prot_H-akashiwo_Contig1240.1.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig1240.1.1
Unique Nameprot_H-akashiwo_Contig1240.1.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length147
Homology
BLAST of mRNA_H-akashiwo_Contig1240.1.1 vs. uniprot
Match: A0A7S3Y8U8_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8U8_HETAK)

HSP 1 Score: 280 bits (716), Expect = 8.070e-92
Identity = 141/145 (97.24%), Postives = 142/145 (97.93%), Query Frame = 0
Query:    1 MQSYLSDRALFVVANGDSSSHMSIKSGVPQGAIWSPLLFDLFVRNVPQRVREALCLFYAADLTLQKDVDREEGVVQRAAEELNDDLQRLYEFGKEWLLEFEPTKSQELIITNSAENHKVTHPPLSMGGVIVEEKEQLEALGFTID 145
            MQSYLSDRALFVVANGDSSSHMSIKSGVPQGAIWSPLLFDLF+RNVPQRVREALCLFYA DLTLQKDVDREEG  QRAAEELNDDLQRLYEFGKEWLLEFEPTKSQELIITNSAENHKVTHPPLSMGGVIVEEKEQLEALGFTID
Sbjct:   34 MQSYLSDRALFVVANGDSSSHMSIKSGVPQGAIWSPLLFDLFIRNVPQRVREALCLFYADDLTLQKDVDREEGAAQRAAEELNDDLQRLYEFGKEWLLEFEPTKSQELIITNSAENHKVTHPPLSMGGVIVEEKEQLEALGFTID 178          
BLAST of mRNA_H-akashiwo_Contig1240.1.1 vs. uniprot
Match: A0A7S3Y8J9_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8J9_HETAK)

HSP 1 Score: 260 bits (664), Expect = 1.250e-85
Identity = 132/148 (89.19%), Postives = 138/148 (93.24%), Query Frame = 0
Query:    1 MQSYLSDRALFVVANGDSSSHMSIKSGVPQGAIWSPLLFDLFVRNVPQRVREALCLFYAADLTLQKDVDREEGVVQRAAEELNDDLQRLYEFGKEWLLEFEPTKSQELIITNSAENHKVTHPPLSMGG---VIVEEKEQLEALGFTID 145
            MQSYLSDRALFVVANGDSSSHMSIKSGVPQGAIWSPLLFDLF+RNVPQRVREALCLFYA DLTLQKDVDREEG  QRAAEELNDDLQRLYEFGKEWLLEFEPTKSQELIITN   ++KVTHPPL MGG   +++EEKEQLEALGFTID
Sbjct:   41 MQSYLSDRALFVVANGDSSSHMSIKSGVPQGAIWSPLLFDLFIRNVPQRVREALCLFYADDLTLQKDVDREEGAAQRAAEELNDDLQRLYEFGKEWLLEFEPTKSQELIITNLVADNKVTHPPLPMGGGVVMVIEEKEQLEALGFTID 188          
BLAST of mRNA_H-akashiwo_Contig1240.1.1 vs. uniprot
Match: A0A7S3Y8N4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8N4_HETAK)

HSP 1 Score: 184 bits (466), Expect = 2.180e-51
Identity = 100/145 (68.97%), Postives = 111/145 (76.55%), Query Frame = 0
Query:    2 QSYLSDRALFVVANGDSSSHMSIKSGVPQGAIWSPLLFDLFVRNVPQRVREALCLFYAADLTLQKDVDREEGVVQRAAEELNDDLQRLYEFGKEWLLEFEPTKSQELIITNS-AENHKVTHPPLSMGGVIVEEKEQLEALGFTID 145
            +SYLSDRALFVVANG  S  +SIKSGVPQGAIWSPLLFDLFVRNVPQRVREALCLFYA DLTL K +DR     Q A  ELN DL+RL+ FGKEWLLEFE TKS  L I+NS  ++ K  H P  MGG  V+E+E LE LGF +D
Sbjct:  487 ESYLSDRALFVVANGQISERVSIKSGVPQGAIWSPLLFDLFVRNVPQRVREALCLFYADDLTLLKVIDRNNKAAQDAQLELNQDLERLFRFGKEWLLEFEATKSFGLTISNSKGKDLKGRHIPCRMGGHEVKEQEVLEILGFLVD 631          
BLAST of mRNA_H-akashiwo_Contig1240.1.1 vs. uniprot
Match: A0A210QQ08_MIZYE (RNA-directed DNA polymerase from transposon BS n=1 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A210QQ08_MIZYE)

HSP 1 Score: 86.7 bits (213), Expect = 5.190e-17
Identity = 50/143 (34.97%), Postives = 87/143 (60.84%), Query Frame = 0
Query:    2 QSYLSDRALFVVANGDSSSHMSIKSGVPQGAIWSPLLFDLFVRNVPQRVREALCLFYAADLTLQKDVDREEGVVQRAAEELNDDLQRLYEFGKEWLLEFEPTKSQELIITNSAENHKVTHPPLSMGGVIVEEKEQLEALGFTI 144
            ++YLSDR   VV NG +S+ +++K+GVPQG+I  PLLF +++ ++ + ++  + LF A D +L   VD    + + +A+ LN DL + + + + WL+ F P+K++ L+I  S +  K  HPPL+M    + E    + LG  +
Sbjct:   90 ENYLSDRKQRVVINGKNSNWLNVKAGVPQGSILGPLLFLIYINDIVKDIQAKIKLF-ADDTSLYVTVD----IPRVSADILNSDLNKFHNWSQRWLVNFNPSKTETLLI--SRKTIKPFHPPLNMNNTNISEVATHKHLGIFL 225          
BLAST of mRNA_H-akashiwo_Contig1240.1.1 vs. uniprot
Match: A0A2H9T4U7_9ZZZZ (Reverse transcriptase domain-containing protein n=1 Tax=invertebrate metagenome TaxID=1711999 RepID=A0A2H9T4U7_9ZZZZ)

HSP 1 Score: 85.5 bits (210), Expect = 1.500e-16
Identity = 52/143 (36.36%), Postives = 84/143 (58.74%), Query Frame = 0
Query:    2 QSYLSDRALFVVANGDSSSHMSIKSGVPQGAIWSPLLFDLFVRNVPQRVREALCLFYAADLTLQKDVDREEGVVQRAAEELNDDLQRLYEFGKEWLLEFEPTKSQELIITNSAENHKVTHPPLSMGGVIVEEKEQLEALGFTI 144
            ++YL +R   VV  G  S+   IK+GVPQG+I  PLLF LF+ ++ + +R  + LF A D +L   +D      + +A +LN DL++++E+   WL+ F PTK++ L+I  S + +   HPPL M  +++ E      LG T+
Sbjct:  732 ENYLYNRKQRVVIKGKFSNWSEIKAGVPQGSILGPLLFLLFINDIVKDIRANIKLF-ADDTSLYVIIDSP----RISAVDLNFDLRKIHEWSVNWLVNFNPTKTETLLI--SKKTNSPIHPPLHMNNILLSEVSSHRHLGLTL 867          
BLAST of mRNA_H-akashiwo_Contig1240.1.1 vs. uniprot
Match: A0A0P4VTV9_SCYOL (Reverse transcriptase domain-containing protein n=1 Tax=Scylla olivacea TaxID=85551 RepID=A0A0P4VTV9_SCYOL)

HSP 1 Score: 84.3 bits (207), Expect = 3.610e-16
Identity = 48/142 (33.80%), Postives = 80/142 (56.34%), Query Frame = 0
Query:    4 YLSDRALFVVANGDSSSHMSIKSGVPQGAIWSPLLFDLFVRNVPQRVREALCLFYAADLTLQKDVDREEGVVQRAAEELNDDLQRLYEFGKEWLLEFEPTKSQELIITNSAENHKVTHPPLSMGGVIVEEKEQLEALGFTID 145
            YL  R L VV NG +S  + +++ VPQG++  P+L++++V ++ +++       YA D TL     R E V  RAAEE+N  L  + E+G  W + F P K+Q ++++ S          LS GG+ +E +E ++ LG  +D
Sbjct:  391 YLQGRTLQVVVNGQASESLPVRASVPQGSVLGPVLWNIYVDDLLRQLPAVSA--YADDCTLSCTYPRHESV--RAAEEINQQLGVIQEWGARWQVTFAPEKTQAMVVSRSPAAEPAVEGGLSFGGLPLELQESVKILGVEVD 528          
BLAST of mRNA_H-akashiwo_Contig1240.1.1 vs. uniprot
Match: A0A3D5S1K1_9BACT (Reverse transcriptase domain-containing protein n=1 Tax=Cytophagales bacterium TaxID=2053541 RepID=A0A3D5S1K1_9BACT)

HSP 1 Score: 80.1 bits (196), Expect = 1.120e-14
Identity = 48/146 (32.88%), Postives = 82/146 (56.16%), Query Frame = 0
Query:    1 MQSYLSDRALFVVANGDSSSHMSIKSGVPQGAIWSPLLFDLFVRNVPQRVREALCLFYAADLTLQKDVDREEGVVQRA--AEELNDDLQRLYEFGKEWLLEFEPTKSQELIITNSAENHKVTHPPLSMGGVIVEEKEQLEALGFTI 144
            ++S+LSDR + VV +G SS   S+ +GVPQG++  P LF +F+ ++P  +   L + YA D T+   ++    +  R   A EL  DL+ + E+G++WL+ F   K++ L +    E      P +SM G+ + E +  + LG T+
Sbjct:  632 IKSFLSDREIKVVLDGQSSKAYSVNAGVPQGSVLGPTLFLVFINDLPDNILSKLAI-YADDTTIYSPLESSVDLFDRVELAGELELDLRTVVEWGEKWLVSFNAAKTKLLSVNRFKEPFL---PSVSMNGLQLPESDHAKLLGLTL 773          
BLAST of mRNA_H-akashiwo_Contig1240.1.1 vs. uniprot
Match: A0A2H9T4Y5_9ZZZZ (Reverse transcriptase domain-containing protein n=1 Tax=invertebrate metagenome TaxID=1711999 RepID=A0A2H9T4Y5_9ZZZZ)

HSP 1 Score: 77.0 bits (188), Expect = 1.170e-13
Identity = 52/141 (36.88%), Postives = 77/141 (54.61%), Query Frame = 0
Query:    4 YLSDRALFVVANGDSSSHMSIKSGVPQGAIWSPLLFDLFVRNVPQRVREALCLFYAADLTLQKDVDREEGVVQRAAEELNDDLQRLYEFGKEWLLEFEPTKSQELIITNSAENHKVTHPPLSMGGVIVEEKEQLEALGFTI 144
            YL +R   VV NG  S+   I +GVPQG+I  PLLF +F+ ++   +  A+ LF A D +L   V+        +A  LND+L ++ E+ K WL+ F P+K+  L +T S + +K  HP L M   I+ E      LG T+
Sbjct:   38 YLRNRCQSVVINGKQSNLAYITAGVPQGSILGPLLFLIFINDIVNNISCAIKLF-ADDTSLYVIVESP----HLSANLLNDNLSKINEWSKTWLVNFNPSKT--LTMTVSKKTNKPIHPSLFMNNTILTEVTSHTHLGITL 171          
BLAST of mRNA_H-akashiwo_Contig1240.1.1 vs. uniprot
Match: A0A1W7R6F6_AEDAL (Putative reverse transcriptase (Fragment) n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A1W7R6F6_AEDAL)

HSP 1 Score: 76.3 bits (186), Expect = 2.470e-13
Identity = 51/148 (34.46%), Postives = 82/148 (55.41%), Query Frame = 0
Query:    1 MQSYLSDRALFVVANGDSSSHMSIKSGVPQGAIWSPLLFDLFVRNVPQRVREALCLFYAADLTLQKDVDREEGVVQRAAEELNDDLQRLYEFGKEWLLEFEPTKSQELIITNSAENHKVTHPPLSMGGVIVEEKEQLEALG--FTIDL 146
            ++SYL  R   V+ NG+ SS   I+SGVPQG+I  PLLF LF+ ++P  +       +A D+ +    DR+  + + A + +N DL+RL ++ K  LL   PTK++ ++I  S  + ++  P L +    +E   Q   LG  FT +L
Sbjct:  622 IKSYLIGRTQTVLHNGEFSSFAQIESGVPQGSILGPLLFSLFINDLPSVLEYCSVHLFADDVQIYLCSDRKYNITEMARK-INSDLRRLNDWSKRNLLIINPTKTKAMLINRSRSSPRI--PDLFLDDKKIEFVSQASNLGMLFTSNL 766          
BLAST of mRNA_H-akashiwo_Contig1240.1.1 vs. uniprot
Match: T2M4I6_HYDVU (Patched domain-containing protein 2 (Fragment) n=1 Tax=Hydra vulgaris TaxID=6087 RepID=T2M4I6_HYDVU)

HSP 1 Score: 75.9 bits (185), Expect = 3.420e-13
Identity = 47/146 (32.19%), Postives = 82/146 (56.16%), Query Frame = 0
Query:    1 MQSYLSDRALFVVANGDSSSHMSIKSGVPQGAIWSPLLFDLFVRNVPQRVREALCLFYAADLTLQKDVDREEGVVQRA--AEELNDDLQRLYEFGKEWLLEFEPTKSQELIITNSAENHKVTHPPLSMGGVIVEEKEQLEALGFTI 144
            ++S+LS+R + V+  G  SS   + SGVPQG+I  P+LF +++ ++P  +   + LF A D TL   +D++  +  R   A +L  DL  + ++G +WL+ F   K+Q L+  N+  N  + + P+ M G  + E   L  LG ++
Sbjct:  921 IKSFLSNRFIKVILEGQHSSLFPVTSGVPQGSILGPVLFLIYINDLPDNLSSKVALF-ADDSTLYSCLDKKSSLFDRLEQAADLESDLTSVIDWGSQWLVNFNSKKTQ-LLTANNYRN--MVNIPILMNGNPLTELSSLRLLGLSV 1062          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1240.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3Y8U8_HETAK8.070e-9297.24Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S3Y8J9_HETAK1.250e-8589.19Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A7S3Y8N4_HETAK2.180e-5168.97Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A210QQ08_MIZYE5.190e-1734.97RNA-directed DNA polymerase from transposon BS n=1... [more]
A0A2H9T4U7_9ZZZZ1.500e-1636.36Reverse transcriptase domain-containing protein n=... [more]
A0A0P4VTV9_SCYOL3.610e-1633.80Reverse transcriptase domain-containing protein n=... [more]
A0A3D5S1K1_9BACT1.120e-1432.88Reverse transcriptase domain-containing protein n=... [more]
A0A2H9T4Y5_9ZZZZ1.170e-1336.88Reverse transcriptase domain-containing protein n=... [more]
A0A1W7R6F6_AEDAL2.470e-1334.46Putative reverse transcriptase (Fragment) n=1 Tax=... [more]
T2M4I6_HYDVU3.420e-1332.19Patched domain-containing protein 2 (Fragment) n=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 2..144
e-value: 1.7E-15
score: 57.2
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 1..144
score: 12.565437
NoneNo IPR availablePANTHERPTHR33332:SF23SUBFAMILY NOT NAMEDcoord: 2..145
NoneNo IPR availablePANTHERPTHR33332FAMILY NOT NAMEDcoord: 2..145

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1240contigH-akashiwo_Contig1240:73631..74071 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1240.1.1mRNA_H-akashiwo_Contig1240.1.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig1240 73427..74293 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig1240.1.1 ID=prot_H-akashiwo_Contig1240.1.1|Name=mRNA_H-akashiwo_Contig1240.1.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=147bp
MQSYLSDRALFVVANGDSSSHMSIKSGVPQGAIWSPLLFDLFVRNVPQRV
REALCLFYAADLTLQKDVDREEGVVQRAAEELNDDLQRLYEFGKEWLLEF
EPTKSQELIITNSAENHKVTHPPLSMGGVIVEEKEQLEALGFTIDL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom