prot_H-akashiwo_Contig1202.7.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig1202.7.1
Unique Nameprot_H-akashiwo_Contig1202.7.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length58
Homology
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BLAST of mRNA_H-akashiwo_Contig1202.7.1 vs. uniprot
Match: A0A4D9D862_9STRA (COX6C domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D862_9STRA)

HSP 1 Score: 47.8 bits (112), Expect = 1.160e-5
Identity = 20/40 (50.00%), Postives = 28/40 (70.00%), Query Frame = 0 
Query:    8 KALGMLWREAAIGTGLGIVGGFIWKFSVTTPTDNQIKKFY 47
             A+ +L REA IGTGLG+VGG +WK ++  PT+   K +Y
Sbjct:    2 SAVKVLIREAMIGTGLGVVGGVVWKVAIAAPTNRTYKTYY 41
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1202.7.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A4D9D862_9STRA1.160e-550.00COX6C domain-containing protein n=1 Tax=Nannochlor... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1202contigH-akashiwo_Contig1202:204661..204834 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1202.7.1mRNA_H-akashiwo_Contig1202.7.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig1202 204382..204997 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig1202.7.1 ID=prot_H-akashiwo_Contig1202.7.1|Name=mRNA_H-akashiwo_Contig1202.7.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=58bp
MAPPAGSKALGMLWREAAIGTGLGIVGGFIWKFSVTTPTDNQIKKFYLKQ
EEAKAEK*
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