prot_H-akashiwo_Contig1190.1.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig1190.1.1
Unique Nameprot_H-akashiwo_Contig1190.1.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length52
Homology
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BLAST of mRNA_H-akashiwo_Contig1190.1.1 vs. uniprot
Match: UPI0007383DFE (pseudouridylate synthase 7 homolog isoform X1 n=2 Tax=Diachasma alloeum TaxID=454923 RepID=UPI0007383DFE)

HSP 1 Score: 48.5 bits (114), Expect = 3.930e-5
Identity = 19/38 (50.00%), Postives = 27/38 (71.05%), Query Frame = 0 
Query:    2 LGGDYRRLLQWPRDFAWEAVEYRDPMAPLIHSDLDKLK 39
            LGG YR++LQ P+D +W  V Y D  A LI +D+DK++
Sbjct:  620 LGGQYRKILQVPKDMSWRIVHYNDLQADLILADIDKMR 657
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1190.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI0007383DFE3.930e-550.00pseudouridylate synthase 7 homolog isoform X1 n=2 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1190contigH-akashiwo_Contig1190:11526..13467 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1190.1.1mRNA_H-akashiwo_Contig1190.1.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig1190 11526..13467 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig1190.1.1 ID=prot_H-akashiwo_Contig1190.1.1|Name=mRNA_H-akashiwo_Contig1190.1.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=52bp
RLGGDYRRLLQWPRDFAWEAVEYRDPMAPLIHSDLDKLKEPFQDIAAKAE
EE
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