prot_H-akashiwo_Contig1192.2.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig1192.2.1
Unique Nameprot_H-akashiwo_Contig1192.2.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length93
Homology
[Close]
BLAST of mRNA_H-akashiwo_Contig1192.2.1 vs. uniprot
Match: A0A7S3Y2W7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y2W7_HETAK)

HSP 1 Score: 92.0 bits (227), Expect = 7.080e-21
Identity = 47/70 (67.14%), Postives = 50/70 (71.43%), Query Frame = 0 
Query:    7 VRCVVHTHFQYLYSSQRFFVMDAEDELCLSLNKGAGVHECKVFDGGPTAPVLGRRRRRPCPLRGGAKCKG 76
            V  V++THFQYLYSSQRFFVMDAEDELCLSLNKGA   ECKVFDGGPTA           P  GG K +G
Sbjct:  112 VYAVLYTHFQYLYSSQRFFVMDAEDELCLSLNKGAAFTECKVFDGGPTALFSAVAAAAVPPEGGGEKMQG 181
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1192.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S3Y2W7_HETAK7.080e-2167.14Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1192contigH-akashiwo_Contig1192:79149..144720 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1192.2.1mRNA_H-akashiwo_Contig1192.2.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig1192 79065..145298 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig1192.2.1 ID=prot_H-akashiwo_Contig1192.2.1|Name=mRNA_H-akashiwo_Contig1192.2.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=93bp
MGGWPCVRCVVHTHFQYLYSSQRFFVMDAEDELCLSLNKGAGVHECKVFD
GGPTAPVLGRRRRRPCPLRGGAKCKGLSKCCWSQKELTKESA*
back to top