1 vs. uniprot
Match: A0A4Y2PUC6_ARAVE (Retrovirus-related Pol polyprotein from transposon 297 n=5 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2PUC6_ARAVE)

HSP 1 Score: 114 bits (286), Expect = 2.210e-29
Identity = 55/131 (41.98%), Postives = 82/131 (62.60%), Query Frame = 0
Query:    3 DQLAGSWYFSSMDMLWAYWSIPLRETDRHKTAFTLRNKKYCWRVMCFGLTNAPATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFSTHLLNLEKIFKRMIAANLKFKLPKCLFGASQVPWLGHIITREG 133
            D L GS +FS++D+   YW + ++  D+ KTAFT     + ++VM FGL NAPATF  L+  V +G  ++  L +LDD++   G+ F  HL N+ K+F+R+  ANLK    KC F   +V +LGHII+ +G
Sbjct:   68 DALNGSQWFSTLDLKSGYWQVEIQPEDKEKTAFTTGQGLWQFKVMPFGLCNAPATFERLMETVLRGLTSEACLVYLDDIII-VGRTFQEHLNNIRKVFQRLQKANLKLSPKKCRFFRKEVSYLGHIISADG 197          
BLAST of mRNA_H-akashiwo_Contig1243.3.1 vs. uniprot
Match: A0A4Y2LUR4_ARAVE (RNA-directed DNA polymerase (Fragment) n=2 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2LUR4_ARAVE)

HSP 1 Score: 121 bits (303), Expect = 2.230e-29
Identity = 59/131 (45.04%), Postives = 84/131 (64.12%), Query Frame = 0
Query:    3 DQLAGSWYFSSMDMLWAYWSIPLRETDRHKTAFTLRNKKYCWRVMCFGLTNAPATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFSTHLLNLEKIFKRMIAANLKFKLPKCLFGASQVPWLGHIITREG 133
            D L GS +F+++D+   YW I +R  DR KTAFT     + ++VM FGL NAPATF  L+  V +G +++  L +LDD++   G+ F  HL NL K+F+R+  ANLK  L KC F   +V +LGH+I+ EG
Sbjct:   45 DALNGSQWFTTLDLKSGYWQIEIRPEDREKTAFTTGQGLWQFKVMPFGLCNAPATFERLMETVLRGLSSEACLVYLDDIII-VGRTFEEHLNNLRKVFQRLQKANLKLNLKKCRFFQKEVTYLGHVISAEG 174          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1243.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3XU57_HETAK1.770e-7278.20Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3XVA0_HETAK2.740e-6471.43Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A7S3XV63_HETAK9.520e-6371.43Hypothetical protein (Fragment) n=3 Tax=Heterosigm... [more]
A0A814LMI9_9BILA4.610e-3145.80Hypothetical protein n=1 Tax=Brachionus calyciflor... [more]
A0A4Y2NDG8_ARAVE9.240e-3145.04Retrovirus-related Pol polyprotein from transposon... [more]
A0A147BJ05_IXORI5.960e-3047.33RNA-directed DNA polymerase (Fragment) n=1 Tax=Ixo... [more]
A0A4Y2AYY6_ARAVE8.100e-3045.04RNA-directed DNA polymerase (Fragment) n=1 Tax=Ara... [more]
A0A4Y2TPI4_ARAVE2.030e-2944.27Retrovirus-related Pol polyprotein from transposon... [more]
A0A4Y2PUC6_ARAVE2.210e-2941.98Retrovirus-related Pol polyprotein from transposon... [more]
A0A4Y2LUR4_ARAVE2.230e-2945.04RNA-directed DNA polymerase (Fragment) n=2 Tax=Ara... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 4..129
e-value: 2.4E-18
score: 66.5
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 1..129
score: 10.003062
NoneNo IPR availableGENE3D3.10.10.10HIV Type 1 Reverse Transcriptase, subunit A, domain 1coord: 21..53
e-value: 1.4E-37
score: 131.1
NoneNo IPR availablePANTHERPTHR34072ENZYMATIC POLYPROTEIN-RELATEDcoord: 3..132
NoneNo IPR availableCDDcd01647RT_LTRcoord: 1..129
e-value: 1.84418E-49
score: 153.905
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 1..129
e-value: 1.4E-37
score: 131.1
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 2..133

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1243contigH-akashiwo_Contig1243:242438..242839 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1243.3.1mRNA_H-akashiwo_Contig1243.3.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig1243 242120..242884 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig1243.3.1 ID=prot_H-akashiwo_Contig1243.3.1|Name=mRNA_H-akashiwo_Contig1243.3.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=134bp
MFDQLAGSWYFSSMDMLWAYWSIPLRETDRHKTAFTLRNKKYCWRVMCFG
LTNAPATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFSTHLLNLEKIF
KRMIAANLKFKLPKCLFGASQVPWLGHIITREG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
IPR043128Rev_trsase/Diguanyl_cyclase
IPR043502DNA/RNA_pol_sf