prot_H-akashiwo_Contig12.45.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig12.45.1
Unique Nameprot_H-akashiwo_Contig12.45.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length51
Homology
BLAST of mRNA_H-akashiwo_Contig12.45.1 vs. uniprot
Match: A0A7S3XQS4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQS4_HETAK)

HSP 1 Score: 98.2 bits (243), Expect = 2.450e-23
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0
Query:    1 VELAQCGVGAEGCRRLAGWLARPGAMLQSLDLAKNTIGEAGAQALALALVG 51
            VELAQCGVGAEGCRRLAGWLARPGAMLQSLDLAKNTIGEAGAQALALALVG
Sbjct:   78 VELAQCGVGAEGCRRLAGWLARPGAMLQSLDLAKNTIGEAGAQALALALVG 128          
BLAST of mRNA_H-akashiwo_Contig12.45.1 vs. uniprot
Match: A0A8J5XUE7_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XUE7_DIALT)

HSP 1 Score: 47.8 bits (112), Expect = 7.040e-5
Identity = 28/51 (54.90%), Postives = 36/51 (70.59%), Query Frame = 0
Query:    1 VELAQCGVGAEGCRRLAGWLARPGAMLQSLDLAKNTIGEAGAQALALALVG 51
            +ELA CGV A    RLA  L+  GA LQSL L +N +G+AGA+A+A AL+G
Sbjct:  472 LELAACGVDARTGARLARALSAGGAALQSLSLRRNALGDAGAEAIARALLG 522          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig12.45.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7S3XQS4_HETAK2.450e-23100.00Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A8J5XUE7_DIALT7.040e-554.90Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 26..46
e-value: 2.9E-4
score: 20.7
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 1..51
e-value: 4.4E-9
score: 38.1
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 2..49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig12contigH-akashiwo_Contig12:1697889..1698485 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig12.45.1mRNA_H-akashiwo_Contig12.45.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig12 1697889..1698485 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig12.45.1 ID=prot_H-akashiwo_Contig12.45.1|Name=mRNA_H-akashiwo_Contig12.45.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=51bp
VELAQCGVGAEGCRRLAGWLARPGAMLQSLDLAKNTIGEAGAQALALALV
G
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf