prot_H-akashiwo_Contig1202.10.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig1202.10.1
Unique Nameprot_H-akashiwo_Contig1202.10.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length171
Homology
BLAST of mRNA_H-akashiwo_Contig1202.10.1 vs. uniprot
Match: W7TX20_9STRA (Light-harvesting protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TX20_9STRA)

HSP 1 Score: 172 bits (437), Expect = 1.210e-51
Identity = 90/151 (59.60%), Postives = 113/151 (74.83%), Query Frame = 0
Query:   21 KSKSLPFLTKPEKLDGSMVGDVGFDPLRITDQLTDLNFVRAAELKHGRVAMLAVVGFAIASKVNLYGDAAAISTPLDAPFMVPFAGNMQILSFIGIIELATLDSTYAGEGAPGDYGWDPLNFSKGKTPEQMKDLQLKELKNGRLAMWAILG 171
            +SK+LPFL  P+KLDGS+VGD GFDP+ I+DQ+ +L +VRAAELKHGRVAML  +G+ +   V+L G+  A S PL A   VP   ++QI  FI  IELATLD TY  +  P D G+DP+N SKGK+ +QMKDL+LKELKNGRLAM AI+G
Sbjct:   37 QSKALPFLAAPKKLDGSLVGDFGFDPMGISDQVANLKYVRAAELKHGRVAMLGFLGWVVTQFVHLPGEIYAESNPLKAIAAVPLISHVQIFLFIAAIELATLDRTYTAD-KPWDLGFDPMNMSKGKSEQQMKDLELKELKNGRLAMIAIIG 186          
BLAST of mRNA_H-akashiwo_Contig1202.10.1 vs. uniprot
Match: F0YKY4_AURAN (Putative plastid light harvesting protein isoform 10 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YKY4_AURAN)

HSP 1 Score: 160 bits (404), Expect = 1.760e-46
Identity = 89/179 (49.72%), Postives = 114/179 (63.69%), Query Frame = 0
Query:   11 TKPMT---TMMAEKSKSLPFLTKPEKLDG---------------SMVGDVGFDPLRITDQLTDLNFVRAAELKHGRVAMLAVVGFAIASKVNLYGDAAAISTPLDAPFMVPFAGNMQILSFIGIIELATLDSTYAGEGAPGDYGWDPLNFSKGKTPEQMKDLQLKELKNGRLAMWAILG 171
            TKPM    ++ AE S++ PFL +PEKLDG               +M+GDVGFDPLR+ +   DL++ R AE+KHGR+AMLA VGF +   V+L G+A   S PL AP+ VP+A N QIL   G +ELAT D TY     P D G+DPL F +GK+  ++ DL LKEL NGRLAM A +G
Sbjct:   21 TKPMKRAFSLFAENSEAFPFLNRPEKLDGLSVSFMSTRTLILVGTMIGDVGFDPLRLAEVQVDLSYARGAEIKHGRIAMLATVGFLVQEYVHLPGEAYQNSQPLKAPWTVPWAANFQILLLAGCVELATADKTYGD--TPWDLGFDPLCFQEGKSQAELDDLALKELTNGRLAMMAFVG 197          
BLAST of mRNA_H-akashiwo_Contig1202.10.1 vs. uniprot
Match: A0A7S4A0Y6_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A0Y6_9STRA)

HSP 1 Score: 155 bits (392), Expect = 3.460e-44
Identity = 89/167 (53.29%), Postives = 111/167 (66.47%), Query Frame = 0
Query:    5 LATTQVTKPMTTMMAEKSKSLPFLTKPEKLDGSMVGDVGFDPLRITDQLTDLNFVRAAELKHGRVAMLAVVGFAIASKVNLYGDAAAISTPLDAPFMVPFAGNMQILSFIGIIELATLDSTYAGEGAPGDYGWDPLNFSKGKTPEQMKDLQLKELKNGRLAMWAILG 171
            LA   V+ P+  + AE S++ PFL +PEKLDG+MVGDVGFDPLR+ +   DL + R AE+KHGR+AMLA VGF I    ++ G       PL AP+ VP+A N+QIL   G IELAT D TY GE  P D G+DPL F +GK+  +M  L L EL NGRLAM A +G
Sbjct:   72 LAPAPVSTPVV-VRAENSEAFPFLKRPEKLDGTMVGDVGFDPLRLAEVQVDLTYARGAEVKHGRIAMLACVGFIIQEYWHIPGADYQNFKPLTAPWTVPWAANLQILMLAGAIELATADKTY-GE-TPWDLGFDPLCFQEGKSKAEMDRLMLGELTNGRLAMMAFVG 235          
BLAST of mRNA_H-akashiwo_Contig1202.10.1 vs. uniprot
Match: A0A6U1P673_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1P673_9STRA)

HSP 1 Score: 147 bits (372), Expect = 1.040e-41
Identity = 77/141 (54.61%), Postives = 101/141 (71.63%), Query Frame = 0
Query:   31 PEKLDGSMVGDVGFDPLRITDQLTDLNFVRAAELKHGRVAMLAVVGFAIASKVNLYGDAAAISTPLDAPFMVPFAGNMQILSFIGIIELATLDSTYAGEGAPGDYGWDPLNFSKGKTPEQMKDLQLKELKNGRLAMWAILG 171
            PEKLDG+M+GD GFDP+ IT+QLTDLN+VRAAELKHGRVAM+AV+GF +   V L G   A S P +A   +P + + QI + I ++EL T   T  GEG PGDYG+   N  +GK+ + +  ++LKE+KNGRLAM AI+G
Sbjct:   55 PEKLDGTMIGDAGFDPMGITEQLTDLNYVRAAELKHGRVAMIAVIGFVVQQYVQLPGR--AFSDPFEAVAKLPLSVHAQIFAAIAVVELLTELKTINGEGEPGDYGFGSKNL-EGKSEDYVNSMKLKEIKNGRLAMIAIIG 192          
BLAST of mRNA_H-akashiwo_Contig1202.10.1 vs. uniprot
Match: F0Y094_AURAN (Putative plastid light harvesting protein isoform 8 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y094_AURAN)

HSP 1 Score: 145 bits (367), Expect = 2.530e-41
Identity = 74/136 (54.41%), Postives = 95/136 (69.85%), Query Frame = 0
Query:   36 GSMVGDVGFDPLRITDQLTDLNFVRAAELKHGRVAMLAVVGFAIASKVNLYGDAAAISTPLDAPFMVPFAGNMQILSFIGIIELATLDSTYAGEGAPGDYGWDPLNFSKGKTPEQMKDLQLKELKNGRLAMWAILG 171
            G+M+GDVGFDPLR+ +   DL++ R AE+KHGR+AMLA VGF +   V+L G+A   S PL AP+ VP+A N+QIL   G +ELAT D TY     P D G+DPL F +GK+  ++ DL LKEL NGRLAM A +G
Sbjct:   31 GTMIGDVGFDPLRLAEVQVDLSYARGAEIKHGRIAMLATVGFLVQEYVHLPGEAYQNSQPLKAPWTVPWAANLQILLLAGCVELATADKTYGD--TPWDLGFDPLCFQEGKSQAELDDLALKELTNGRLAMMAFVG 164          
BLAST of mRNA_H-akashiwo_Contig1202.10.1 vs. uniprot
Match: A0A0G4ELS5_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4ELS5_VITBC)

HSP 1 Score: 146 bits (368), Expect = 4.940e-41
Identity = 86/159 (54.09%), Postives = 112/159 (70.44%), Query Frame = 0
Query:   17 MMAEKSKSLPFLTKPEKLDGSMVGDVGFDPLRITDQLTDLNFVRAAELKHGRVAMLAVVGFAI-ASKVNLYGDAAAISTPLDAPFMVPFAGNMQILSFIGIIELATLDSTYAGE---GAPGDYGWDPLNFSKGKTPEQMKDLQLKELKNGRLAMWAILG 171
            M AE S+SLPFL +P KLD SM GDVGFDP  ++DQL +L ++RAAELK+GRVAMLAVVG+ + A  ++L G         +A    P A ++QI++  G++ELA LD  + G       G+YG+DPLNFSKGK+  QM DL+LKE+KNGRLAM AI+G
Sbjct:   44 MQAEMSQSLPFLMRPSKLDKSMAGDVGFDPFLLSDQL-NLEWMRAAELKNGRVAMLAVVGWLVTALGIHLPGRD---FVGFEAVSKNPLAVHLQIIAACGMVELANLDKDFGGNYVNNEIGNYGFDPLNFSKGKSQAQMDDLRLKEVKNGRLAMIAIIG 198          
BLAST of mRNA_H-akashiwo_Contig1202.10.1 vs. uniprot
Match: A0A7S1TMR6_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TMR6_9RHOD)

HSP 1 Score: 142 bits (357), Expect = 1.510e-39
Identity = 78/157 (49.68%), Postives = 101/157 (64.33%), Query Frame = 0
Query:   15 TTMMAEKSKSLPFLTKPEKLDGSMVGDVGFDPLRITDQLTDLNFVRAAELKHGRVAMLAVVGFAIASKVNLYGDAAAISTPLDAPFMVPFAGNMQILSFIGIIELATLDSTYAGEGAPGDYGWDPLNFSKGKTPEQMKDLQLKELKNGRLAMWAILG 171
            T +   KS+++PFL KP+ LDGS+ GD GFDPLR++  L +L ++RAAELKHGR+ MLA +G+ +   V L G        L A + VP A  +QI++FI IIEL T  S Y    APGDYG+DPLN  K    E+    QL E+KNGRLAM A +G
Sbjct:   26 TVVRMAKSQAIPFLEKPDTLDGSLAGDAGFDPLRLSKYL-NLKYLRAAELKHGRICMLATLGWVVQEIVRLPGPMFQEKHALQAIYKVPLASWVQIIAFISIIELVTFRSNYDDSSAPGDYGFDPLNLGKSGVIERY---QLNEIKNGRLAMIAFMG 178          
BLAST of mRNA_H-akashiwo_Contig1202.10.1 vs. uniprot
Match: A0A7S2DWT1_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2DWT1_9STRA)

HSP 1 Score: 134 bits (338), Expect = 2.510e-36
Identity = 78/154 (50.65%), Postives = 101/154 (65.58%), Query Frame = 0
Query:   19 AEKSKSLPFLTKPEKLDGSMVGDVGFDPLRITDQLTDLNFVRAAELKHGRVAMLAVVGFAIA-SKVNLYGDAAAISTPLDAPFMVPFAGNMQILSFIGIIELATLDSTYAGEGAPGDYGWDPLNFSKGKTPEQMKDLQLKELKNGRLAMWAILG 171
            AE SKS+PFL +PEKLDGSM GD+GFDP+ +++   DLN+ R AELKHGR++MLA+VG  +  S +++ G     + P  A   V + GNMQIL  IGIIELAT +  Y G+G PGD GW         T EQ+K  Q +E+ + RLAM AI G
Sbjct:   64 AEMSKSIPFLPRPEKLDGSMPGDMGFDPMGLSEIQQDLNYARWAELKHGRISMLAIVGMVVQESGIHIPGAQFTETDPFAAVAKVGYVGNMQILLTIGIIELATFNKLY-GDGTPGDIGW-AFGALDNMTEEQIKYRQEQEVIHCRLAMIAITG 215          
BLAST of mRNA_H-akashiwo_Contig1202.10.1 vs. uniprot
Match: B8C2K6_THAPS (Fucoxanthin chl a/c light-harvesting protein n=2 Tax=Thalassiosirophycidae TaxID=33846 RepID=B8C2K6_THAPS)

HSP 1 Score: 133 bits (334), Expect = 4.190e-36
Identity = 80/158 (50.63%), Postives = 97/158 (61.39%), Query Frame = 0
Query:   15 TTMMAEKSKSLPFLTKPEKLDGSMVGDVGFDPLRITDQLTDLNFVRAAELKHGRVAMLAVVGFAIASK-VNLYGDAAAISTPLDAPFMVPFAGNMQILSFIGIIELATLDSTYAGEGAPGDYGWDPLNFSKGKTPEQMKDLQLKELKNGRLAMWAILG 171
            T  + E SKS+PFLT PEKLDGSM GDVGFDP+ ++D  TDLN+ R AELKHGR+ MLAVVG        +L GDA A   P +A   V FA N Q L  IG++ELA  +  Y G+G PGD GW     SK     Q+K     E+ + RLAM A +G
Sbjct:   26 TVALNEMSKSIPFLTVPEKLDGSMAGDVGFDPMGLSDIQTDLNYARWAELKHGRICMLAVVGMVWQEYGPHLPGDAYATKDPWEAISSVGFASNFQTLLAIGVVELANWNKYY-GDGTPGDIGWTGGQLSK-MNDAQIKTRMESEIVHCRLAMIAFIG 181          
BLAST of mRNA_H-akashiwo_Contig1202.10.1 vs. uniprot
Match: A0A7S3V849_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V849_9STRA)

HSP 1 Score: 132 bits (331), Expect = 1.120e-35
Identity = 76/153 (49.67%), Postives = 97/153 (63.40%), Query Frame = 0
Query:   19 AEKSKSLPFLTKPEKLDGSMVGDVGFDPLRITDQLTDLNFVRAAELKHGRVAMLAVVGFAIASKVNLYGDAAAISTPLDAPFMVPFAGNMQILSFIGIIELATLDSTYAGEGAPGDYGWDPLNFSKGKTPEQMKDLQLKELKNGRLAMWAILG 171
            AE SKSLPF+  PEKLDGSM GDVGFDP+ +++   DL + R AELKHGRVAMLAVVG    +  +L G+A   + P  AP  V    N+QI + IG +ELA  +  Y G   PGD GW       GK+PEQ+   + +E+++ RLAM AI G
Sbjct:   32 AEMSKSLPFMPVPEKLDGSMAGDVGFDPMGLSEIQQDLTYARWAELKHGRVAMLAVVGLITQTYFHLPGEAYQNADPFGAPATVGMGVNLQIFAAIGCVELANFNRHYDGS-EPGDIGWTG-GLLAGKSPEQIAKAKEQEIQHCRLAMLAITG 182          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1202.10.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
W7TX20_9STRA1.210e-5159.60Light-harvesting protein n=2 Tax=Monodopsidaceae T... [more]
F0YKY4_AURAN1.760e-4649.72Putative plastid light harvesting protein isoform ... [more]
A0A7S4A0Y6_9STRA3.460e-4453.29Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A6U1P673_9STRA1.040e-4154.61Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
F0Y094_AURAN2.530e-4154.41Putative plastid light harvesting protein isoform ... [more]
A0A0G4ELS5_VITBC4.940e-4154.09Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A7S1TMR6_9RHOD1.510e-3949.68Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
A0A7S2DWT1_9STRA2.510e-3650.65Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
B8C2K6_THAPS4.190e-3650.63Fucoxanthin chl a/c light-harvesting protein n=2 T... [more]
A0A7S3V849_9STRA1.120e-3549.67Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022796Chlorophyll A-B binding proteinPFAMPF00504Chloroa_b-bindcoord: 31..171
e-value: 7.1E-36
score: 124.2
NoneNo IPR availableGENE3D1.10.3460.10Chlorophyll a/b binding protein domaincoord: 20..171
e-value: 3.4E-38
score: 133.5
NoneNo IPR availablePANTHERPTHR21649:SF125CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTICcoord: 11..171
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 16..171
IPR001344Chlorophyll A-B binding protein, plant and chromistaPANTHERPTHR21649CHLOROPHYLL A/B BINDING PROTEINcoord: 11..171

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1202contigH-akashiwo_Contig1202:238663..243535 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1202.10.1mRNA_H-akashiwo_Contig1202.10.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig1202 238661..243535 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig1202.10.1 ID=prot_H-akashiwo_Contig1202.10.1|Name=mRNA_H-akashiwo_Contig1202.10.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=171bp
APVQLATTQVTKPMTTMMAEKSKSLPFLTKPEKLDGSMVGDVGFDPLRIT
DQLTDLNFVRAAELKHGRVAMLAVVGFAIASKVNLYGDAAAISTPLDAPF
MVPFAGNMQILSFIGIIELATLDSTYAGEGAPGDYGWDPLNFSKGKTPEQ
MKDLQLKELKNGRLAMWAILG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022796Chloroa_b-bind
IPR001344Chloro_AB-bd_pln