prot_H-akashiwo_Contig1215.2.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig1215.2.1
Unique Nameprot_H-akashiwo_Contig1215.2.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length85
Homology
BLAST of mRNA_H-akashiwo_Contig1215.2.1 vs. uniprot
Match: D7FRW0_ECTSI (Glycine cleavage system P protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRW0_ECTSI)

HSP 1 Score: 93.2 bits (230), Expect = 2.930e-20
Identity = 47/80 (58.75%), Postives = 59/80 (73.75%), Query Frame = 0
Query:    5 LLSTKADIFAPKDTFTRRHLGPRVHDTAVMLQTIGINSLEELCDQTVPKQIRLKRDLQLEPPMSETEALAAIRKMADKNQ 84
            L +T  DIFA KDTF RRH+GP   D  VM++T+G+ SL++L D+TVP  IRL   L LE  +SE+EAL AIRK+ADKNQ
Sbjct:   31 LSATADDIFAAKDTFARRHIGPSDADVEVMMKTVGVKSLDDLVDRTVPHSIRLDEPLDLEDALSESEALTAIRKIADKNQ 110          
BLAST of mRNA_H-akashiwo_Contig1215.2.1 vs. uniprot
Match: A0A835ZCN8_9STRA (Glycine cleavage system P protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCN8_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 7.960e-18
Identity = 43/84 (51.19%), Postives = 62/84 (73.81%), Query Frame = 0
Query:    3 SRLLSTKA--DIFAPKDTFTRRHLGPRVHDTAVMLQTIGINSLEELCDQTVPKQIRLKRDLQLEPPMSETEALAAIRKMADKNQ 84
            +R +S+ A   +FAP DTF RRH+GP   DT  M++ +G++SL++L D+TVP  IRL + L L+ P+SE+EALA +R +ADKNQ
Sbjct:   34 NRAMSSAAVDKVFAPCDTFARRHIGPSEADTKEMMKVVGVSSLDDLVDKTVPAAIRLSKPLTLDAPLSESEALAKLRAIADKNQ 117          
BLAST of mRNA_H-akashiwo_Contig1215.2.1 vs. uniprot
Match: A0A7S2JSH8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JSH8_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 1.830e-16
Identity = 41/77 (53.25%), Postives = 54/77 (70.13%), Query Frame = 0
Query:    8 TKADIFAPKDTFTRRHLGPRVHDTAVMLQTIGINSLEELCDQTVPKQI-RLKRDLQLEPPMSETEALAAIRKMADKN 83
            T AD+    DTF+RRHLGPR  D   ML++IG  + ++L   TVP  I R  ++++L+P MSE+EAL AIRKMADKN
Sbjct:   29 TSADVLDRVDTFSRRHLGPREEDAKNMLKSIGFENFDQLVKSTVPANILRDDKEMKLQPAMSESEALQAIRKMADKN 105          
BLAST of mRNA_H-akashiwo_Contig1215.2.1 vs. uniprot
Match: A0A418B3G5_9STRA (Glycine dehydrogenase (aminomethyl-transferring) (Fragment) n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418B3G5_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 2.900e-16
Identity = 43/81 (53.09%), Postives = 58/81 (71.60%), Query Frame = 0
Query:    3 SRLLSTKADIFAPKDTFTRRHLGPRVHDTAVMLQTIGINSLEELCDQTVPKQIRLKRDLQLEPPMSETEALAAIRKMADKN 83
            SR+ ST AD +   D F RRH+G    DTAVML+ IG+NS+EEL  +TVP +IRL + L L  PMSE++A AA++K+A +N
Sbjct:   19 SRVFST-ADTYRLTDQFARRHIGAGEEDTAVMLKKIGLNSIEELIHKTVPSEIRLTKPLDLPAPMSESQAYAALKKIASRN 98          
BLAST of mRNA_H-akashiwo_Contig1215.2.1 vs. uniprot
Match: A0A7C2KTZ3_9BACT (Glycine dehydrogenase (decarboxylating) n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A7C2KTZ3_9BACT)

HSP 1 Score: 81.6 bits (200), Expect = 3.340e-16
Identity = 38/73 (52.05%), Postives = 52/73 (71.23%), Query Frame = 0
Query:   11 DIFAPKDTFTRRHLGPRVHDTAVMLQTIGINSLEELCDQTVPKQIRLKRDLQLEPPMSETEALAAIRKMADKN 83
            D+    D F  RH+GPR HD A ML+ +G  +L+EL DQT+P  IRL+  L+L+PP SE EALAA+R++A +N
Sbjct:   10 DVLQASDAFVDRHIGPRDHDIAQMLEVVGCRTLDELTDQTIPADIRLREPLRLDPPRSEHEALAALREIARQN 82          
BLAST of mRNA_H-akashiwo_Contig1215.2.1 vs. uniprot
Match: A0A024UEU7_9STRA (Glycine cleavage system P protein n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024UEU7_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 3.340e-16
Identity = 43/81 (53.09%), Postives = 58/81 (71.60%), Query Frame = 0
Query:    3 SRLLSTKADIFAPKDTFTRRHLGPRVHDTAVMLQTIGINSLEELCDQTVPKQIRLKRDLQLEPPMSETEALAAIRKMADKN 83
            SR+ ST AD +   D F RRH+G    DTAVML+ IG+NS+EEL  +TVP +IRL + L L  PMSE++A AA++K+A +N
Sbjct:   21 SRVFST-ADTYRLTDQFARRHIGAGEEDTAVMLKKIGLNSIEELIHKTVPSEIRLTKPLDLPAPMSESQAYAALKKIASRN 100          
BLAST of mRNA_H-akashiwo_Contig1215.2.1 vs. uniprot
Match: A0A1V9YDI8_9STRA (Glycine cleavage system P protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YDI8_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 6.240e-16
Identity = 43/80 (53.75%), Postives = 53/80 (66.25%), Query Frame = 0
Query:    4 RLLSTKADIFAPKDTFTRRHLGPRVHDTAVMLQTIGINSLEELCDQTVPKQIRLKRDLQLEPPMSETEALAAIRKMADKN 83
            R  S   D +   D F RRH+G    DTA MLQTIG  SLE L  +TVPK+IRLK+ L L  PMSE++A+A +RK+A KN
Sbjct:   19 RAFSAAKDPYRLTDQFARRHIGASEDDTAFMLQTIGEKSLESLIKKTVPKEIRLKKKLNLPAPMSESQAMAKLRKIAKKN 98          
BLAST of mRNA_H-akashiwo_Contig1215.2.1 vs. uniprot
Match: K0QZL5_THAOC (Glycine cleavage system P protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0QZL5_THAOC)

HSP 1 Score: 80.5 bits (197), Expect = 8.520e-16
Identity = 42/74 (56.76%), Postives = 50/74 (67.57%), Query Frame = 0
Query:   10 ADIFAPKDTFTRRHLGPRVHDTAVMLQTIGINSLEELCDQTVPKQIRLKRDLQLEPPMSETEALAAIRKMADKN 83
            AD     DTF+RRHLGP   DT VMLQ+IG +S E L + TVP  I   ++L LEP +SETEAL  I+ MADKN
Sbjct:   40 ADALDMADTFSRRHLGPAEEDTKVMLQSIGFDSFESLVNSTVPANILSGKELNLEPALSETEALKRIKSMADKN 113          
BLAST of mRNA_H-akashiwo_Contig1215.2.1 vs. uniprot
Match: A0A090X3U2_NONUL (Glycine dehydrogenase n=1 Tax=Nonlabens ulvanivorans TaxID=906888 RepID=A0A090X3U2_NONUL)

HSP 1 Score: 75.1 bits (183), Expect = 1.370e-15
Identity = 37/67 (55.22%), Postives = 50/67 (74.63%), Query Frame = 0
Query:   17 DTFTRRHLGPRVHDTAVMLQTIGINSLEELCDQTVPKQIRLKRDLQLEPPMSETEALAAIRKMADKN 83
            D F  RH+GPR  D A ML+TIG+ S+++L  +TVP+ IRLK+DLQL+  MSE E L+ I+K+ DKN
Sbjct:    4 DRFALRHIGPRKADLAPMLETIGVESIDQLVYETVPENIRLKQDLQLDTAMSEYEFLSHIKKLGDKN 70          
BLAST of mRNA_H-akashiwo_Contig1215.2.1 vs. uniprot
Match: A0A3A0AN79_9CHLR (Glycine dehydrogenase (decarboxylating) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3A0AN79_9CHLR)

HSP 1 Score: 79.7 bits (195), Expect = 1.590e-15
Identity = 41/77 (53.25%), Postives = 53/77 (68.83%), Query Frame = 0
Query:    8 TKADIFAPKDTFTRRHLGPRVHDTAVMLQTIGINSLEELCDQTVPKQIRLKRDLQLEPPMSETEALAAIRKMADKNQ 84
            + A++  P D F  RHLGPR  D A ML+TIG+NSL+EL +QTVP  IR+K  L L  P SE+E LA +R +A +NQ
Sbjct:   25 SNAELLQPLDQFAPRHLGPRPADVAEMLRTIGVNSLDELINQTVPAPIRMKTPLHLPGPRSESEVLADLRDLARQNQ 101          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1215.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRW0_ECTSI2.930e-2058.75Glycine cleavage system P protein n=1 Tax=Ectocarp... [more]
A0A835ZCN8_9STRA7.960e-1851.19Glycine cleavage system P protein n=1 Tax=Tribonem... [more]
A0A7S2JSH8_9STRA1.830e-1653.25Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A418B3G5_9STRA2.900e-1653.09Glycine dehydrogenase (aminomethyl-transferring) (... [more]
A0A7C2KTZ3_9BACT3.340e-1652.05Glycine dehydrogenase (decarboxylating) n=1 Tax=Ph... [more]
A0A024UEU7_9STRA3.340e-1653.09Glycine cleavage system P protein n=3 Tax=Aphanomy... [more]
A0A1V9YDI8_9STRA6.240e-1653.75Glycine cleavage system P protein n=1 Tax=Achlya h... [more]
K0QZL5_THAOC8.520e-1656.76Glycine cleavage system P protein n=1 Tax=Thalassi... [more]
A0A090X3U2_NONUL1.370e-1555.22Glycine dehydrogenase n=1 Tax=Nonlabens ulvanivora... [more]
A0A3A0AN79_9CHLR1.590e-1553.25Glycine dehydrogenase (decarboxylating) n=1 Tax=Ch... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020581Glycine cleavage system P proteinPFAMPF02347GDC-Pcoord: 21..84
e-value: 3.5E-15
score: 55.8
IPR020581Glycine cleavage system P proteinPANTHERPTHR11773GLYCINE DEHYDROGENASE, DECARBOXYLATINGcoord: 16..84
NoneNo IPR availablePANTHERPTHR11773:SF1GLYCINE DEHYDROGENASE (DECARBOXYLATING), MITOCHONDRIALcoord: 16..84
IPR015424Pyridoxal phosphate-dependent transferaseSUPERFAMILY53383PLP-dependent transferasescoord: 22..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1215contigH-akashiwo_Contig1215:62880..63585 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1215.2.1mRNA_H-akashiwo_Contig1215.2.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig1215 62880..63585 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig1215.2.1 ID=prot_H-akashiwo_Contig1215.2.1|Name=mRNA_H-akashiwo_Contig1215.2.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=85bp
MGSRLLSTKADIFAPKDTFTRRHLGPRVHDTAVMLQTIGINSLEELCDQT
VPKQIRLKRDLQLEPPMSETEALAAIRKMADKNQA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020581GDC_P
IPR015424PyrdxlP-dep_Trfase