prot_H-akashiwo_Contig1196.2.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig1196.2.1
Unique Nameprot_H-akashiwo_Contig1196.2.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length52
Homology
BLAST of mRNA_H-akashiwo_Contig1196.2.1 vs. uniprot
Match: A0A7S2USD3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USD3_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 1.450e-14
Identity = 39/52 (75.00%), Postives = 45/52 (86.54%), Query Frame = 0
Query:    1 RLERRAG-TKLAENLAAKALQECPGSGLLWAEEIGAAPRPQRKARSVEALKR 51
            RLERR G +KLAENL AKALQ+CP SG++WAEEI  APR Q++ARSVEALKR
Sbjct:  169 RLERRHGNSKLAENLTAKALQDCPSSGIIWAEEISCAPRHQQRARSVEALKR 220          
BLAST of mRNA_H-akashiwo_Contig1196.2.1 vs. uniprot
Match: F0YJY9_AURAN (PRP1_N domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJY9_AURAN)

HSP 1 Score: 73.2 bits (178), Expect = 7.940e-14
Identity = 40/52 (76.92%), Postives = 44/52 (84.62%), Query Frame = 0
Query:    1 RLERRAGT-KLAENLAAKALQECPGSGLLWAEEIGAAPRPQRKARSVEALKR 51
            RLERR G  KLAENL+AKALQECP SG LWA+EI AAPRP RK +S+EALKR
Sbjct:  800 RLERRHGNRKLAENLSAKALQECPESGELWADEIFAAPRPARKGKSLEALKR 851          
BLAST of mRNA_H-akashiwo_Contig1196.2.1 vs. uniprot
Match: A0A8J2SWX2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SWX2_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 3.000e-11
Identity = 37/52 (71.15%), Postives = 40/52 (76.92%), Query Frame = 0
Query:    1 RLERRAG-TKLAENLAAKALQECPGSGLLWAEEIGAAPRPQRKARSVEALKR 51
            RLERR G  KLAENL AKALQEC  SG LWA+ I  APRP RK +S+EALKR
Sbjct:  851 RLERRHGHQKLAENLQAKALQECESSGELWADCISTAPRPARKGKSLEALKR 902          
BLAST of mRNA_H-akashiwo_Contig1196.2.1 vs. uniprot
Match: UPI0003C1A17A (pre-mRNA-processing factor 6-like n=1 Tax=Latimeria chalumnae TaxID=7897 RepID=UPI0003C1A17A)

HSP 1 Score: 62.4 bits (150), Expect = 4.850e-11
Identity = 34/52 (65.38%), Postives = 39/52 (75.00%), Query Frame = 0
Query:    1 RLERRAGTK-LAENLAAKALQECPGSGLLWAEEIGAAPRPQRKARSVEALKR 51
            RLE RAG K +A  L AKALQECP SG+LWAE I    RPQRK +SV+ALK+
Sbjct:   27 RLEYRAGLKNIASTLMAKALQECPNSGILWAEAIFLEARPQRKTKSVDALKK 78          
BLAST of mRNA_H-akashiwo_Contig1196.2.1 vs. uniprot
Match: A0A2D4EXG0_MICCO (Uncharacterized protein (Fragment) n=1 Tax=Micrurus corallinus TaxID=54390 RepID=A0A2D4EXG0_MICCO)

HSP 1 Score: 61.2 bits (147), Expect = 7.160e-11
Identity = 33/52 (63.46%), Postives = 39/52 (75.00%), Query Frame = 0
Query:    1 RLERRAGTK-LAENLAAKALQECPGSGLLWAEEIGAAPRPQRKARSVEALKR 51
            RLE RAG K +A  L AKALQECP SG+LW+E I    RPQRK +SV+ALK+
Sbjct:   32 RLEYRAGLKNIANTLMAKALQECPNSGILWSEAIFLEARPQRKTKSVDALKK 83          
BLAST of mRNA_H-akashiwo_Contig1196.2.1 vs. uniprot
Match: A0A7S2EY21_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EY21_TRICV)

HSP 1 Score: 64.7 bits (156), Expect = 7.630e-11
Identity = 35/52 (67.31%), Postives = 41/52 (78.85%), Query Frame = 0
Query:    1 RLERRAGT-KLAENLAAKALQECPGSGLLWAEEIGAAPRPQRKARSVEALKR 51
            RLERRAG  KLA  L A+ALQECP SGLL AE I  APRP++K+RS +A+KR
Sbjct:  407 RLERRAGNDKLASALMARALQECPSSGLLLAENIATAPRPEQKSRSADAIKR 458          
BLAST of mRNA_H-akashiwo_Contig1196.2.1 vs. uniprot
Match: C1MWP2_MICPC (mRNA splicing protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MWP2_MICPC)

HSP 1 Score: 62.8 bits (151), Expect = 3.650e-10
Identity = 29/43 (67.44%), Postives = 36/43 (83.72%), Query Frame = 0
Query:    9 KLAENLAAKALQECPGSGLLWAEEIGAAPRPQRKARSVEALKR 51
            + A+ L AKALQECP SG+LWAE +  APRPQRK++SV+ALKR
Sbjct:  792 RAADALMAKALQECPASGMLWAEAVRMAPRPQRKSKSVDALKR 834          
BLAST of mRNA_H-akashiwo_Contig1196.2.1 vs. uniprot
Match: A0A8C9XKA3_SANLU (Pre-mRNA-processing factor 6 n=1 Tax=Sander lucioperca TaxID=283035 RepID=A0A8C9XKA3_SANLU)

HSP 1 Score: 61.6 bits (148), Expect = 9.330e-10
Identity = 33/52 (63.46%), Postives = 39/52 (75.00%), Query Frame = 0
Query:    1 RLERRAGTK-LAENLAAKALQECPGSGLLWAEEIGAAPRPQRKARSVEALKR 51
            RLE RAG K +A  L AKALQECP SG+LWAE +    RPQRK +SV+ALK+
Sbjct:  775 RLEFRAGLKNIANTLMAKALQECPNSGILWAEAVFLEARPQRKTKSVDALKK 826          
BLAST of mRNA_H-akashiwo_Contig1196.2.1 vs. uniprot
Match: UPI00189AA6A4 (LOW QUALITY PROTEIN: pre-mRNA-processing factor 6-like n=1 Tax=Cebus imitator TaxID=2715852 RepID=UPI00189AA6A4)

HSP 1 Score: 61.2 bits (147), Expect = 1.260e-9
Identity = 32/52 (61.54%), Postives = 39/52 (75.00%), Query Frame = 0
Query:    1 RLERRAGTK-LAENLAAKALQECPGSGLLWAEEIGAAPRPQRKARSVEALKR 51
            RLE RAG K +A  L AKALQECP SG+LW+E I    RPQRK +S++ALK+
Sbjct:  284 RLENRAGLKNIANTLMAKALQECPNSGILWSEAIFVEARPQRKTKSMDALKK 335          
BLAST of mRNA_H-akashiwo_Contig1196.2.1 vs. uniprot
Match: C1EFS7_MICCC (mRNA splicing protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EFS7_MICCC)

HSP 1 Score: 61.2 bits (147), Expect = 1.280e-9
Identity = 29/43 (67.44%), Postives = 34/43 (79.07%), Query Frame = 0
Query:    9 KLAENLAAKALQECPGSGLLWAEEIGAAPRPQRKARSVEALKR 51
            K A+ L +K LQECP SG LWAE +  APRPQRKA+SV+ALKR
Sbjct:  782 KAADALLSKGLQECPASGALWAEAVKMAPRPQRKAKSVDALKR 824          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1196.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2USD3_9STRA1.450e-1475.00Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
F0YJY9_AURAN7.940e-1476.92PRP1_N domain-containing protein n=1 Tax=Aureococc... [more]
A0A8J2SWX2_9STRA3.000e-1171.15Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
UPI0003C1A17A4.850e-1165.38pre-mRNA-processing factor 6-like n=1 Tax=Latimeri... [more]
A0A2D4EXG0_MICCO7.160e-1163.46Uncharacterized protein (Fragment) n=1 Tax=Micruru... [more]
A0A7S2EY21_TRICV7.630e-1167.31Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
C1MWP2_MICPC3.650e-1067.44mRNA splicing protein n=1 Tax=Micromonas pusilla (... [more]
A0A8C9XKA3_SANLU9.330e-1063.46Pre-mRNA-processing factor 6 n=1 Tax=Sander luciop... [more]
UPI00189AA6A41.260e-961.54LOW QUALITY PROTEIN: pre-mRNA-processing factor 6-... [more]
C1EFS7_MICCC1.280e-967.44mRNA splicing protein n=1 Tax=Micromonas commoda (... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1196contigH-akashiwo_Contig1196:34706..34861 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1196.2.1mRNA_H-akashiwo_Contig1196.2.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig1196 34706..34861 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig1196.2.1 ID=prot_H-akashiwo_Contig1196.2.1|Name=mRNA_H-akashiwo_Contig1196.2.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=52bp
RLERRAGTKLAENLAAKALQECPGSGLLWAEEIGAAPRPQRKARSVEALK
R*
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