mRNA_H-akashiwo_Contig1240.1.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1240.1.1 vs. uniprot
Match: A0A7S3Y8U8_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8U8_HETAK) HSP 1 Score: 483 bits (1242), Expect = 3.240e-169 Identity = 244/254 (96.06%), Postives = 247/254 (97.24%), Query Frame = 1
Query: 106 VALDFKDAFDKVWWRGLLAHLWVVGVRSKAFKLMQSYLSDRALFVVANGDSSSHMSIKSGVPQGAIWSPLLFDLFVRNVPQRVREALCLFYAADLTLQKDVDREEGVVQRAAEELNDDLQRLYEFGKEWLLEFEPTKSQELIITNSAENHKVTHPPLSMGGVIVEEKEQLEALGFTIDL*GNWSLHAEAVAKEARKRLGAIRRIAHMLDDRAKMMAYKAFVQSKIEYGNLIYWGAAEGYLKKLDRVQSSAVSML 867
VALDFK AFDKVWWRGLLAHLW VGVRSKAFKLMQSYLSDRALFVVANGDSSSHMSIKSGVPQGAIWSPLLFDLF+RNVPQRVREALCLFYA DLTLQKDVDREEG QRAAEELNDDLQRLYEFGKEWLLEFEPTKSQELIITNSAENHKVTHPPLSMGGVIVEEKEQLEALGFTID GNWSLHAEAVAKEARKRLGAIRRIAHMLDDRAKMMAYKAFV+SKIEYGNLIYWGAAEGYL+KLDRVQSSAVSML
Sbjct: 1 VALDFKGAFDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSSHMSIKSGVPQGAIWSPLLFDLFIRNVPQRVREALCLFYADDLTLQKDVDREEGAAQRAAEELNDDLQRLYEFGKEWLLEFEPTKSQELIITNSAENHKVTHPPLSMGGVIVEEKEQLEALGFTIDPRGNWSLHAEAVAKEARKRLGAIRRIAHMLDDRAKMMAYKAFVRSKIEYGNLIYWGAAEGYLEKLDRVQSSAVSML 254
BLAST of mRNA_H-akashiwo_Contig1240.1.1 vs. uniprot
Match: A0A7S3Y8J9_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8J9_HETAK) HSP 1 Score: 470 bits (1210), Expect = 2.810e-166 Identity = 240/264 (90.91%), Postives = 248/264 (93.94%), Query Frame = 1
Query: 85 ARKDVRLVALDFKDAFDKVWWRGLLAHLWVVGVRSKAFKLMQSYLSDRALFVVANGDSSSHMSIKSGVPQGAIWSPLLFDLFVRNVPQRVREALCLFYAADLTLQKDVDREEGVVQRAAEELNDDLQRLYEFGKEWLLEFEPTKSQELIITNSAENHKVTHPPLSMGG---VIVEEKEQLEALGFTIDL*GNWSLHAEAVAKEARKRLGAIRRIAHMLDDRAKMMAYKAFVQSKIEYGNLIYWGAAEGYLKKLDRVQSSAVSML 867
ARKDVRLV LDFK A DKVWWRGLLAHLW VGVRSKAFKLMQSYLSDRALFVVANGDSSSHMSIKSGVPQGAIWSPLLFDLF+RNVPQRVREALCLFYA DLTLQKDVDREEG QRAAEELNDDLQRLYEFGKEWLLEFEPTKSQELIITN ++KVTHPPL MGG +++EEKEQLEALGFTID GNWSLHAEAVAKEARKRLGAIRRIAHMLDDRAKMMAYKAFV+SKIEYGNLIYWGAAEGYL+KLDRVQSSAVSML
Sbjct: 1 ARKDVRLVELDFKGACDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSSHMSIKSGVPQGAIWSPLLFDLFIRNVPQRVREALCLFYADDLTLQKDVDREEGAAQRAAEELNDDLQRLYEFGKEWLLEFEPTKSQELIITNLVADNKVTHPPLPMGGGVVMVIEEKEQLEALGFTIDPRGNWSLHAEAVAKEARKRLGAIRRIAHMLDDRAKMMAYKAFVRSKIEYGNLIYWGAAEGYLEKLDRVQSSAVSML 264
BLAST of mRNA_H-akashiwo_Contig1240.1.1 vs. uniprot
Match: A0A7S3Y8N4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8N4_HETAK) HSP 1 Score: 387 bits (995), Expect = 2.800e-126 Identity = 202/289 (69.90%), Postives = 231/289 (79.93%), Query Frame = 1
Query: 4 NQFGFLHGTGTVDVGVILADRISLALEARKDVRLVALDFKDAFDKVWWRGLLAHLWVVGVRSKAFKLMQSYLSDRALFVVANGDSSSHMSIKSGVPQGAIWSPLLFDLFVRNVPQRVREALCLFYAADLTLQKDVDREEGVVQRAAEELNDDLQRLYEFGKEWLLEFEPTKSQELIITNS-AENHKVTHPPLSMGGVIVEEKEQLEALGFTIDL*GNWSLHAEAVAKEARKRLGAIRRIAHMLDDRAKMMAYKAFVQSKIEYGNLIYWGAAEGYLKKLDRVQSSAVSML 867
NQFGFL TGT+DVGVILAD+IS ALEARKDVRLVALDF+ AFDKVWWRGLLAHLW VGVRSKA++L +SYLSDRALFVVANG S +SIKSGVPQGAIWSPLLFDLFVRNVPQRVREALCLFYA DLTL K +DR Q A ELN DL+RL+ FGKEWLLEFE TKS L I+NS ++ K H P MGG V+E+E LE LGF +D GNWS AEA A AR+RLGA+RR+A +LDD M YK FV+SKIEYG+L+YWGAA+G+L+ LD +Q SA+ +L
Sbjct: 419 NQFGFLPDTGTLDVGVILADQISRALEARKDVRLVALDFQGAFDKVWWRGLLAHLWAVGVRSKAYQLFESYLSDRALFVVANGQISERVSIKSGVPQGAIWSPLLFDLFVRNVPQRVREALCLFYADDLTLLKVIDRNNKAAQDAQLELNQDLERLFRFGKEWLLEFEATKSFGLTISNSKGKDLKGRHIPCRMGGHEVKEQEVLEILGFLVDNKGNWSKFAEATASAARQRLGALRRLAPLLDDDCINMVYKTFVRSKIEYGSLVYWGAADGHLRDLDAIQRSALKLL 707
BLAST of mRNA_H-akashiwo_Contig1240.1.1 vs. uniprot
Match: A0A7S3Y8Z6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8Z6_HETAK) HSP 1 Score: 181 bits (460), Expect = 3.840e-49 Identity = 116/236 (49.15%), Postives = 144/236 (61.02%), Query Frame = 1
Query: 4 NQFGFLHGTGTVDVGVILADRISLALEARKDVRLVALDFKDAFDKVWWRGLLAHLWVVGVRSKAFKLMQSYLSDRALFVVANGD----SSSHMSIKSGVPQGAIWSPLLFDLFVRNVPQRVREALCLFYAADLTLQ-KDVDREEGVVQRAAEELNDDLQRLYEFGKEWLLEFEPTKSQELIITNSAENHKVTHPPLSMGGVIVEEKEQLEALGF-TIDL*GNWSLHAEAVAKEARK 693
NQFGFL TGT+DVGVILAD+IS ALEARKDVRLVALDF+ AFDKVWWRGLLAHLW VGVRSKA++L +SYL + + G+ +S I+ + PL FVRNV QRVR+ALCLFY DLTL K + R Q +L+ DL+RL+ FGKEWLLE E + L +G V+E++ LE LGF + G WS +++ A AR+
Sbjct: 419 NQFGFLPDTGTLDVGVILADQISRALEARKDVRLVALDFQGAFDKVWWRGLLAHLWAVGVRSKAYQLFESYLVGQG--PLRGGEWADLRASQHQIRCATGSYLVPPPL----FVRNVRQRVRKALCLFYVNDLTLLLKVIGRNNEAAQNVQWDLSQDLKRLFCFGKEWLLELEAS--------------------LGIGEHEVKEQKVLEILGFFNENNKGTWSQFSKSTATAARE 628
BLAST of mRNA_H-akashiwo_Contig1240.1.1 vs. uniprot
Match: A0A0P4VTV9_SCYOL (Reverse transcriptase domain-containing protein n=1 Tax=Scylla olivacea TaxID=85551 RepID=A0A0P4VTV9_SCYOL) HSP 1 Score: 166 bits (421), Expect = 3.320e-43 Identity = 96/287 (33.45%), Postives = 161/287 (56.10%), Query Frame = 1
Query: 7 QFGFLHGTGTVDVGVILADRISLALEARKDVRLVALDFKDAFDKVWWRGLLAHLWVVGVRSKAFKLMQSYLSDRALFVVANGDSSSHMSIKSGVPQGAIWSPLLFDLFVRNVPQRVREALCLFYAADLTLQKDVDREEGVVQRAAEELNDDLQRLYEFGKEWLLEFEPTKSQELIITNSAENHKVTHPPLSMGGVIVEEKEQLEALGFTIDL*GNWSLHAEAVAKEARKRLGAIRRIAHMLDDRAKMMAYKAFVQSKIEYGNLIYWGAAEGYLKKLDRVQSSAVSML 867
QFGF G T D+ ++L AL+ D +VALD AFD+VW GLL L G++ +L+ YL R L VV NG +S + +++ VPQG++ P+L++++V ++ +++ YA D TL R E V RAAEE+N L + E+G W + F P K+Q ++++ S LS GG+ +E +E ++ LG +D + H + +A +A R+ ++RR+A++LD R +++ YKA ++ +EY L + A ++ KLD +Q A+ ++
Sbjct: 322 QFGFRPGRSTSDLLMLLTGGWQDALDGGLDSVVVALDIAGAFDRVWHGGLLEKLRAKGIQGDLLQLLGDYLQGRTLQVVVNGQASESLPVRASVPQGSVLGPVLWNIYVDDLLRQLPAVSA--YADDCTLSCTYPRHESV--RAAEEINQQLGVIQEWGARWQVTFAPEKTQAMVVSRSPAAEPAVEGGLSFGGLPLELQESVKILGVEVDRGLRFDRHVKHIALKASHRVSSLRRVANLLDRRGRLLLYKAQIRPYLEYAALSWMSCAATHISKLDGIQRRALRLV 604
BLAST of mRNA_H-akashiwo_Contig1240.1.1 vs. uniprot
Match: A0A3D5S1K1_9BACT (Reverse transcriptase domain-containing protein n=1 Tax=Cytophagales bacterium TaxID=2053541 RepID=A0A3D5S1K1_9BACT) HSP 1 Score: 161 bits (407), Expect = 5.710e-41 Identity = 95/282 (33.69%), Postives = 157/282 (55.67%), Query Frame = 1
Query: 7 QFGFLHGTGTVDVGVILADRISLALEARKDVRLVALDFKDAFDKVWWRGLLAHLWVVGVRSKAFKLMQSYLSDRALFVVANGDSSSHMSIKSGVPQGAIWSPLLFDLFVRNVPQRVREALCLFYAADLTLQKDVDREEGVVQRA--AEELNDDLQRLYEFGKEWLLEFEPTKSQELIITNSAENHKVTHPPLSMGGVIVEEKEQLEALGFTIDL*GNWSLHAEAVAKEARKRLGAIRRIAHMLDDRAKMMAYKAFVQSKIEYGNLIYWGAAEGYLKKLDRVQ 846
Q+GF G T D+ ++ +RI +L A + R VALD AFDKVW GL+ L GV+ F +++S+LSDR + VV +G SS S+ +GVPQG++ P LF +F+ ++P + L + YA D T+ ++ + R A EL DL+ + E+G++WL+ F K++ L + E P +SM G+ + E + + LG T+ +W+ + E +A+ A +++G++ R L + + YKA ++ +EY I+ GA+ L LDR+Q
Sbjct: 566 QYGFRSGRSTADILTVINERIYRSLNASGETRAVALDISKAFDKVWHAGLMLKLTGYGVQGSLFDIIKSFLSDREIKVVLDGQSSKAYSVNAGVPQGSVLGPTLFLVFINDLPDNILSKLAI-YADDTTIYSPLESSVDLFDRVELAGELELDLRTVVEWGEKWLVSFNAAKTKLLSVNRFKEPFL---PSVSMNGLQLPESDHAKLLGLTLTNTFSWNQYIEDIARAAARKVGSLYRARGYLSEESIFYLYKATIRPCMEYCCHIWAGASRESLNLLDRIQ 843
BLAST of mRNA_H-akashiwo_Contig1240.1.1 vs. uniprot
Match: A0A2H9T4U7_9ZZZZ (Reverse transcriptase domain-containing protein n=1 Tax=invertebrate metagenome TaxID=1711999 RepID=A0A2H9T4U7_9ZZZZ) HSP 1 Score: 156 bits (394), Expect = 3.350e-39 Identity = 93/289 (32.18%), Postives = 153/289 (52.94%), Query Frame = 1
Query: 1 PNQFGFLHGTGTVDVGVILADRISLALEARKDVRLVALDFKDAFDKVWWRGLLAHLWVVGVRSKAFKLMQSYLSDRALFVVANGDSSSHMSIKSGVPQGAIWSPLLFDLFVRNVPQRVREALCLFYAADLTLQKDVDREEGVVQRAAEELNDDLQRLYEFGKEWLLEFEPTKSQELIITNSAENHKVTHPPLSMGGVIVEEKEQLEALGFTIDL*GNWSLHAEAVAKEARKRLGAIRRIAHMLDDRAKMMAYKAFVQSKIEYGNLIYWGAAEGYLKKLDRVQSSAVSML 867
P+Q GF HG V+ + + I AL+ K++R+V D AFD+VW +GLL+ L G+R K ++YL +R VV G S+ IK+GVPQG+I PLLF LF+ ++ + +R + LF A D +L +D + +A +LN DL++++E+ WL+ F PTK++ L+I S + + HPPL M +++ E LG T+ G W+ H + + +L +RR L + Y ++ EYGN+++ + L+ +Q A ++
Sbjct: 663 PHQSGFRHGDSPVNQLLAITHDIYSALDHGKEIRMVFCDISKAFDRVWHKGLLSKLSGFGIRGSLLKWFENYLYNRKQRVVIKGKFSNWSEIKAGVPQGSILGPLLFLLFINDIVKDIRANIKLF-ADDTSLYVIIDSP----RISAVDLNFDLRKIHEWSVNWLVNFNPTKTETLLI--SKKTNSPIHPPLHMNNILLSEVSSHRHLGLTLSNNGGWTDHINLIISKVSPKLNILRRFKFTLGRTSLQTLYFTLIRPIFEYGNIVWDNLTKTQSDMLENLQLEAARIV 944
BLAST of mRNA_H-akashiwo_Contig1240.1.1 vs. uniprot
Match: T2M4I6_HYDVU (Patched domain-containing protein 2 (Fragment) n=1 Tax=Hydra vulgaris TaxID=6087 RepID=T2M4I6_HYDVU) HSP 1 Score: 154 bits (390), Expect = 1.140e-38 Identity = 93/290 (32.07%), Postives = 158/290 (54.48%), Query Frame = 1
Query: 4 NQFGFLHGTGTVDVGVILADRISLALEARKDVRLVALDFKDAFDKVWWRGLLAHLWVVGVRSKAFKLMQSYLSDRALFVVANGDSSSHMSIKSGVPQGAIWSPLLFDLFVRNVPQRVREALCLFYAADLTLQKDVDREEGVVQRA--AEELNDDLQRLYEFGKEWLLEFEPTKSQELIITNSAENHKVTHPPLSMGGVIVEEKEQLEALGFTIDL*GNWSLHAEAVAKEARKRLGAIRRIAHMLDDRAKMMAYKAFVQSKIEYGNLIYWGAAEGYLKKLDRVQSSAVSML 867
NQ+GF T D+ + +R AL+ + R +ALD AFDKVW GLL L GV K F+ ++S+LS+R + V+ G SS + SGVPQG+I P+LF +++ ++P + + LF A D TL +D++ + R A +L DL + ++G +WL+ F K+Q L+ N+ N + + P+ M G + E L LG ++ +W + +++AK A ++ ++ R H L + + YK+ ++ +EY I+ G++ L LD+VQ V+++
Sbjct: 854 NQYGFRSSRSTADLLTAVTERFYRALDGGSEARAIALDISKAFDKVWHAGLLHKLASYGVSGKVFESIKSFLSNRFIKVILEGQHSSLFPVTSGVPQGSILGPVLFLIYINDLPDNLSSKVALF-ADDSTLYSCLDKKSSLFDRLEQAADLESDLTSVIDWGSQWLVNFNSKKTQ-LLTANNYRN--MVNIPILMNGNPLTELSSLRLLGLSVTTDLSWKPYIQSIAKLASAKVASLYRARHFLTSDSILYLYKSLIRPCMEYCCHIWAGSSNDSLSLLDKVQKRIVNVV 1139
BLAST of mRNA_H-akashiwo_Contig1240.1.1 vs. uniprot
Match: A0A210QQ08_MIZYE (RNA-directed DNA polymerase from transposon BS n=1 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A210QQ08_MIZYE) HSP 1 Score: 151 bits (382), Expect = 1.370e-38 Identity = 87/289 (30.10%), Postives = 159/289 (55.02%), Query Frame = 1
Query: 1 PNQFGFLHGTGTVDVGVILADRISLALEARKDVRLVALDFKDAFDKVWWRGLLAHLWVVGVRSKAFKLMQSYLSDRALFVVANGDSSSHMSIKSGVPQGAIWSPLLFDLFVRNVPQRVREALCLFYAADLTLQKDVDREEGVVQRAAEELNDDLQRLYEFGKEWLLEFEPTKSQELIITNSAENHKVTHPPLSMGGVIVEEKEQLEALGFTIDL*GNWSLHAEAVAKEARKRLGAIRRIAHMLDDRAKMMAYKAFVQSKIEYGNLIYWGAAEGYLKKLDRVQSSAVSML 867
P+Q GF HG + + + I LAL+ K++R+V D AFD+VW +GLL L G+R+ ++YLSDR VV NG +S+ +++K+GVPQG+I PLLF +++ ++ + ++ + LF A D +L VD + + +A+ LN DL + + + + WL+ F P+K++ L+I S + K HPPL+M + E + LG + G+W+ H + + ++ +R+ LD + Y ++ ++YG++++ + + L+ +Q A ++
Sbjct: 21 PHQSGFRHGDSPSNQLLAIIHDIYLALDNGKEIRMVFCDISKAFDRVWHKGLLCKLSSYGIRNSLLVWFENYLSDRKQRVVINGKNSNWLNVKAGVPQGSILGPLLFLIYINDIVKDIQAKIKLF-ADDTSLYVTVD----IPRVSADILNSDLNKFHNWSQRWLVNFNPSKTETLLI--SRKTIKPFHPPLNMNNTNISEVATHKHLGIFLSGNGHWNEHISYLISKISPKINILRKFKFSLDRYSLQTMYYTLIRPILDYGDILWDCLTKAQSELLENLQLEAARIV 302
BLAST of mRNA_H-akashiwo_Contig1240.1.1 vs. uniprot
Match: A0A2H9T4Y5_9ZZZZ (Reverse transcriptase domain-containing protein n=1 Tax=invertebrate metagenome TaxID=1711999 RepID=A0A2H9T4Y5_9ZZZZ) HSP 1 Score: 141 bits (355), Expect = 4.640e-35 Identity = 84/255 (32.94%), Postives = 137/255 (53.73%), Query Frame = 1
Query: 103 LVALDFKDAFDKVWWRGLLAHLWVVGVRSKAFKLMQSYLSDRALFVVANGDSSSHMSIKSGVPQGAIWSPLLFDLFVRNVPQRVREALCLFYAADLTLQKDVDREEGVVQRAAEELNDDLQRLYEFGKEWLLEFEPTKSQELIITNSAENHKVTHPPLSMGGVIVEEKEQLEALGFTIDL*GNWSLHAEAVAKEARKRLGAIRRIAHMLDDRAKMMAYKAFVQSKIEYGNLIYWGAAEGYLKKLDRVQSSAVSML 867
++ D AFD+VW RGLL+ L G+ F +YL +R VV NG S+ I +GVPQG+I PLLF +F+ ++ + A+ LF A D +L V+ +A LND+L ++ E+ K WL+ F P+K+ L +T S + +K HP L M I+ E LG T+ GNW+ H + + +A K+L +R + +D ++ Y +F++ +EYG++++ G K L+ +Q A ++
Sbjct: 1 MIFCDISKAFDRVWHRGLLSKLKSFGITGNLFLWFSNYLRNRCQSVVINGKQSNLAYITAGVPQGSILGPLLFLIFINDIVNNISCAIKLF-ADDTSLYVIVESP----HLSANLLNDNLSKINEWSKTWLVNFNPSKT--LTMTVSKKTNKPIHPSLFMNNTILTEVTSHTHLGITLSANGNWTDHLQHIISKASKKLAVLRNLKFSIDRKSLQTLYCSFIRPLLEYGDIVWDNITLGQSKLLESIQLEAARII 248 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1240.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1240.1.1 >prot_H-akashiwo_Contig1240.1.1 ID=prot_H-akashiwo_Contig1240.1.1|Name=mRNA_H-akashiwo_Contig1240.1.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=147bp MQSYLSDRALFVVANGDSSSHMSIKSGVPQGAIWSPLLFDLFVRNVPQRVback to top mRNA from alignment at H-akashiwo_Contig1240:73427..74293+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1240.1.1 ID=mRNA_H-akashiwo_Contig1240.1.1|Name=mRNA_H-akashiwo_Contig1240.1.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=867bp|location=Sequence derived from alignment at H-akashiwo_Contig1240:73427..74293+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1240:73427..74293+ >mRNA_H-akashiwo_Contig1240.1.1 ID=mRNA_H-akashiwo_Contig1240.1.1|Name=mRNA_H-akashiwo_Contig1240.1.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=441bp|location=Sequence derived from alignment at H-akashiwo_Contig1240:73427..74293+ (Heterosigma akashiwo CCMP452)back to top |