mRNA_H-akashiwo_Contig1215.2.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1215.2.1 vs. uniprot
Match: D7FRW0_ECTSI (Glycine cleavage system P protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRW0_ECTSI) HSP 1 Score: 93.2 bits (230), Expect = 2.930e-20 Identity = 47/80 (58.75%), Postives = 59/80 (73.75%), Query Frame = 1
Query: 13 LLSTKADIFAPKDTFTRRHLGPRVHDTAVMLQTIGINSLEELCDQTVPKQIRLKRDLQLEPPMSETEALAAIRKMADKNQ 252
L +T DIFA KDTF RRH+GP D VM++T+G+ SL++L D+TVP IRL L LE +SE+EAL AIRK+ADKNQ
Sbjct: 31 LSATADDIFAAKDTFARRHIGPSDADVEVMMKTVGVKSLDDLVDRTVPHSIRLDEPLDLEDALSESEALTAIRKIADKNQ 110
BLAST of mRNA_H-akashiwo_Contig1215.2.1 vs. uniprot
Match: A0A835ZCN8_9STRA (Glycine cleavage system P protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCN8_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 7.960e-18 Identity = 43/84 (51.19%), Postives = 62/84 (73.81%), Query Frame = 1
Query: 7 SRLLSTKA--DIFAPKDTFTRRHLGPRVHDTAVMLQTIGINSLEELCDQTVPKQIRLKRDLQLEPPMSETEALAAIRKMADKNQ 252
+R +S+ A +FAP DTF RRH+GP DT M++ +G++SL++L D+TVP IRL + L L+ P+SE+EALA +R +ADKNQ
Sbjct: 34 NRAMSSAAVDKVFAPCDTFARRHIGPSEADTKEMMKVVGVSSLDDLVDKTVPAAIRLSKPLTLDAPLSESEALAKLRAIADKNQ 117
BLAST of mRNA_H-akashiwo_Contig1215.2.1 vs. uniprot
Match: A0A7S2JSH8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JSH8_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 1.830e-16 Identity = 41/77 (53.25%), Postives = 54/77 (70.13%), Query Frame = 1
Query: 22 TKADIFAPKDTFTRRHLGPRVHDTAVMLQTIGINSLEELCDQTVPKQI-RLKRDLQLEPPMSETEALAAIRKMADKN 249
T AD+ DTF+RRHLGPR D ML++IG + ++L TVP I R ++++L+P MSE+EAL AIRKMADKN
Sbjct: 29 TSADVLDRVDTFSRRHLGPREEDAKNMLKSIGFENFDQLVKSTVPANILRDDKEMKLQPAMSESEALQAIRKMADKN 105
BLAST of mRNA_H-akashiwo_Contig1215.2.1 vs. uniprot
Match: A0A418B3G5_9STRA (Glycine dehydrogenase (aminomethyl-transferring) (Fragment) n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418B3G5_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 2.900e-16 Identity = 43/81 (53.09%), Postives = 58/81 (71.60%), Query Frame = 1
Query: 7 SRLLSTKADIFAPKDTFTRRHLGPRVHDTAVMLQTIGINSLEELCDQTVPKQIRLKRDLQLEPPMSETEALAAIRKMADKN 249
SR+ ST AD + D F RRH+G DTAVML+ IG+NS+EEL +TVP +IRL + L L PMSE++A AA++K+A +N
Sbjct: 19 SRVFST-ADTYRLTDQFARRHIGAGEEDTAVMLKKIGLNSIEELIHKTVPSEIRLTKPLDLPAPMSESQAYAALKKIASRN 98
BLAST of mRNA_H-akashiwo_Contig1215.2.1 vs. uniprot
Match: A0A7C2KTZ3_9BACT (Glycine dehydrogenase (decarboxylating) n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A7C2KTZ3_9BACT) HSP 1 Score: 81.6 bits (200), Expect = 3.340e-16 Identity = 38/73 (52.05%), Postives = 52/73 (71.23%), Query Frame = 1
Query: 31 DIFAPKDTFTRRHLGPRVHDTAVMLQTIGINSLEELCDQTVPKQIRLKRDLQLEPPMSETEALAAIRKMADKN 249
D+ D F RH+GPR HD A ML+ +G +L+EL DQT+P IRL+ L+L+PP SE EALAA+R++A +N
Sbjct: 10 DVLQASDAFVDRHIGPRDHDIAQMLEVVGCRTLDELTDQTIPADIRLREPLRLDPPRSEHEALAALREIARQN 82
BLAST of mRNA_H-akashiwo_Contig1215.2.1 vs. uniprot
Match: A0A024UEU7_9STRA (Glycine cleavage system P protein n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024UEU7_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 3.340e-16 Identity = 43/81 (53.09%), Postives = 58/81 (71.60%), Query Frame = 1
Query: 7 SRLLSTKADIFAPKDTFTRRHLGPRVHDTAVMLQTIGINSLEELCDQTVPKQIRLKRDLQLEPPMSETEALAAIRKMADKN 249
SR+ ST AD + D F RRH+G DTAVML+ IG+NS+EEL +TVP +IRL + L L PMSE++A AA++K+A +N
Sbjct: 21 SRVFST-ADTYRLTDQFARRHIGAGEEDTAVMLKKIGLNSIEELIHKTVPSEIRLTKPLDLPAPMSESQAYAALKKIASRN 100
BLAST of mRNA_H-akashiwo_Contig1215.2.1 vs. uniprot
Match: A0A1V9YDI8_9STRA (Glycine cleavage system P protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YDI8_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 6.240e-16 Identity = 43/80 (53.75%), Postives = 53/80 (66.25%), Query Frame = 1
Query: 10 RLLSTKADIFAPKDTFTRRHLGPRVHDTAVMLQTIGINSLEELCDQTVPKQIRLKRDLQLEPPMSETEALAAIRKMADKN 249
R S D + D F RRH+G DTA MLQTIG SLE L +TVPK+IRLK+ L L PMSE++A+A +RK+A KN
Sbjct: 19 RAFSAAKDPYRLTDQFARRHIGASEDDTAFMLQTIGEKSLESLIKKTVPKEIRLKKKLNLPAPMSESQAMAKLRKIAKKN 98
BLAST of mRNA_H-akashiwo_Contig1215.2.1 vs. uniprot
Match: K0QZL5_THAOC (Glycine cleavage system P protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0QZL5_THAOC) HSP 1 Score: 80.5 bits (197), Expect = 8.520e-16 Identity = 42/74 (56.76%), Postives = 50/74 (67.57%), Query Frame = 1
Query: 28 ADIFAPKDTFTRRHLGPRVHDTAVMLQTIGINSLEELCDQTVPKQIRLKRDLQLEPPMSETEALAAIRKMADKN 249
AD DTF+RRHLGP DT VMLQ+IG +S E L + TVP I ++L LEP +SETEAL I+ MADKN
Sbjct: 40 ADALDMADTFSRRHLGPAEEDTKVMLQSIGFDSFESLVNSTVPANILSGKELNLEPALSETEALKRIKSMADKN 113
BLAST of mRNA_H-akashiwo_Contig1215.2.1 vs. uniprot
Match: A0A090X3U2_NONUL (Glycine dehydrogenase n=1 Tax=Nonlabens ulvanivorans TaxID=906888 RepID=A0A090X3U2_NONUL) HSP 1 Score: 75.1 bits (183), Expect = 1.370e-15 Identity = 37/67 (55.22%), Postives = 50/67 (74.63%), Query Frame = 1
Query: 49 DTFTRRHLGPRVHDTAVMLQTIGINSLEELCDQTVPKQIRLKRDLQLEPPMSETEALAAIRKMADKN 249
D F RH+GPR D A ML+TIG+ S+++L +TVP+ IRLK+DLQL+ MSE E L+ I+K+ DKN
Sbjct: 4 DRFALRHIGPRKADLAPMLETIGVESIDQLVYETVPENIRLKQDLQLDTAMSEYEFLSHIKKLGDKN 70
BLAST of mRNA_H-akashiwo_Contig1215.2.1 vs. uniprot
Match: A0A3A0AN79_9CHLR (Glycine dehydrogenase (decarboxylating) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3A0AN79_9CHLR) HSP 1 Score: 79.7 bits (195), Expect = 1.590e-15 Identity = 41/77 (53.25%), Postives = 53/77 (68.83%), Query Frame = 1
Query: 22 TKADIFAPKDTFTRRHLGPRVHDTAVMLQTIGINSLEELCDQTVPKQIRLKRDLQLEPPMSETEALAAIRKMADKNQ 252
+ A++ P D F RHLGPR D A ML+TIG+NSL+EL +QTVP IR+K L L P SE+E LA +R +A +NQ
Sbjct: 25 SNAELLQPLDQFAPRHLGPRPADVAEMLRTIGVNSLDELINQTVPAPIRMKTPLHLPGPRSESEVLADLRDLARQNQ 101 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1215.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1215.2.1 >prot_H-akashiwo_Contig1215.2.1 ID=prot_H-akashiwo_Contig1215.2.1|Name=mRNA_H-akashiwo_Contig1215.2.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=85bp MGSRLLSTKADIFAPKDTFTRRHLGPRVHDTAVMLQTIGINSLEELCDQTback to top mRNA from alignment at H-akashiwo_Contig1215:62880..63585+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1215.2.1 ID=mRNA_H-akashiwo_Contig1215.2.1|Name=mRNA_H-akashiwo_Contig1215.2.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=706bp|location=Sequence derived from alignment at H-akashiwo_Contig1215:62880..63585+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1215:62880..63585+ >mRNA_H-akashiwo_Contig1215.2.1 ID=mRNA_H-akashiwo_Contig1215.2.1|Name=mRNA_H-akashiwo_Contig1215.2.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=255bp|location=Sequence derived from alignment at H-akashiwo_Contig1215:62880..63585+ (Heterosigma akashiwo CCMP452)back to top |