prot_H-akashiwo_Contig1208.9.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig1208.9.1
Unique Nameprot_H-akashiwo_Contig1208.9.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length180
Homology
BLAST of mRNA_H-akashiwo_Contig1208.9.1 vs. uniprot
Match: A0A7S3YEJ2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YEJ2_HETAK)

HSP 1 Score: 269 bits (687), Expect = 2.200e-87
Identity = 136/137 (99.27%), Postives = 136/137 (99.27%), Query Frame = 0
Query:   44 RAFSVSKIGKTKKNVQRNLDKAQQKEYAPLVDRTEDIPPPVCVVVMGPPGCGKSSLIRSLVKLYTRQNLTEITGPITIVCNKKRRLTLFECTNDLSAMVDLAKIADLVLLMVDASYGFEMETFEFLNILQVHGFPKA 180
            RAFSVSKIGKTKKNVQRNLDKAQQKEYAPLVDRTEDIPPPVCVVVMGPPGCGKSSLIRSLVKLYTRQNLTEITGPITIVCNKKRRLTLFECTNDLSAMVDLAKIADLVLLMVDASYGFEMETFEFLNILQVHGFPK 
Sbjct:    1 RAFSVSKIGKTKKNVQRNLDKAQQKEYAPLVDRTEDIPPPVCVVVMGPPGCGKSSLIRSLVKLYTRQNLTEITGPITIVCNKKRRLTLFECTNDLSAMVDLAKIADLVLLMVDASYGFEMETFEFLNILQVHGFPKV 137          
BLAST of mRNA_H-akashiwo_Contig1208.9.1 vs. uniprot
Match: W7TXR8_9STRA (Ribosome biogenesis protein bms1-like protein (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TXR8_9STRA)

HSP 1 Score: 235 bits (600), Expect = 1.450e-75
Identity = 122/176 (69.32%), Postives = 144/176 (81.82%), Query Frame = 0
Query:    6 ITKSVKKAHRAKKSGAKADKKRDHQKKKTGQSTARHNPRAFSVSKIGKTKKNVQRNLDKAQQKEYAPLVDRTEDIPPPVCVVVMGPPGCGKSSLIRSLVKLYTRQNLTEITGPITIVCNKKRRLTLFECT-NDLSAMVDLAKIADLVLLMVDASYGFEMETFEFLNILQVHGFPKA 180
            + + V K HR +++GAKA KK  HQKKK G ST RHNPRAFSV+ I +T++N QRNLD+AQQKE+ PLVDRTE +PPP  VVVMGP GCGKS+LIRSLVK YTRQNL+++ GPIT+V  K +RLT FEC  +DL AM+DLAK ADLVLLMVD S+GFEMETFEFLN+LQ HGFPK 
Sbjct:    6 LVQDVHKGHRPRQAGAKAKKKEAHQKKKKGLSTERHNPRAFSVANIKRTQRNTQRNLDRAQQKEHVPLVDRTEALPPPSLVVVMGPKGCGKSTLIRSLVKYYTRQNLSDVLGPITVVAGKAKRLTFFECPGDDLCAMLDLAKTADLVLLMVDGSFGFEMETFEFLNMLQTHGFPKV 181          
BLAST of mRNA_H-akashiwo_Contig1208.9.1 vs. uniprot
Match: I2CPB3_NANGC (Ribosome biogenesis protein BMS1 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPB3_NANGC)

HSP 1 Score: 235 bits (600), Expect = 2.500e-73
Identity = 122/176 (69.32%), Postives = 144/176 (81.82%), Query Frame = 0
Query:    6 ITKSVKKAHRAKKSGAKADKKRDHQKKKTGQSTARHNPRAFSVSKIGKTKKNVQRNLDKAQQKEYAPLVDRTEDIPPPVCVVVMGPPGCGKSSLIRSLVKLYTRQNLTEITGPITIVCNKKRRLTLFECT-NDLSAMVDLAKIADLVLLMVDASYGFEMETFEFLNILQVHGFPKA 180
            + + V K HR +++GAKA KK  HQKKK G ST RHNPRAFSV+ I +T++N QRNLD+AQQKE+ PLVDRTE +PPP  VVVMGP GCGKS+LIRSLVK YTRQNL+++ GPIT+V  K +RLT FEC  +DL AM+DLAK ADLVLLMVD S+GFEMETFEFLN+LQ HGFPK 
Sbjct:    6 LVQDVHKGHRPRQAGAKAKKKEAHQKKKKGLSTERHNPRAFSVANIKRTQRNTQRNLDRAQQKEHVPLVDRTEALPPPSLVVVMGPKGCGKSTLIRSLVKYYTRQNLSDVLGPITVVAGKAKRLTFFECPGDDLCAMLDLAKTADLVLLMVDGSFGFEMETFEFLNMLQTHGFPKV 181          
BLAST of mRNA_H-akashiwo_Contig1208.9.1 vs. uniprot
Match: A0A6H5L2C7_9PHAE (Bms1-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2C7_9PHAE)

HSP 1 Score: 230 bits (587), Expect = 9.290e-67
Identity = 122/179 (68.16%), Postives = 141/179 (78.77%), Query Frame = 0
Query:    2 EALNITKSVKKAHRAKKSGAKADKKRDHQKKKTGQSTARHNPRAFSVSKIGKTKKNVQRNLDKAQQKEYAPLVDRTEDIPPPVCVVVMGPPGCGKSSLIRSLVKLYTRQNLTEITGPITIVCNKKRRLTLFECTNDLSAMVDLAKIADLVLLMVDASYGFEMETFEFLNILQVHGFPKA 180
            +AL++TK  KK HR  KSGAKA+KK     K+ G    RHNPRAFSVSKIGKT+K  QRNLD+AQ+KE  P VDR E++PPPV VVVMGP G GK++LIRSL+KLYT  NL E TGPIT+V  K RR+T  EC +DL  MVDLAK+ADLVLL+VD S+GFEMETFEFLNILQVHGFPK 
Sbjct:    3 DALSLTKDAKKPHRTSKSGAKANKK-----KEKGGKVERHNPRAFSVSKIGKTRKTQQRNLDRAQRKEVVPQVDRAEEVPPPVMVVVMGPRGSGKTTLIRSLIKLYTGHNLKESTGPITVVSGKNRRITFQECPDDLCGMVDLAKVADLVLLVVDGSFGFEMETFEFLNILQVHGFPKV 176          
BLAST of mRNA_H-akashiwo_Contig1208.9.1 vs. uniprot
Match: A0A1V9ZFU4_9STRA (Ribosome biogenesis protein BMS1 (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZFU4_9STRA)

HSP 1 Score: 219 bits (557), Expect = 2.110e-66
Identity = 108/141 (76.60%), Postives = 121/141 (85.82%), Query Frame = 0
Query:   40 RHNPRAFSVSKIGKTKKNVQRNLDKAQQKEYAPLVDRTEDIPPPVCVVVMGPPGCGKSSLIRSLVKLYTRQNLTEITGPITIVCNKKRRLTLFECTNDLSAMVDLAKIADLVLLMVDASYGFEMETFEFLNILQVHGFPKA 180
            ++NP+AF VSKIGK K+  QRNLDKA QKEY PLVDRTED PPP+ VVVMGPPG GKS+LIRSLVK YTR N+ EI GPIT++  K RR+T FEC NDL+AM+DLAKIADLVLLMVDAS+GFEMETFEFLNILQV GFPK 
Sbjct:   37 KNNPKAFGVSKIGKAKRMTQRNLDKAHQKEYVPLVDRTEDTPPPITVVVMGPPGSGKSTLIRSLVKRYTRHNIGEIKGPITVISGKDRRITFFECPNDLNAMIDLAKIADLVLLMVDASFGFEMETFEFLNILQVSGFPKV 177          
BLAST of mRNA_H-akashiwo_Contig1208.9.1 vs. uniprot
Match: A0A067C0E8_SAPPC (Bms1-type G domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C0E8_SAPPC)

HSP 1 Score: 223 bits (569), Expect = 5.280e-65
Identity = 118/170 (69.41%), Postives = 136/170 (80.00%), Query Frame = 0
Query:   12 KAHRAKKSGAKADKKRDHQKKKTGQS-TARHNPRAFSVSKIGKTKKNVQRNLDKAQQKEYAPLVDRTEDIPPPVCVVVMGPPGCGKSSLIRSLVKLYTRQNLTEITGPITIVCNKKRRLTLFECTNDLSAMVDLAKIADLVLLMVDASYGFEMETFEFLNILQVHGFPKA 180
            K HR   SGAK +KK+ +  +K  Q+  A++NP+AF VSKIGK K+  QRNLDKA QKEY P VDR ED PPPV VVVMGPPG GKS+LIRSLVK YTR N+ EI GP+T++  K RR+T FEC NDL+AM+DLAKIADLVLLMVDAS+GFEMETFEFLNILQV GFPK 
Sbjct:   11 KQHRKSTSGAKVNKKKRNDAQKNEQAKNAKNNPKAFGVSKIGKAKRMTQRNLDKAHQKEYVPQVDRMEDTPPPVSVVVMGPPGSGKSTLIRSLVKRYTRHNIGEIKGPVTVISGKDRRITFFECPNDLNAMIDLAKIADLVLLMVDASFGFEMETFEFLNILQVSGFPKV 180          
BLAST of mRNA_H-akashiwo_Contig1208.9.1 vs. uniprot
Match: A0A1V9Z1F2_9STRA (Ribosome biogenesis protein BMS1 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z1F2_9STRA)

HSP 1 Score: 225 bits (573), Expect = 5.810e-65
Identity = 119/170 (70.00%), Postives = 136/170 (80.00%), Query Frame = 0
Query:   12 KAHRAKKSGAKADKKRDHQKKKTGQS-TARHNPRAFSVSKIGKTKKNVQRNLDKAQQKEYAPLVDRTEDIPPPVCVVVMGPPGCGKSSLIRSLVKLYTRQNLTEITGPITIVCNKKRRLTLFECTNDLSAMVDLAKIADLVLLMVDASYGFEMETFEFLNILQVHGFPKA 180
            K HR  KSGAK +KK+    +K  Q+  A++NP+AF VSKIGK K+  QRNLDKA QKEY P VDR ED PPPV VVVMGPPG GKS+LIRSLVK YTR N+ EI GP+T++  K RR+T FEC NDL+AM+DLAKIADLVLLMVDAS+GFEMETFEFLNILQV GFPK 
Sbjct:   11 KQHRKSKSGAKVNKKKRSDAQKNEQAKNAKNNPKAFGVSKIGKAKRMTQRNLDKAHQKEYVPQVDRMEDTPPPVSVVVMGPPGSGKSTLIRSLVKRYTRHNIGEIKGPVTVISGKDRRITFFECPNDLNAMIDLAKIADLVLLMVDASFGFEMETFEFLNILQVSGFPKV 180          
BLAST of mRNA_H-akashiwo_Contig1208.9.1 vs. uniprot
Match: A0A6A5ABJ1_9STRA (Bms1-type G domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5ABJ1_9STRA)

HSP 1 Score: 219 bits (559), Expect = 6.000e-65
Identity = 115/171 (67.25%), Postives = 132/171 (77.19%), Query Frame = 0
Query:   12 KAHRAKKSGAKADKKRDHQKKK--TGQSTARHNPRAFSVSKIGKTKKNVQRNLDKAQQKEYAPLVDRTEDIPPPVCVVVMGPPGCGKSSLIRSLVKLYTRQNLTEITGPITIVCNKKRRLTLFECTNDLSAMVDLAKIADLVLLMVDASYGFEMETFEFLNILQVHGFPKA 180
            K HR  KSGAK +KK              A+HNP+AF V+KIG+ K+ +QRNLDKA QKEY P V+R ED PPP CVVVMGPPG GKS+LIRSLVK YTR N+ +I GPIT++  K +R+T FEC NDL+AMVDLAKIADLVLLMVDAS+GFEMETFEFLNILQV GFPK 
Sbjct:   13 KDHRKSKSGAKVNKKXXXXXXXXAAADKNAKHNPKAFGVAKIGRAKRTIQRNLDKAHQKEYVPNVNRVEDTPPPTCVVVMGPPGSGKSTLIRSLVKRYTRHNIGDIKGPITVIAGKDKRITFFECPNDLNAMVDLAKIADLVLLMVDASFGFEMETFEFLNILQVAGFPKV 183          
BLAST of mRNA_H-akashiwo_Contig1208.9.1 vs. uniprot
Match: W4G4A1_9STRA (Bms1-type G domain-containing protein n=11 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G4A1_9STRA)

HSP 1 Score: 223 bits (569), Expect = 2.080e-64
Identity = 115/171 (67.25%), Postives = 136/171 (79.53%), Query Frame = 0
Query:   12 KAHRAKKSGAKADKKRDHQKKK--TGQSTARHNPRAFSVSKIGKTKKNVQRNLDKAQQKEYAPLVDRTEDIPPPVCVVVMGPPGCGKSSLIRSLVKLYTRQNLTEITGPITIVCNKKRRLTLFECTNDLSAMVDLAKIADLVLLMVDASYGFEMETFEFLNILQVHGFPKA 180
            K HR  KSGAK +KK+   +++       A+HNP+AF V+KIG+ K+ +QRNLDKA QKEY P V+R ED PPP CVVVMGPPG GKS+LIRSLVK YTR N+ +I GPIT++  K +R+T FEC NDL+AMVDLAKIADLVLLMVDAS+GFEMETFEFLNILQV GFPK 
Sbjct:   11 KDHRKSKSGAKVNKKKKKNQEQLAAADKNAKHNPKAFGVAKIGRAKRTIQRNLDKAHQKEYVPNVNRVEDTPPPTCVVVMGPPGSGKSTLIRSLVKRYTRHNIGDIKGPITVIAGKDKRITFFECPNDLNAMVDLAKIADLVLLMVDASFGFEMETFEFLNILQVAGFPKV 181          
BLAST of mRNA_H-akashiwo_Contig1208.9.1 vs. uniprot
Match: T0Q4Q6_SAPDV (Bms1-type G domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0Q4Q6_SAPDV)

HSP 1 Score: 223 bits (569), Expect = 2.140e-64
Identity = 118/170 (69.41%), Postives = 136/170 (80.00%), Query Frame = 0
Query:   12 KAHRAKKSGAKADKKRDHQKKKTGQS-TARHNPRAFSVSKIGKTKKNVQRNLDKAQQKEYAPLVDRTEDIPPPVCVVVMGPPGCGKSSLIRSLVKLYTRQNLTEITGPITIVCNKKRRLTLFECTNDLSAMVDLAKIADLVLLMVDASYGFEMETFEFLNILQVHGFPKA 180
            K HR   SGAK +KK+ +  +K  Q+  A++NP+AF VSKIGK K+  QRNLDKA QKEY P VDR ED PPPV VVVMGPPG GKS+LIRSLVK YTR N+ EI GP+T++  K RR+T FEC NDL+AM+DLAKIADLVLLMVDAS+GFEMETFEFLNILQV GFPK 
Sbjct:   11 KQHRKSTSGAKVNKKKRNDAQKNEQAKNAKNNPKAFGVSKIGKAKRMTQRNLDKAHQKEYVPQVDRMEDTPPPVSVVVMGPPGSGKSTLIRSLVKRYTRHNIGEIKGPVTVISGKDRRITFFECPNDLNAMIDLAKIADLVLLMVDASFGFEMETFEFLNILQVSGFPKV 180          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1208.9.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3YEJ2_HETAK2.200e-8799.27Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
W7TXR8_9STRA1.450e-7569.32Ribosome biogenesis protein bms1-like protein (Fra... [more]
I2CPB3_NANGC2.500e-7369.32Ribosome biogenesis protein BMS1 (Fragment) n=1 Ta... [more]
A0A6H5L2C7_9PHAE9.290e-6768.16Bms1-type G domain-containing protein n=2 Tax=Ecto... [more]
A0A1V9ZFU4_9STRA2.110e-6676.60Ribosome biogenesis protein BMS1 (Fragment) n=1 Ta... [more]
A0A067C0E8_SAPPC5.280e-6569.41Bms1-type G domain-containing protein n=1 Tax=Sapr... [more]
A0A1V9Z1F2_9STRA5.810e-6570.00Ribosome biogenesis protein BMS1 n=1 Tax=Achlya hy... [more]
A0A6A5ABJ1_9STRA6.000e-6567.25Bms1-type G domain-containing protein (Fragment) n... [more]
W4G4A1_9STRA2.080e-6467.25Bms1-type G domain-containing protein n=11 Tax=Aph... [more]
T0Q4Q6_SAPDV2.140e-6469.41Bms1-type G domain-containing protein n=1 Tax=Sapr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 48..68
NoneNo IPR availablePIRSRPIRSR001174-2PIRSR001174-2coord: 68..110
e-value: 0.0016
score: 14.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 10..38
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..46
NoneNo IPR availablePANTHERPTHR12858:SF2RIBOSOME BIOGENESIS PROTEIN BMS1 HOMOLOGcoord: 10..179
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 66..179
e-value: 7.0E-9
score: 37.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 79..178
IPR039761Ribosome biogenesis protein Bms1/Tsr1PANTHERPTHR12858RIBOSOME BIOGENESIS PROTEINcoord: 10..179

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1208contigH-akashiwo_Contig1208:302252..303314 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1208.9.1mRNA_H-akashiwo_Contig1208.9.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig1208 302252..303314 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig1208.9.1 ID=prot_H-akashiwo_Contig1208.9.1|Name=mRNA_H-akashiwo_Contig1208.9.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=180bp
MEALNITKSVKKAHRAKKSGAKADKKRDHQKKKTGQSTARHNPRAFSVSK
IGKTKKNVQRNLDKAQQKEYAPLVDRTEDIPPPVCVVVMGPPGCGKSSLI
RSLVKLYTRQNLTEITGPITIVCNKKRRLTLFECTNDLSAMVDLAKIADL
VLLMVDASYGFEMETFEFLNILQVHGFPKA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR039761Bms1/Tsr1