prot_H-akashiwo_Contig118.29.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig118.29.1
Unique Nameprot_H-akashiwo_Contig118.29.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length629
Homology
BLAST of mRNA_H-akashiwo_Contig118.29.1 vs. uniprot
Match: A0A7S3Y1P1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1P1_HETAK)

HSP 1 Score: 434 bits (1115), Expect = 7.170e-137
Identity = 268/686 (39.07%), Postives = 385/686 (56.12%), Query Frame = 0
Query:    1 MDLWHQTLAHTSESRIRQMAQQGFIPPHSIRLTDKLSFCNSCAAAAATRVKTHRKTSCGSVKPAHPIQEIGTDVAGPFPPDRHGNKYYRVFQCQFTKYRAIFPMKTKNDNILPHFLSFVESAKRSNPDTSIDDVAAVRLDGGGEFVEFRNFCQDLGIELLTSGRDNPDGCRV-EPQNRIILKVVRTVLHSSDLPPQFWSEAARYAVYTLNRTVSSDS-SISPYEAFFGFPASVKHFRAFGSPCWVHLQKERRGGGKLADRATEQRFLSFENSTGVYRLLSLNTGKIVTSKHVTFNEEPVI--RRALTKLPNPLA------VLQSE-----------LNCSVDAKLHQKGNFYPRLSSTTSARPTKTPPSSTSPQQP-----RKSSRAP----------------PPMLRFGYKLRAMLAC-------------SFAFLGTHSEAHTNPFNLAHAKTMSDWDMWHDAAVKEYKSLVANDVFELVERPTNKNVIKSRWVLAKKFE-DGVLKKYKGRLVAKGYSQQPGIDYAATFAPVVSAPSLRIILSLAAEQGLSLSQLDVQTAFLNGTLTEELNMEQPEGFRDPEFPDHVWKLKKSLYGLKQSPRCWYANLHSTLREYGFTRSEYDGCIYMRKVGDA-VTYVTIYVDNIVIAFNDDRTVAALKATLKKKYRITDAGRLENFLGLKI 629
            +DLWH    H SE RIR MA+ G IP  SI+ TDKLSFC  CA A ATR + H K     V    P+Q +  DVAG FP D    K+  +   ++T++R  F MK KN+ +LPH  SF+   +R   + S+  V  +RLD G EF E   FC   GI L  +G+DNP    + E  NRI+L + R VL +S L   +WSEAA+Y+V+T+NRT +S S S +PY++ F   AS+ H R FGS C+ H   E R G KL +RA + +FLS+      Y +L+L T ++  +K V F+E  V+   RA    P P        + +SE           +     A      +F  R+  +++      P +S S  Q      RKSSR+                 P     G  ++AM+                   LGTHSE   NP+NLAHA+   DW  W +A   EY SL+ ++V+ELV++P+  N++  RW+LAKK++ DG L KYK RL A+GYSQ  G+DY  TF+PVVS+ SLR +L++AA + + +  +D++TAFL+G L E++ M+QPEG+  P     V KLKKSLYGLKQ+P+CWY NL+  L + G+TR+ YD C+Y +       T +++YVD+IV+A +D   ++ +K  +   Y ++D G +E+ LG+K+
Sbjct:   44 IDLWHHRCVHISERRIRMMAKAGIIPASSIKATDKLSFCEDCAMAKATR-QPHSKKPRFDVA-TRPLQCLHCDVAGKFPSDSKSRKWMLIVCDEYTRFRRCFFMKHKNE-VLPHMQSFISMIQRVTQNNSLL-VENIRLDNGTEFSELAAFCDRSGILLEQTGKDNPASNGIAERSNRIVLDMTRVVLRASGLSNYYWSEAAKYSVHTINRTTTSSSRSTTPYQSLFKKKASIDHLRVFGSICYAHRPSETRPG-KLQERAVKCKFLSYNALERTYTVLNLTTHRLWVTKDVVFDERSVVDVERAPAVGPRPTTTAEFFPLFESEQASGGSSPAPTIEPGTRAAARPSRSFRGRVLESSAVHDVAGPTTSRSKPQNGDAVRRKSSRSASKQASKALSRLRRSRRPHRSVTGAIMKAMMVGINFVGGLNGVSGHQVCLLGTHSEQ--NPWNLAHAQRSPDWMRWREAVADEYDSLLRHNVWELVDKPSGANIVGCRWILAKKYDADGNLSKYKARLCAQGYSQIEGVDYTNTFSPVVSSASLRTVLTIAASEDMEIHCMDIKTAFLHGKLEEDIYMKQPEGYEVPGMEHKVLKLKKSLYGLKQAPKCWYQNLNGFLLQQGYTRNGYDSCVYSKVSSTGGKTLISVYVDDIVLASSDKSELSRIKKAISLGYNVSDMGEIESILGIKV 722          
BLAST of mRNA_H-akashiwo_Contig118.29.1 vs. uniprot
Match: A0A1X7U495_AMPQE (Uncharacterized protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7U495_AMPQE)

HSP 1 Score: 295 bits (754), Expect = 3.790e-84
Identity = 203/633 (32.07%), Postives = 317/633 (50.08%), Query Frame = 0
Query:    3 LWHQTLAHTSESRIRQMAQQGFIPPHSIRLTDKLSFCNSCAAAAATRVKTHRKTSCGSVKPAHPIQEIGTDVAGPFP-PDRHGNKYYRVFQCQFTKYRAIFPMKTKNDNILPHFLSFVESAKRSNPDTSIDDVAAVRLDGGGEFV--EFRNFCQDLGIELLTSGRDNPDGCRV-EPQNRIILKVVRTVLHSSDLPPQFWSEAARYAVYTLNRTVSSDS-SISPYEAFFGFPASVKHFRAFGSPCWVHLQKERRGGGKLADRATEQRFLSFENSTGVYRLLSLNTGKIVTSKHVTFNEEPVIRRALTKLPNPLAVLQSELNCSVDAKLHQKGNFYPRLSSTTSARPTKTPPSSTSPQQPRKSSRAPPPMLRFGYKLRAMLACSFAFLGTHSEAHTNPFNLAHAKTMSDWDMWHDAAVKEYKSLVANDVFELVERPTNKNVIKSRWVL-AKKFEDGVLKKYKGRLVAKGYSQQPGIDYAATFAPVVSAPSLRIILSLAAEQGLSLSQLDVQTAFLNGTLTEELNMEQPEGFRDPEFPDHVWKLKKSLYGLKQSPRCWYANLHSTLREYGFTRSEYDGCIYMRKVGDAVTYVTIYVDNIVIAFNDDRTVAALKATLKKKYRITDAGRLENFLGLKI 629
            +WHQ   H SES +  ++ Q  +          +  C SC      R    +K   G  +P + ++ + +D+ GP   P   G KY+  F    T Y  I+ +K K++     F  F+E   +   ++S+  +  +R D GGE+   EF  + +  GI+   S   NP+   V E  NR +++ VR +L SS LP +FW+EA   AVY  NR+ +    +++P+EA+ G   SVKH R FG   + H+ K+ R   KL  +A     L + N+T  YRL      ++  S+ V F+E   ++    K  +  ++ +S  +  +D   +Q  +    +                               +R  ++ R        ++ T       P ++  A T ++ + W +A  +E KS+ +N V+ELVE P  K  I  +WV   K   DG +++YK RLVAKG+SQQ G+DY  TF+PV    SLR++L+LA   GL++ Q+DV TAFLNGTL EE+ M+QPEG+ +      V +L  SLYGLKQ+PRCW + L   L+E GF ++  D CIY    GD    + IYVD+I++A      +  +K+ L   + + D G L  FLG+K+
Sbjct:  441 IWHQRFGHLSESGLHMLSNQKLVDDFDYNTAKSIPLCKSCIDGKHHRSPFPKK---GRTRPQNSLELVHSDICGPMKTPSLSGAKYFLTFVDDKTHYIWIYVLKQKSEA----FSKFLEWKAQVELESSLK-LKVLRTDNGGEYTSTEFNEYLKREGIKHELSVPKNPEQNGVAERLNRTLIEAVRAMLSSSTLPHRFWAEALSTAVYLKNRSYTKAVINMTPHEAWNGRRPSVKHLRVFGCTAYSHIPKDERS--KLDPKARRCILLGYSNTTKGYRLYDTKRDRVFYSRDVIFDE---MKLGFEKEQDE-SITESSNHFGIDLSSNQTDDAEDAVPDENDXXXXXXXXXXXXXXXXNXXXXGETDTVRRSHRERRRPDYYGTWIYTADAQRREPQSVTEAMTSNEREKWSEAMEREMKSIESNKVWELVELPEGKKPIGCKWVYKVKTGADGQVERYKARLVAKGFSQQYGLDYDQTFSPVARFESLRLLLALAVRNGLTVHQMDVTTAFLNGTLKEEVYMDQPEGYVEKGKEKLVCRLNHSLYGLKQAPRCWNSVLDQKLKEIGFVQTVSDPCIYKAVSGDDFI-IGIYVDDILLAGKSKERMIEVKSVLSNMFEVKDLGELNYFLGIKV 1058          
BLAST of mRNA_H-akashiwo_Contig118.29.1 vs. uniprot
Match: A0A438FVW7_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Vitis vinifera TaxID=29760 RepID=A0A438FVW7_VITVI)

HSP 1 Score: 295 bits (755), Expect = 1.300e-83
Identity = 204/653 (31.24%), Postives = 334/653 (51.15%), Query Frame = 0
Query:    3 LWHQTLAHTSESRIRQMAQQGFIPPHSIRLTDKLSFCNSCAAAAATRVKTHRKTSCGSVKPAHPIQEIGTDVAGPFP-PDRHGNKYYRVFQCQFTKYRAIFPMKTKND--NILPHFLSFVESAKRSNPDTSIDDVAAVRLDGGGEFV--EFRNFCQDLGIEL-LTSGRDNPDGCRVEPQNRIILKVVRTVLHSSDLPPQFWSEAARYAVYTLNRTVSSDS-SISPYEAFFGFPASVKHFRAFGSPCWVHLQKERRGGGKLADRATEQRFLSFENSTGVYRLLSLNTGKIVTSKHVTFNEEPVIRRALTKLPNPLAVLQSELNCSVDAKLHQKGNFYPRLSSTTSARPTKTPPSSTSPQQPRKSSRAPP--PMLRFGY-----------KLRAML----ACSFAFLGTHSEAHTNPFNLAHAKTMSDWDMWHDAAVKEYKSLVANDVFELVERPTNKNVIKSRWVLAKKFE-DGVLKKYKGRLVAKGYSQQPGIDYAATFAPVVSAPSLRIILSLAAEQGLSLSQLDVQTAFLNGTLTEELNMEQPEGFRDPEFPDHVWKLKKSLYGLKQSPRCWYANLHSTLREYGFTRSEYDGCIYMR-KVGDAVTYVTIYVDNIVIAFNDDRTVAALKATLKKKYRITDAGRLENFLGLKI 629
            LWH+   H + + ++ + Q+  +      + +K   C+ CA     R    +  S  + K    ++ + TD+ GP   P +  NKY+ +F   FT+   +F MK K++  +I   F SFVE             +  +R D G E+   +F NFC+D G+E  LT          VE +N+ ++++ + +L+   LP  FW+EA   AVY LNR  +    + +P EA+ G   SV+HF+ FG  C+  + KERR   KL + + +  F+ + + +  YRL +L T K++ S+ V F+E+        K+     +L +EL         + GN                   STS   P++S R+ P  P +               K+R++      C+   +   S            + + D D W  A  KE   +  N+ ++L+E+P +K +I  +W+   K+  DG +++ K RLVAKGYSQQPG+D+  TFAPV    ++R I+++AA++G  L QLD+++AFLNG L EE+ +EQP+GF      + V+KLKK+LYGLKQ+PR WY  + S   E GF RS+ +  +Y++ K    +  V +YVD+++   ND++ V   +  + KKY ++D G L  FLG+++
Sbjct:  219 LWHRRFGHLNFNSLKMLCQRKMVQGLPNTIEEKNEVCDGCALGKHHRQSFPKGVSWRAKKV---LELVHTDICGPMSTPSQGNNKYFVLFINDFTRMTWVFFMKQKSEVFSIFKKFKSFVEKQSGCY-------IKTLRSDRGMEYTSSQFGNFCEDEGVERQLTVAYTPQQNGVVERKNQTVMEMAKAMLYKKGLPKIFWAEAVNTAVYLLNRCPTKALLNKTPIEAWSGRKPSVRHFKVFGCLCYSQVPKERRS--KLDETSEKCIFMGYSSQSKGYRLYNLKTSKLIISRDVIFDEKAAWNWEEGKILKK-TILVNELQTKAPV---ETGN------------------GSTSTSSPQESPRSVPLSPSIESXXXXXXXXXXXPRKMRSLTDVYERCNLCIVEPQS----------FEEAIKDED-WRKAMEKEIDVIEKNETWQLIEKPKDKEIIGVKWIFRVKYHSDGRVQRLKARLVAKGYSQQPGVDFHETFAPVARLDTIRTIIAVAAQKGWLLYQLDIKSAFLNGKLEEEIYVEQPQGFVVDGEENKVYKLKKALYGLKQAPRAWYTQIDSYFIENGFIRSKSEPTLYVKSKDNSQILIVALYVDDLIFTGNDEKMVEKFRNEMMKKYEMSDMGLLHYFLGIEV 826          
BLAST of mRNA_H-akashiwo_Contig118.29.1 vs. uniprot
Match: A0A085MW59_9BILA (Uncharacterized protein (Fragment) n=1 Tax=Trichuris suis TaxID=68888 RepID=A0A085MW59_9BILA)

HSP 1 Score: 287 bits (734), Expect = 4.700e-82
Identity = 212/648 (32.72%), Postives = 322/648 (49.69%), Query Frame = 0
Query:    1 MDLWHQTLAHTSESRIRQMAQQGFIPPHSIRLTDKLSFCNSCAAAAATRVKTHRKTSCGSVKPAHPIQEIGTDVAGPFPP-DRHGNKYYRVFQCQFTKYRAIFPMKTKNDNILPHFLSFVESAKRSNPDTSIDDVAAVRLDGGGEF--VEFRNFCQDLGIELLTSGRDNPD-GCRVEPQNRIILKVVRTVLHSSDLPPQFWSEAARYAVYTLNRT-VSSDSSISPYEAFFGF-PASVKHFRAFGSPCWVHLQKERRGGGKLADRATEQRFLSFENSTGVYRLLSLNTGKIVTSKHVTFNEEPVIRRALTKLPNP------------LAVLQSELNCSVDAKLHQKGNFYPRLSSTTSARPTKTPPSSTSPQQPRKSSRAPPPMLRFGYKLRAMLACSFAFLGTHSEAHTNPFNLAHAKTMSDWDMWHDAAVKEYKSLVANDVFELVERPTNKNVIKSRWVLAKKFE-DGVLKKYKGRLVAKGYSQQPGIDYAATFAPVVSAPSLRIILSLAAEQGLSLSQLDVQTAFLNGTLTEELNMEQPEGFRDPEFPDHVWKLKKSLYGLKQSPRCWYANLHSTLREYGFTRSEYDGCIYMRKVGDAVTYVTIYVDNIVIAFNDDRTVAALKATLKKKYRITDAGRLENFLGLKI 629
            + LWH+ L H ++  +R++ +   I  H      +  FC  C      R   H + +    +P  P   +  DV GP       G+KY+ VF+  F +YR +F +K K D +     +FV  A      T+ + V  V  DGG EF  V  +   Q  GI + T+    P+     E +NRI+++  R++LHS  LP   W EA   A + LNRT  ++    SP E +F   P  + HFR FG+ C+VH+ K+RR   K   ++   RF+ + +    YR+    T +IVTS+ V F  E  +      + +             +  L++E+N  + ++  + G+ +   S    A   +  P ++ P++ RK               R      +A L   S    NP     A    D   W  A  +E  SL  N V+ LV+ P  K V+ +RWV   K + DG + KYK RLVAKGY Q+PGIDY+ TF+PV    ++R ILS+ A + L   Q DV+TAFL GTL EE+ + QPEGF D    D V +L +SLYGLKQSPRCW   L   +++ G  +S  D C+++R+   +   V +YVD+ ++A +D   +    A ++K++RIT  G L++FL + I
Sbjct:  325 LQLWHERLCHQNKRHVREVLKNCGIEVHV-----QEEFCTGCVFGKQHRGSFHVRKN----RPKVPGALVHADVCGPMENVSMSGSKYFVVFKDDFPRYRRVFFLK-KKDEVAQCLETFVNEAS-----TTGNTVKCVLCDGGLEFNNVSVKKILQQRGITMRTAMPYTPEQNGAAERENRILVETGRSMLHSKGLPIFLWDEAVNTACHVLNRTGPTTVKGKSPIELWFKRGPVRIDHFRVFGTECFVHVPKQRRR--KWDKKSVAGRFMGYCDEKDGYRVWLPGTNRIVTSRDVIFKPEETLTSVQLTVKSSSEKXXXXXNSSYVEQLKAEINSELPSEQEEAGSTFESDSRPEEA---EWEPKNSRPERQRK---------------RPKYLSDYALLTETS----NPKTFHEAMKSEDAIHWRKAMEEEMCSLQENSVWTLVDLPAGKRVVDTRWVFCVKTKVDGTVAKYKARLVAKGYVQRPGIDYSETFSPVARFDTVRTILSVGAVEKLKFQQFDVKTAFLYGTLEEEVYVRQPEGFEDG--TDRVCRLNRSLYGLKQSPRCWNKRLVEFMKKKGMKQSTADPCLFIRQGRKSKLMVVVYVDDGILAGSDTCEMELFLAEMEKEFRITK-GPLDSFLVIGI 930          
BLAST of mRNA_H-akashiwo_Contig118.29.1 vs. uniprot
Match: A0A8K1FHK1_PYTOL (Uncharacterized protein n=3 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHK1_PYTOL)

HSP 1 Score: 288 bits (737), Expect = 1.100e-80
Identity = 211/684 (30.85%), Postives = 339/684 (49.56%), Query Frame = 0
Query:    3 LWHQTLAHTSESRIRQMAQQGFIPPHSIRLTDKLSFCNSCAAAAATRVKTHRKTSCGSVKPAHPIQEIGTDVAGPF-PPDRHGNKYYRVFQCQFTKYRAIFPMKTKNDNILPHFLSFVESAKRSNPDTSIDDVAAVRLDGGGEF--VEFRNFCQDLGIELLTSGRDNPDGCRV-EPQNRIILKVVRTVLHSSDLPPQFWSEAARYAVYTLNR--TVSSDSSISPYEAFFGFPASVKHFRAFGSPCWVHLQKERRGGGKLADRATEQRFLSFENSTGVYRLLSLNTGKIVTSKHVTFNEEPVIRRALTKLPNPLAVLQSELNCSVDAKLHQKG-NFYP-RLSSTTSARPTKTPPS---STSPQ--QPRKSSRA--------------------PPPMLRFGYKLRAMLACSF-------------AFLGTHSE----AHTN------PFNLAHAKTMSDWDMWHDAAVKEYKSLVANDVFELVERPTNKNVIKSRWVL-AKKFEDGVLKKYKGRLVAKGYSQQPGIDYAATFAPVVSAPSLRIILSLAAEQGLSLSQLDVQTAFLNGTLTEELNMEQPEGFRDPEFPDHVWKLKKSLYGLKQSPRCWYANLHSTLREYGFTRSEYDGCIYMRKVGDAVTYVTIYVDNIVIAFNDDRTVAALKATLKKKYRITDAGRLENFLGLKI 629
            LWH  L H     +  + ++       +    +   C+ CA    TRV+    T+    +    ++ + +DV GP   P   G KY+  F    +++ A++ M+ K++ +   F+ FV+ A+          V  +R D GGE+   +F  FC D GI    +    P+   V E  NR +++  R +L  + +P ++W EA   + +  NR  T + D  +SP+E +     ++ + + FG   +VH+ KE+R   K   R+   RFL + +    YR   L+TG+IV S+   F E+        ++       + E +  +D     +  N  P   +STT+ +PT+  P     T  Q  QP +   A                    PP   R+G   R   A S              A L +  E    AH        P +   A   SD   W +A   E++SL  N+ +ELV  P  +  I S+WV   K+  +G++++YK RLVAKG+ Q+ G+D+  TFAPV    S+RIILSLAA+  L L Q+DV+TAFLNG L EE+ M+QP+G+ DP++P+H  KLK++LYGLKQSPR W   +   +R+ GFT+   D C+Y+++   A  +V IYVD++++A N+   +AA K  L +++ ++D G L+  LG+++
Sbjct:  429 LWHLRLGHIGHGGLEAIVKKNLAVGIDLGSVKQWELCSGCALGKQTRVRFQSATTD---RAKALLEVVHSDVCGPMRTPTFGGMKYFVTFIDDKSRHCAVYLMRNKSE-VFDKFVQFVKMAENQTDRR----VKMLRSDNGGEYKSAKFTKFCADRGIIQKFTPPYTPELNGVAERMNRTLVECARCMLEHAGMPNEYWGEAVTTSAFLRNRLPTRAQDLHMSPHEVWTKKKPTLANLKVFGCHAYVHVPKEKRS--KFDARSVLCRFLGYSDHEKAYRFEELSTGRIVVSRDAQFMEDTFDDGKREQVGGKTVEFRDE-DGELDGNSGDEDMNEQPAEPTSTTAEQPTRERPQWQQQTQGQRFQPLQQPNAEYPPGAKRILRTYSLEALSEPPVEKRYGRTSRTSGASSVPAPSQSSPLDDTSALLMSIEEEEEYAHVVYSVGDLPTSFKSAMESSDASQWMEACDSEFESLRKNETWELVPLPQGRKAISSKWVFKVKETAEGLIERYKARLVAKGFLQKYGVDFEETFAPVAKFTSIRIILSLAAQYKLVLHQMDVKTAFLNGLLDEEIYMKQPDGYIDPKYPNHACKLKRALYGLKQSPRMWNQTIDEFMRKIGFTKCNMDHCVYVKRNDSATMFVVIYVDDLILACNNKDLLAATKRALSERFEMSDLGELKYCLGMEV 1101          
BLAST of mRNA_H-akashiwo_Contig118.29.1 vs. uniprot
Match: A0A8J6CSB6_9ROSI (Integrase catalytic domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J6CSB6_9ROSI)

HSP 1 Score: 286 bits (733), Expect = 1.360e-80
Identity = 210/636 (33.02%), Postives = 320/636 (50.31%), Query Frame = 0
Query:    3 LWHQTLAHTSESRIRQMAQQGFIPPHSIRLTDKLSFCNSCAAAAATRVKTHRKTSCGSVKPAHPIQEIGTDVAGPFP-PDRHGNKYYRVFQCQFTKYRAIFPMKTKNDNILPHFLSFVESAKRSNPDTSIDDVAAVRLDGGGEFV--EFRNFCQDLGIELLTSGRDNPDGCRV-EPQNRIILKVVRTVLHSSDLPPQFWSEAARYAVYTLNRTVS-SDSSISPYEAFFGFPASVKHFRAFGSPCWVHLQKERRGGGKLADRATEQRFLSFENSTGVYRLLSLNTGKIVTSKHVTFNEEPVIRRALTKLPNPLAVLQSELNCSVDAKLHQ-KGNFYPRLSSTTSARPTKTPPSSTSPQQPRKSSRAPPPMLRFGYKLRAMLACSFAFLGTHSEAHTNPFNLAHAKTMSDWDMWHDAAVKEYKSLVANDVFELVERPTNKNVIKSRWVLAKKF-EDGVLK-KYKGRLVAKGYSQQPGIDYAATFAPVVSAPSLRIILSLAAEQGLSLSQLDVQTAFLNGTLTEELNMEQPEGFRDPEFPDHVWKLKKSLYGLKQSPRCWYANLHSTLREYGFTRSEYDGCIYMRKVGD-AVTYVTIYVDNIVIAFNDDRTVAALKATLKKKYRITDAGRLENFLGLKI 629
            LWH  L H SE+ + +++++G +    I    KL+FC  C      RV+  R    G       ++ I +D+ GP   P R G  Y   F   F++    F +K K+D       S  +S K      +   +  +R D G EF   EF   C+  GI    + R  P    + E  NR I++ VR +L +++LP  FW+EAA  A + +NR+ S +    +P E + G PA+    + FG P + H+       GKL  R+ +  FL ++     Y+L      K+V S+ V F+E  +       LPN L++  S    +     HQ      P++S+    R T +PP S +  + ++  + P           A L      +    +A+  P N + A +  D + W  A  +E +SL  N  ++LV+ P  K  ++ +WV  KK    GV + KYK RLVAKGYSQ PG+D+   F+PVV   S+R +L + A   L L QLDV+TAFL+G L E++ M+QPEGF   E  D+V  LKKSLYGLKQSPR WY    S +  + F RS +D C+Y +K  D +  Y+ +YVD+++IA  D   +  +KA L +++ + D G  +  LG++I
Sbjct:  334 LWHMRLGHMSENGMVELSKRGLLDGQGIC---KLNFCEHCVFGKQKRVRFTR----GIHNTKGTLEYIHSDLWGPSRVPSRGGANYMLTFIDDFSRKVWAFFLKQKSD-----VFSAFKSWKIMIEKQTGKQIKYLRTDNGLEFCSDEFNRLCKSEGIVRHLTVRHTPQQNGIAERMNRTIMEKVRCMLSNANLPKSFWAEAASTACFLINRSPSVAIEKKTPQEVWSGNPANYSDLKIFGCPAYAHVNN-----GKLEPRSIKCVFLGYKAGVKGYKLWCPENRKVVISRDVVFDETAM-------LPN-LSLKDSSNKENQKQVEHQINTESTPQVSTKIENRVTSSPPYSIAKNRTKREIKPPKKYAE------ADLVAYALNVAEDIDANQEPSNYSEAISCEDSEKWMFAMQEEMESLHKNKTWDLVKLPKGKKTVRCKWVFKKKEGTPGVEEPKYKARLVAKGYSQVPGVDFTDVFSPVVKHSSIRALLGIVAMHDLELEQLDVKTAFLHGELEEDIYMQQPEGFTVSEKEDYVCLLKKSLYGLKQSPRQWYKRFDSFMTSHDFKRSSFDSCVYFKKNNDGSFVYLLLYVDDMLIAAKDKGEIRKVKAQLSEEFEMKDLGPAKKILGMEI 938          
BLAST of mRNA_H-akashiwo_Contig118.29.1 vs. uniprot
Match: A0A1Y3EJI6_9BILA (Integrase core domain protein n=1 Tax=Trichinella nativa TaxID=6335 RepID=A0A1Y3EJI6_9BILA)

HSP 1 Score: 280 bits (715), Expect = 1.660e-80
Identity = 216/661 (32.68%), Postives = 332/661 (50.23%), Query Frame = 0
Query:    1 MDLWHQTLAHTSESRIRQMAQQGFIPPHSIRLTDKLSFCNSCAAAAATRVKTHRKT-SCGSVKPAHPIQEIGTDVAGPFP-PDRHGNKYYRVFQCQFTKYRAIFPMKTKNDNILPHFLSFVESAKRSNPDTSIDDVAAVRLDGGGEF--VEFRNFCQDLGIELLTSGRDNPDGCRV-EPQNRIILKVVRTVLHSSDLPPQFWSEAARYAVYTLNRT-VSSDSSISPYEAFFGF-PASVKHFRAFGSPCWVHLQKERRGGGKLADRATEQRFLSFENSTGVYRLLSLNTGKIVTSKHVTFNEEPVIRRALTKLP-------------NPLAV-LQSELN---------CSVDAKLHQKGNFYPRLSSTTSARPTKTPPSSTSPQQPRKSSRAPPPMLRFGYKLRAMLACSFAFLGTHSEAHTNPFNLAHAKTMS-DWDMWHDAAVKEYKSLVANDVFELVERPTNKNVIKSRWVLAKKFE-DGVLKKYKGRLVAKGYSQQPGIDYAATFAPVVSAPSLRIILSLAAEQGLSLSQLDVQTAFLNGTLTEELNMEQPEGFRDPEFPDHVWKLKKSLYGLKQSPRCWYANLHSTLREYGFTRSEYDGCIYMRKVGDAVTYVTIYVDNIVIAFNDDRTVAALKATLKKKYRITDAGRLENFLGLKI 629
            + LWH+ L H ++  ++Q+        H I++  +  FC  C        K HR++      +P  P + I  D+ GP       G+KY+ VF+  F++YR +F +K K+D +     +F+  ++     T+ + V  +  DGG EF     ++  Q  G+ + T+    P+   V E +NRI+++  R++LHS DLP   W+EA   A Y LNRT  ++    SP E +F   P S+ HF  FG+ C+VH+ K+RR   K   ++   RF+ + +    YR+   +  +IVTS+ + F  E +  R  +K+              +P A  L+ ELN         C V+ K+ Q+ +    LSS                                  ++R M      ++ T     T P +  H    S D   W  A  +E  SL  N V+ LV+ P+ K V+ SRWVL  K + DG + +YK RLVAKGY Q+PGIDY  TF+PV    ++R +LS+AA + L L Q DV+TAFL G L EE+ ++QPEGF +    + V+KL +SLYGLKQ+PRCW   L   LR+ G  +S  D C++ R    +   V IYVD+ ++A +D   +    A +KK+++I   G L+ FLG+ I
Sbjct:  171 LQLWHERLCHQNKRHVQQVLNN-----HGIKVHAQEQFCTGCVLG-----KHHRESFQSRKYRPRAPGKLIHVDLCGPMHVTSLGGSKYFLVFKDDFSRYRRVFFLKRKDD-VAQCLETFLNESR-----TAGNTVECILSDGGLEFNNAHVKDILQRRGVAMRTAMPYTPEQNGVAERENRILVETGRSMLHSKDLPLYLWAEAVNTACYVLNRTGPTTVKGKSPIELWFKRDPVSIDHFHVFGTECFVHVPKQRRR--KWEKKSVAGRFMGYCDEKDGYRIWLPDINQIVTSRDILFKPEEI--RLSSKMSVKADSSEKNEEEDDPDAEELRLELNSQWTSKEAECEVETKMEQEEDA---LSSK---------------------------------RVRKMPNYLSDYVLT---VQTPPPSSFHEAMQSVDAADWRKAMEEELHSLEENSVWTLVDPPSGKKVLDSRWVLRIKTKADGSVARYKARLVAKGYMQRPGIDYDETFSPVARFDTVRALLSIAAVERLKLQQFDVKTAFLYGALKEEVYVKQPEGFENG--TNQVYKLNRSLYGLKQAPRCWNLRLVEFLRKQGLKQSTADPCLFARMKERSKLLVAIYVDDGIVAGSDTDEMEQFLAVMKKEFQIKQ-GPLDTFLGMGI 769          
BLAST of mRNA_H-akashiwo_Contig118.29.1 vs. uniprot
Match: UPI001F00E299 (DDE-type integrase/transposase/recombinase n=1 Tax=Corynebacterium parakroppenstedtii TaxID=2828363 RepID=UPI001F00E299)

HSP 1 Score: 283 bits (724), Expect = 1.700e-80
Identity = 212/656 (32.32%), Postives = 330/656 (50.30%), Query Frame = 0
Query:    3 LWHQTLAHTSESRIRQMAQQGFIPPHSIRLTDKLSFCNSCAAAAATRVKTHRKTSCGSVKPAHPIQEIGTDVAGPFPPDRHGN-KYYRVFQCQFTKYRAIFPMKTKND--NILPHFLSFVESAKRSNPDTSIDDVAAVRLDGGGEFV--EFRNFCQDLGIELLTSGRDNPDGCRV-EPQNRIILKVVRTVLHSSDLPPQFWSEAARYAVYTLNRTVSSDSSI-SPYEAFFGFPASVKHFRAFGSPCWVHLQKERRGGGKLADRATEQRFLSFENSTGVYRLLSLNTGKIVTSKHVTFNEEPVIRRALTKLPNPLAVLQSELNCSVDAKL-----HQKGNFYPR-------LSSTTSARPTKTPPSSTSPQ----QPRKSSRAPPPMLRFGYKLRAMLACSFAFLGTHSEAHT-NPFNLAHAKTMSDWDMWHDAAVKEYKSLVANDVFELVERPTNKNVIKSRWVLAKKF----EDGVLKKYKGRLVAKGYSQQPGIDYAATFAPVVSAPSLRIILSLAAEQGLSLSQLDVQTAFLNGTLTEELNMEQPEGFRDPEFPDHVWKLKKSLYGLKQSPRCWYANLHSTLREYGFTRSEYDGCIYMRKVGD-AVTYVTIYVDNIVIAFNDDRTVAALKATLKKKYRITDAGRLENFLGLKI 629
            LWH  L H SE  ++ ++++G +  + I   + L FC  C      R K  +     S K    +  I +D  GP   +  G  +Y+  F   F++   +F MK K++       + + VE+            +  +R D G EF   EF  FC+D GI    + RD P    V E  N+ +L+ VR +L ++ L  +FW+EA     + +NR   S   + +PYE + G PA   + RAFG   + H+ +     GKL  RA    F+ +      YR+ S +  +++ S++V F+E  +        P   + + SE N +V+ ++     H +G+  P        LS T   +P  +  SS  P     +P++S+   PP  R+GY+     A   A      E  T  P     A T ++   W  A   E +SL  N  ++LV+RP  + +I  +WV  KK      +G+  KYK R+VAKG+ Q+ G+DY   F+PVV   S+R++L++ A Q L L QLDV+T FL+G L E++ M QP+GF+DPE  D+V KLKKSLYGLKQSPR WY      + E G+ RS YD C+Y  K+ + +  Y+ +YVD+++IA  +   +  LK  L  ++ + D G  +  LG++I
Sbjct:   70 LWHMRLGHMSERGMQILSKEGLLGGYKI---NDLEFCEHCVFGKLHRTKFPKAVH--STKGT--LDYIHSDCWGPSRVEAIGGYRYFVTFIDDFSRMTWVFVMKNKSEAFKCFKQWKALVENQTGKK-------IKRLRTDNGLEFCLSEFDEFCKDEGIARHHTVRDTPQQNGVAERMNQTLLERVRCMLSNAGLNRRFWAEAISTTCFLINRAPHSGIQLKTPYEMWSGKPADYSNLRAFGCTVYYHVSE-----GKLEPRAKSGVFMGYGEGVKGYRIWSPSENRVILSRNVVFDENSLFN------PTVKSTVVSE-NSTVEKQVEQQVTHDEGDELPHDEDPQHPLSET--IQPESSTSSSFQPSMARDRPKRSNFGKPPE-RYGYEDMIAYALQVA-----EEVDTYEPSTYKEAVTCTESAQWLAAMGDEMESLHKNKTWDLVQRPPGRKIITCKWVFKKKEGMTPAEGI--KYKARVVAKGFHQREGVDYNEIFSPVVRHTSIRVLLAMVAHQDLELEQLDVKTTFLHGELEEDIYMTQPDGFQDPEKEDYVCKLKKSLYGLKQSPRQWYKRFDGFMIEIGYNRSPYDCCVYHSKLKNGSYIYLVLYVDDMLIAAENKSDIQRLKGLLSAEFEMKDLGAAKKILGMEI 689          
BLAST of mRNA_H-akashiwo_Contig118.29.1 vs. uniprot
Match: A0A6S7GU81_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7GU81_PARCT)

HSP 1 Score: 284 bits (727), Expect = 2.210e-80
Identity = 202/650 (31.08%), Postives = 317/650 (48.77%), Query Frame = 0
Query:    2 DLWHQTLAHTSESRIRQMAQQGFIPPHSIRLTDKLSFCNSCAAAAATRVKTHRKTSCGSVKPAHPIQEIGTDVAGPFPPDR-HGNKYYRVFQCQFTKYRAIFPMKTKNDNILPHFLSFVESAKRSNPDTSIDDVAAVRLDGGGEFV--EFRNFCQDLGIELLTSGRDNPDGCRV-EPQNRIILKVVRTVLHSSDLPPQFWSEAARYAVYTLNR--TVSSDSSISPYEAFFGFPASVKHFRAFGSPCWVHLQKERRGGGKLADRATEQRFLSFENSTGVYRLLSLNTGKIVTSKHVTFNEEPVIRRA----LTKLPNPLAVLQSE-----------LNCSVDAKLHQKGNFYPRLSSTTSARPTKTPPSSTSPQQPRKSSRAPPPMLRFGYKLRAMLACSFAFLGTHSEAHTNPFNLAHAKTMSDWDMWHDAAVKEYKSLVANDVFELVERPTNKNVIKSRWVLAKKFE-DGVLKKYKGRLVAKGYSQQPGIDYAATFAPVVSAPSLRIILSLAAEQGLSLSQLDVQTAFLNGTLTEELNMEQPEGFRDPEFPDHVWKLKKSLYGLKQSPRCWYANLHSTLREYGFTRSEYDGCIYMRKVGDAVTYVTIYVDNIVIAFNDDRTVAALKATLKKKYRITDAGRLENFLGLKI 629
            DLWHQ   H S   +R +  Q  +     + T +  FC  CA     R    ++ +    + +  +  I +DV GP   +   GNKY+  F    +++ A++ MKTK D +L  F  +   A  +N   +   +  +R D GGE+   EF N+ ++ GI+   S    P    V E  NR I +  R+++H++ L  +FW+EA   AV   NR  TV+ D+ ++PYE F      V +F+ FG   ++H+ K+    G    R      + F+     YRL    T K+  S+ V F+E+  I++     +  L + L   Q E           +    D   H +G   P +S  T              QQPR+S+R   P  R G  +      +         +   P  +  A   SD + W  A   EY + + N+ + L   P  +  I  RWV   K+  DG ++++K RLVAKGYSQ+PG+DY  TF+PV    S+R +L++A +  L + Q+DV TAFLNG L EE+ M+QPEG+      D V KL KS+YGLKQS RCWY  +   L+  G+ +S  D C+Y+++ GD +  + +YVD+++ A N  R +   K  L+K++ +   G +   LG+++
Sbjct:  422 DLWHQRYGHLSMKNLRLLRDQKLVTGLDFQSTKESDFCEGCAQGKQKRAPFPKEQA---TRASEILGIIHSDVCGPMQENSLGGNKYFVTFIDDKSRFTAVYFMKTK-DQVLDKFKEY--EAMVTN--ITGKKIKILRSDNGGEYTSKEFVNYLKEKGIQHQLSVPRTPQQNGVAERMNRTIQETARSMIHNAGLDTKFWAEAVCTAVIVRNRCPTVAVDN-MTPYECFNDKKPDVSNFKVFGCKAYMHVLKKPERSGIRRPRNVYLLDIVFQVKG--YRLYDPKTRKLHISRDVLFDEDEFIQQKKFMQIVNLNDSLPEDQQEPQENKPSSEHVIPGDQDTVDHDEGTEEPSISRETEVE-----------QQPRRSTRIREPPDRHGVVITGNWWQNNVACINSEFSPEEPTTIREALNCSDKEQWKQALDNEYSAHIKNNTWTLGNLPEGRKAIDCRWVFKVKYNADGSVERHKARLVAKGYSQEPGLDYDETFSPVAKYTSIRSLLAIAKQLDLEVHQMDVSTAFLNGELEEEIYMKQPEGYVKEGEEDLVCKLNKSIYGLKQSSRCWYNTIDQFLKNSGYVQSSSDPCMYIKREGDDIMLIALYVDDLIPASNSKRMLHKEKEALRKRFEMKYLGEVHYCLGIQV 1049          
BLAST of mRNA_H-akashiwo_Contig118.29.1 vs. uniprot
Match: A0A2B4R8Q4_STYPI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4R8Q4_STYPI)

HSP 1 Score: 283 bits (724), Expect = 3.680e-80
Identity = 199/639 (31.14%), Postives = 314/639 (49.14%), Query Frame = 0
Query:    2 DLWHQTLAHTSESRIRQMAQQGFIPPHSIRLTDKLSFCNSCAAAAATRVKTHRKTSCGSVKPAHPIQEIGTDVAGPF-PPDRHGNKYYRVFQCQFTKYRAIFPMKTKNDNILPHFLSFVESAKRSNPDTSIDDVAAVRLDGGGEFV--EFRNFCQDLGI--ELLTSGRDNPDGCRVEPQNRIILKVVRTVLHSSDLPPQFWSEAARYAVYTLNR--TVSSDSSISPYEAFFGFPASVKHFRAFGSPCWVHLQ-KERRGGGKLADRATEQRFLSFENSTGVYRLLSLNTGKIVTSKHVTFNEEPV-IRRALTKLPNPLAVLQSELNCSVDAKLHQKGNFYPRLSSTTSARPTKTPPSSTSPQQPRKSSRAPPPMLRFGYKLRAMLACSFAF-LGTHSEAHTNPFNLAHAKTMSDWDMWHDAAVKEYKSLVANDVFELVERPTNKNVIKSRWVLAKKFE-DGVLKKYKGRLVAKGYSQQPGIDYAATFAPVVSAPSLRIILSLAAEQGLSLSQLDVQTAFLNGTLTEELNMEQPEGFRDPEFPDHVWKLKKSLYGLKQSPRCWYANLHSTLREYGFTRSEYDGCIYMRKVGDAVTYVTIYVDNIVIAFNDDRTVAALKATLKKKYRITDAGRLENFLGLKI 629
            DLWHQ L H  E R+++  +   +   +I+   +LSFC  C A    R       + G ++    +Q + +DV GP   P   G KY+  F   +++  A+  MK K++ +L  F+ F  S            +  +R D GGE++  E RN+ +  GI  EL        +G   E  NR +++  R+++  + L   FW+EA   A Y  NR  T +   + +PYE ++     V H R FG   + H+Q  ERR   KL  ++ + RF+ +  ++  YRL      K+   + V FNE     +RA+T  P+P      +                                   SP +PR+S R     +R+GY   A  A      +  H      P ++  A++      W  A   EY SL+ N  + LVE P  +  +  +WV   K   DG ++++K  LVAKGY+Q+ GIDY  TF+PVV   S+R +L+ A +  L + Q+DV+TAFLNG L EE+ M+QPEG+  P     V KL+KSLYGLKQS RCW   L   + + GF ++  D C+++RK  DA+T   ++VD+++I   +   + ++K +LK ++++ D G L  ++G+ I
Sbjct:  138 DLWHQRLGHVHELRLKKCVESESVRGINIKKITELSFCEGCLAGKMCRKPF---PAVGEIRSTRRLQLVHSDVCGPMHTPSIGGAKYFVTFIDDYSRCCAVHFMKHKSE-VLEKFVEFEASVTNDVGKA----IGTLRTDNGGEYLSTELRNYLKVKGIRHELTVPHSPQQNGV-AERMNRTLVESARSMIAHAALSDIFWAEAVSTAAYVRNRLPTTALKENETPYERWYRRKPDVGHLRVFGCMAYAHVQGSERR---KLDKKSRKIRFVGYSLTSKGYRLFDETNRKMYIRRDVEFNENDFGQKRAMTTEPDPTREEAEQXXXXXXXXXXXXXXXXXXXXD--------------SPGEPRRSVRTRKAPVRYGYNEYAKTATHRVHHVAYHLSGIDEPTSIQEARSGDHAAEWKVATDSEYNSLIENKTWRLVELPPGRKAVGCKWVFKLKHSCDGTVERFKAGLVAKGYTQKYGIDYDETFSPVVRFSSIRYLLAFAVQNDLLIHQMDVETAFLNGKLDEEIYMQQPEGYMKPGEEHLVCKLEKSLYGLKQSSRCWNKVLRECIEKIGFIQASEDPCVFIRK--DALTITGVHVDDLMILARNITEMRSVKDSLKLQFKMKDMGELHYYVGVCI 748          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig118.29.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3Y1P1_HETAK7.170e-13739.07Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A1X7U495_AMPQE3.790e-8432.07Uncharacterized protein n=1 Tax=Amphimedon queensl... [more]
A0A438FVW7_VITVI1.300e-8331.24Retrovirus-related Pol polyprotein from transposon... [more]
A0A085MW59_9BILA4.700e-8232.72Uncharacterized protein (Fragment) n=1 Tax=Trichur... [more]
A0A8K1FHK1_PYTOL1.100e-8030.85Uncharacterized protein n=3 Tax=Pythium oligandrum... [more]
A0A8J6CSB6_9ROSI1.360e-8033.02Integrase catalytic domain-containing protein n=1 ... [more]
A0A1Y3EJI6_9BILA1.660e-8032.68Integrase core domain protein n=1 Tax=Trichinella ... [more]
UPI001F00E2991.700e-8032.32DDE-type integrase/transposase/recombinase n=1 Tax... [more]
A0A6S7GU81_PARCT2.210e-8031.08Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A2B4R8Q4_STYPI3.680e-8031.14Retrovirus-related Pol polyprotein from transposon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 422..629
e-value: 2.2E-59
score: 201.0
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 60..237
e-value: 2.0E-28
score: 101.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 331..363
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 331..356
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 398..628
coord: 174..349
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 62..228
score: 12.644683
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 62..222
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 426..629

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig118contigH-akashiwo_Contig118:915211..917097 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig118.29.1mRNA_H-akashiwo_Contig118.29.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig118 915208..917097 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig118.29.1 ID=prot_H-akashiwo_Contig118.29.1|Name=mRNA_H-akashiwo_Contig118.29.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=629bp
MDLWHQTLAHTSESRIRQMAQQGFIPPHSIRLTDKLSFCNSCAAAAATRV
KTHRKTSCGSVKPAHPIQEIGTDVAGPFPPDRHGNKYYRVFQCQFTKYRA
IFPMKTKNDNILPHFLSFVESAKRSNPDTSIDDVAAVRLDGGGEFVEFRN
FCQDLGIELLTSGRDNPDGCRVEPQNRIILKVVRTVLHSSDLPPQFWSEA
ARYAVYTLNRTVSSDSSISPYEAFFGFPASVKHFRAFGSPCWVHLQKERR
GGGKLADRATEQRFLSFENSTGVYRLLSLNTGKIVTSKHVTFNEEPVIRR
ALTKLPNPLAVLQSELNCSVDAKLHQKGNFYPRLSSTTSARPTKTPPSST
SPQQPRKSSRAPPPMLRFGYKLRAMLACSFAFLGTHSEAHTNPFNLAHAK
TMSDWDMWHDAAVKEYKSLVANDVFELVERPTNKNVIKSRWVLAKKFEDG
VLKKYKGRLVAKGYSQQPGIDYAATFAPVVSAPSLRIILSLAAEQGLSLS
QLDVQTAFLNGTLTEELNMEQPEGFRDPEFPDHVWKLKKSLYGLKQSPRC
WYANLHSTLREYGFTRSEYDGCIYMRKVGDAVTYVTIYVDNIVIAFNDDR
TVAALKATLKKKYRITDAGRLENFLGLKI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR036397RNaseH_sf
IPR001584Integrase_cat-core
IPR012337RNaseH-like_sf
IPR043502DNA/RNA_pol_sf