mRNA_H-akashiwo_Contig118.29.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig118.29.1 vs. uniprot
Match: A0A7S3Y1P1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1P1_HETAK) HSP 1 Score: 436 bits (1120), Expect = 1.350e-137 Identity = 269/687 (39.16%), Postives = 386/687 (56.19%), Query Frame = 1
Query: 1 TMDLWHQTLAHTSESRIRQMAQQGFIPPHSIRLTDKLSFCNSCAAAAATRVKTHRKTSCGSVKPAHPIQEIGTDVAGPFPPDRHGNKYYRVFQCQFTKYRAIFPMKTKNDNILPHFLSFVESAKRSNPDTSIDDVAAVRLDGGGEFVEFRNFCQDLGIELLTSGRDNPDGCRV-EPQNRIILKVVRTVLHSSDLPPQFWSEAARYAVYTLNRTVSSDS-SISPYEAFFGFPASVKHFRAFGSPCWVHLQKERRGGGKLADRATEQRFLSFENSTGVYRLLSLNTGKIVTSKHVTFNEEPVI--RRALTKLPNPLA------VLQSE-----------LNCSVDAKLHQKGNFYPRLSSTTSARPTKTPPSSTSPQQP-----RKSSRAP----------------PPMLRFGYKLRAMLAC-------------SFAFLGTHSEAHTNPFNLAHAKTMSDWDMWHDAAVKEYKSLVANDVFELVERPTNKNVIKSRWVLAKKFE-DGVLKKYKGRLVAKGYSQQPGIDYAATFAPVVSAPSLRIILSLAAEQGLSLSQLDVQTAFLNGTLTEELNMEQPEGFRDPEFPDHVWKLKKSLYGLKQSPRCWYANLHSTLREYGFTRSEYDGCIYMRKVGDA-VTYVTIYVDNIVIAFNDDRTVAALKATLKKKYRITDAGRLENFLGLKI 1890
T+DLWH H SE RIR MA+ G IP SI+ TDKLSFC CA A ATR + H K V P+Q + DVAG FP D K+ + ++T++R F MK KN+ +LPH SF+ +R + S+ V +RLD G EF E FC GI L +G+DNP + E NRI+L + R VL +S L +WSEAA+Y+V+T+NRT +S S S +PY++ F AS+ H R FGS C+ H E R G KL +RA + +FLS+ Y +L+L T ++ +K V F+E V+ RA P P + +SE + A +F R+ +++ P +S S Q RKSSR+ P G ++AM+ LGTHSE NP+NLAHA+ DW W +A EY SL+ ++V+ELV++P+ N++ RW+LAKK++ DG L KYK RL A+GYSQ G+DY TF+PVVS+ SLR +L++AA + + + +D++TAFL+G L E++ M+QPEG+ P V KLKKSLYGLKQ+P+CWY NL+ L + G+TR+ YD C+Y + T +++YVD+IV+A +D ++ +K + Y ++D G +E+ LG+K+
Sbjct: 43 TIDLWHHRCVHISERRIRMMAKAGIIPASSIKATDKLSFCEDCAMAKATR-QPHSKKPRFDVA-TRPLQCLHCDVAGKFPSDSKSRKWMLIVCDEYTRFRRCFFMKHKNE-VLPHMQSFISMIQRVTQNNSLL-VENIRLDNGTEFSELAAFCDRSGILLEQTGKDNPASNGIAERSNRIVLDMTRVVLRASGLSNYYWSEAAKYSVHTINRTTTSSSRSTTPYQSLFKKKASIDHLRVFGSICYAHRPSETRPG-KLQERAVKCKFLSYNALERTYTVLNLTTHRLWVTKDVVFDERSVVDVERAPAVGPRPTTTAEFFPLFESEQASGGSSPAPTIEPGTRAAARPSRSFRGRVLESSAVHDVAGPTTSRSKPQNGDAVRRKSSRSASKQASKALSRLRRSRRPHRSVTGAIMKAMMVGINFVGGLNGVSGHQVCLLGTHSEQ--NPWNLAHAQRSPDWMRWREAVADEYDSLLRHNVWELVDKPSGANIVGCRWILAKKYDADGNLSKYKARLCAQGYSQIEGVDYTNTFSPVVSSASLRTVLTIAASEDMEIHCMDIKTAFLHGKLEEDIYMKQPEGYEVPGMEHKVLKLKKSLYGLKQAPKCWYQNLNGFLLQQGYTRNGYDSCVYSKVSSTGGKTLISVYVDDIVLASSDKSELSRIKKAISLGYNVSDMGEIESILGIKV 722
BLAST of mRNA_H-akashiwo_Contig118.29.1 vs. uniprot
Match: A0A1X7U495_AMPQE (Uncharacterized protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7U495_AMPQE) HSP 1 Score: 295 bits (754), Expect = 3.890e-84 Identity = 203/633 (32.07%), Postives = 317/633 (50.08%), Query Frame = 1
Query: 10 LWHQTLAHTSESRIRQMAQQGFIPPHSIRLTDKLSFCNSCAAAAATRVKTHRKTSCGSVKPAHPIQEIGTDVAGPFP-PDRHGNKYYRVFQCQFTKYRAIFPMKTKNDNILPHFLSFVESAKRSNPDTSIDDVAAVRLDGGGEFV--EFRNFCQDLGIELLTSGRDNPDGCRV-EPQNRIILKVVRTVLHSSDLPPQFWSEAARYAVYTLNRTVSSDS-SISPYEAFFGFPASVKHFRAFGSPCWVHLQKERRGGGKLADRATEQRFLSFENSTGVYRLLSLNTGKIVTSKHVTFNEEPVIRRALTKLPNPLAVLQSELNCSVDAKLHQKGNFYPRLSSTTSARPTKTPPSSTSPQQPRKSSRAPPPMLRFGYKLRAMLACSFAFLGTHSEAHTNPFNLAHAKTMSDWDMWHDAAVKEYKSLVANDVFELVERPTNKNVIKSRWVL-AKKFEDGVLKKYKGRLVAKGYSQQPGIDYAATFAPVVSAPSLRIILSLAAEQGLSLSQLDVQTAFLNGTLTEELNMEQPEGFRDPEFPDHVWKLKKSLYGLKQSPRCWYANLHSTLREYGFTRSEYDGCIYMRKVGDAVTYVTIYVDNIVIAFNDDRTVAALKATLKKKYRITDAGRLENFLGLKI 1890
+WHQ H SES + ++ Q + + C SC R +K G +P + ++ + +D+ GP P G KY+ F T Y I+ +K K++ F F+E + ++S+ + +R D GGE+ EF + + GI+ S NP+ V E NR +++ VR +L SS LP +FW+EA AVY NR+ + +++P+EA+ G SVKH R FG + H+ K+ R KL +A L + N+T YRL ++ S+ V F+E ++ K + ++ +S + +D +Q + + +R ++ R ++ T P ++ A T ++ + W +A +E KS+ +N V+ELVE P K I +WV K DG +++YK RLVAKG+SQQ G+DY TF+PV SLR++L+LA GL++ Q+DV TAFLNGTL EE+ M+QPEG+ + V +L SLYGLKQ+PRCW + L L+E GF ++ D CIY GD + IYVD+I++A + +K+ L + + D G L FLG+K+
Sbjct: 441 IWHQRFGHLSESGLHMLSNQKLVDDFDYNTAKSIPLCKSCIDGKHHRSPFPKK---GRTRPQNSLELVHSDICGPMKTPSLSGAKYFLTFVDDKTHYIWIYVLKQKSEA----FSKFLEWKAQVELESSLK-LKVLRTDNGGEYTSTEFNEYLKREGIKHELSVPKNPEQNGVAERLNRTLIEAVRAMLSSSTLPHRFWAEALSTAVYLKNRSYTKAVINMTPHEAWNGRRPSVKHLRVFGCTAYSHIPKDERS--KLDPKARRCILLGYSNTTKGYRLYDTKRDRVFYSRDVIFDE---MKLGFEKEQDE-SITESSNHFGIDLSSNQTDDAEDAVPDENDXXXXXXXXXXXXXXXXNXXXXGETDTVRRSHRERRRPDYYGTWIYTADAQRREPQSVTEAMTSNEREKWSEAMEREMKSIESNKVWELVELPEGKKPIGCKWVYKVKTGADGQVERYKARLVAKGFSQQYGLDYDQTFSPVARFESLRLLLALAVRNGLTVHQMDVTTAFLNGTLKEEVYMDQPEGYVEKGKEKLVCRLNHSLYGLKQAPRCWNSVLDQKLKEIGFVQTVSDPCIYKAVSGDDFI-IGIYVDDILLAGKSKERMIEVKSVLSNMFEVKDLGELNYFLGIKV 1058
BLAST of mRNA_H-akashiwo_Contig118.29.1 vs. uniprot
Match: A0A438FVW7_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Vitis vinifera TaxID=29760 RepID=A0A438FVW7_VITVI) HSP 1 Score: 295 bits (755), Expect = 1.340e-83 Identity = 204/653 (31.24%), Postives = 334/653 (51.15%), Query Frame = 1
Query: 10 LWHQTLAHTSESRIRQMAQQGFIPPHSIRLTDKLSFCNSCAAAAATRVKTHRKTSCGSVKPAHPIQEIGTDVAGPFP-PDRHGNKYYRVFQCQFTKYRAIFPMKTKND--NILPHFLSFVESAKRSNPDTSIDDVAAVRLDGGGEFV--EFRNFCQDLGIEL-LTSGRDNPDGCRVEPQNRIILKVVRTVLHSSDLPPQFWSEAARYAVYTLNRTVSSDS-SISPYEAFFGFPASVKHFRAFGSPCWVHLQKERRGGGKLADRATEQRFLSFENSTGVYRLLSLNTGKIVTSKHVTFNEEPVIRRALTKLPNPLAVLQSELNCSVDAKLHQKGNFYPRLSSTTSARPTKTPPSSTSPQQPRKSSRAPP--PMLRFGY-----------KLRAML----ACSFAFLGTHSEAHTNPFNLAHAKTMSDWDMWHDAAVKEYKSLVANDVFELVERPTNKNVIKSRWVLAKKFE-DGVLKKYKGRLVAKGYSQQPGIDYAATFAPVVSAPSLRIILSLAAEQGLSLSQLDVQTAFLNGTLTEELNMEQPEGFRDPEFPDHVWKLKKSLYGLKQSPRCWYANLHSTLREYGFTRSEYDGCIYMR-KVGDAVTYVTIYVDNIVIAFNDDRTVAALKATLKKKYRITDAGRLENFLGLKI 1890
LWH+ H + + ++ + Q+ + + +K C+ CA R + S + K ++ + TD+ GP P + NKY+ +F FT+ +F MK K++ +I F SFVE + +R D G E+ +F NFC+D G+E LT VE +N+ ++++ + +L+ LP FW+EA AVY LNR + + +P EA+ G SV+HF+ FG C+ + KERR KL + + + F+ + + + YRL +L T K++ S+ V F+E+ K+ +L +EL + GN STS P++S R+ P P + K+R++ C+ + S + + D D W A KE + N+ ++L+E+P +K +I +W+ K+ DG +++ K RLVAKGYSQQPG+D+ TFAPV ++R I+++AA++G L QLD+++AFLNG L EE+ +EQP+GF + V+KLKK+LYGLKQ+PR WY + S E GF RS+ + +Y++ K + V +YVD+++ ND++ V + + KKY ++D G L FLG+++
Sbjct: 219 LWHRRFGHLNFNSLKMLCQRKMVQGLPNTIEEKNEVCDGCALGKHHRQSFPKGVSWRAKKV---LELVHTDICGPMSTPSQGNNKYFVLFINDFTRMTWVFFMKQKSEVFSIFKKFKSFVEKQSGCY-------IKTLRSDRGMEYTSSQFGNFCEDEGVERQLTVAYTPQQNGVVERKNQTVMEMAKAMLYKKGLPKIFWAEAVNTAVYLLNRCPTKALLNKTPIEAWSGRKPSVRHFKVFGCLCYSQVPKERRS--KLDETSEKCIFMGYSSQSKGYRLYNLKTSKLIISRDVIFDEKAAWNWEEGKILKK-TILVNELQTKAPV---ETGN------------------GSTSTSSPQESPRSVPLSPSIESXXXXXXXXXXXPRKMRSLTDVYERCNLCIVEPQS----------FEEAIKDED-WRKAMEKEIDVIEKNETWQLIEKPKDKEIIGVKWIFRVKYHSDGRVQRLKARLVAKGYSQQPGVDFHETFAPVARLDTIRTIIAVAAQKGWLLYQLDIKSAFLNGKLEEEIYVEQPQGFVVDGEENKVYKLKKALYGLKQAPRAWYTQIDSYFIENGFIRSKSEPTLYVKSKDNSQILIVALYVDDLIFTGNDEKMVEKFRNEMMKKYEMSDMGLLHYFLGIEV 826
BLAST of mRNA_H-akashiwo_Contig118.29.1 vs. uniprot
Match: A0A085MW59_9BILA (Uncharacterized protein (Fragment) n=1 Tax=Trichuris suis TaxID=68888 RepID=A0A085MW59_9BILA) HSP 1 Score: 289 bits (739), Expect = 9.410e-83 Identity = 213/649 (32.82%), Postives = 323/649 (49.77%), Query Frame = 1
Query: 1 TMDLWHQTLAHTSESRIRQMAQQGFIPPHSIRLTDKLSFCNSCAAAAATRVKTHRKTSCGSVKPAHPIQEIGTDVAGPFPP-DRHGNKYYRVFQCQFTKYRAIFPMKTKNDNILPHFLSFVESAKRSNPDTSIDDVAAVRLDGGGEF--VEFRNFCQDLGIELLTSGRDNPD-GCRVEPQNRIILKVVRTVLHSSDLPPQFWSEAARYAVYTLNRT-VSSDSSISPYEAFFGF-PASVKHFRAFGSPCWVHLQKERRGGGKLADRATEQRFLSFENSTGVYRLLSLNTGKIVTSKHVTFNEEPVIRRALTKLPNP------------LAVLQSELNCSVDAKLHQKGNFYPRLSSTTSARPTKTPPSSTSPQQPRKSSRAPPPMLRFGYKLRAMLACSFAFLGTHSEAHTNPFNLAHAKTMSDWDMWHDAAVKEYKSLVANDVFELVERPTNKNVIKSRWVLAKKFE-DGVLKKYKGRLVAKGYSQQPGIDYAATFAPVVSAPSLRIILSLAAEQGLSLSQLDVQTAFLNGTLTEELNMEQPEGFRDPEFPDHVWKLKKSLYGLKQSPRCWYANLHSTLREYGFTRSEYDGCIYMRKVGDAVTYVTIYVDNIVIAFNDDRTVAALKATLKKKYRITDAGRLENFLGLKI 1890
T+ LWH+ L H ++ +R++ + I H + FC C R H + + +P P + DV GP G+KY+ VF+ F +YR +F +K K D + +FV A T+ + V V DGG EF V + Q GI + T+ P+ E +NRI+++ R++LHS LP W EA A + LNRT ++ SP E +F P + HFR FG+ C+VH+ K+RR K ++ RF+ + + YR+ T +IVTS+ V F E + + + + L++E+N + ++ + G+ + S A + P ++ P++ RK R +A L S NP A D W A +E SL N V+ LV+ P K V+ +RWV K + DG + KYK RLVAKGY Q+PGIDY+ TF+PV ++R ILS+ A + L Q DV+TAFL GTL EE+ + QPEGF D D V +L +SLYGLKQSPRCW L +++ G +S D C+++R+ + V +YVD+ ++A +D + A ++K++RIT G L++FL + I
Sbjct: 324 TLQLWHERLCHQNKRHVREVLKNCGIEVHV-----QEEFCTGCVFGKQHRGSFHVRKN----RPKVPGALVHADVCGPMENVSMSGSKYFVVFKDDFPRYRRVFFLK-KKDEVAQCLETFVNEAS-----TTGNTVKCVLCDGGLEFNNVSVKKILQQRGITMRTAMPYTPEQNGAAERENRILVETGRSMLHSKGLPIFLWDEAVNTACHVLNRTGPTTVKGKSPIELWFKRGPVRIDHFRVFGTECFVHVPKQRRR--KWDKKSVAGRFMGYCDEKDGYRVWLPGTNRIVTSRDVIFKPEETLTSVQLTVKSSSEKXXXXXNSSYVEQLKAEINSELPSEQEEAGSTFESDSRPEEA---EWEPKNSRPERQRK---------------RPKYLSDYALLTETS----NPKTFHEAMKSEDAIHWRKAMEEEMCSLQENSVWTLVDLPAGKRVVDTRWVFCVKTKVDGTVAKYKARLVAKGYVQRPGIDYSETFSPVARFDTVRTILSVGAVEKLKFQQFDVKTAFLYGTLEEEVYVRQPEGFEDG--TDRVCRLNRSLYGLKQSPRCWNKRLVEFMKKKGMKQSTADPCLFIRQGRKSKLMVVVYVDDGILAGSDTCEMELFLAEMEKEFRITK-GPLDSFLVIGI 930
BLAST of mRNA_H-akashiwo_Contig118.29.1 vs. uniprot
Match: A0A8K1FHK1_PYTOL (Uncharacterized protein n=3 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHK1_PYTOL) HSP 1 Score: 288 bits (737), Expect = 1.130e-80 Identity = 211/684 (30.85%), Postives = 339/684 (49.56%), Query Frame = 1
Query: 10 LWHQTLAHTSESRIRQMAQQGFIPPHSIRLTDKLSFCNSCAAAAATRVKTHRKTSCGSVKPAHPIQEIGTDVAGPF-PPDRHGNKYYRVFQCQFTKYRAIFPMKTKNDNILPHFLSFVESAKRSNPDTSIDDVAAVRLDGGGEF--VEFRNFCQDLGIELLTSGRDNPDGCRV-EPQNRIILKVVRTVLHSSDLPPQFWSEAARYAVYTLNR--TVSSDSSISPYEAFFGFPASVKHFRAFGSPCWVHLQKERRGGGKLADRATEQRFLSFENSTGVYRLLSLNTGKIVTSKHVTFNEEPVIRRALTKLPNPLAVLQSELNCSVDAKLHQKG-NFYP-RLSSTTSARPTKTPPS---STSPQ--QPRKSSRA--------------------PPPMLRFGYKLRAMLACSF-------------AFLGTHSE----AHTN------PFNLAHAKTMSDWDMWHDAAVKEYKSLVANDVFELVERPTNKNVIKSRWVL-AKKFEDGVLKKYKGRLVAKGYSQQPGIDYAATFAPVVSAPSLRIILSLAAEQGLSLSQLDVQTAFLNGTLTEELNMEQPEGFRDPEFPDHVWKLKKSLYGLKQSPRCWYANLHSTLREYGFTRSEYDGCIYMRKVGDAVTYVTIYVDNIVIAFNDDRTVAALKATLKKKYRITDAGRLENFLGLKI 1890
LWH L H + + ++ + + C+ CA TRV+ T+ + ++ + +DV GP P G KY+ F +++ A++ M+ K++ + F+ FV+ A+ V +R D GGE+ +F FC D GI + P+ V E NR +++ R +L + +P ++W EA + + NR T + D +SP+E + ++ + + FG +VH+ KE+R K R+ RFL + + YR L+TG+IV S+ F E+ ++ + E + +D + N P +STT+ +PT+ P T Q QP + A PP R+G R A S A L + E AH P + A SD W +A E++SL N+ +ELV P + I S+WV K+ +G++++YK RLVAKG+ Q+ G+D+ TFAPV S+RIILSLAA+ L L Q+DV+TAFLNG L EE+ M+QP+G+ DP++P+H KLK++LYGLKQSPR W + +R+ GFT+ D C+Y+++ A +V IYVD++++A N+ +AA K L +++ ++D G L+ LG+++
Sbjct: 429 LWHLRLGHIGHGGLEAIVKKNLAVGIDLGSVKQWELCSGCALGKQTRVRFQSATTD---RAKALLEVVHSDVCGPMRTPTFGGMKYFVTFIDDKSRHCAVYLMRNKSE-VFDKFVQFVKMAENQTDRR----VKMLRSDNGGEYKSAKFTKFCADRGIIQKFTPPYTPELNGVAERMNRTLVECARCMLEHAGMPNEYWGEAVTTSAFLRNRLPTRAQDLHMSPHEVWTKKKPTLANLKVFGCHAYVHVPKEKRS--KFDARSVLCRFLGYSDHEKAYRFEELSTGRIVVSRDAQFMEDTFDDGKREQVGGKTVEFRDE-DGELDGNSGDEDMNEQPAEPTSTTAEQPTRERPQWQQQTQGQRFQPLQQPNAEYPPGAKRILRTYSLEALSEPPVEKRYGRTSRTSGASSVPAPSQSSPLDDTSALLMSIEEEEEYAHVVYSVGDLPTSFKSAMESSDASQWMEACDSEFESLRKNETWELVPLPQGRKAISSKWVFKVKETAEGLIERYKARLVAKGFLQKYGVDFEETFAPVAKFTSIRIILSLAAQYKLVLHQMDVKTAFLNGLLDEEIYMKQPDGYIDPKYPNHACKLKRALYGLKQSPRMWNQTIDEFMRKIGFTKCNMDHCVYVKRNDSATMFVVIYVDDLILACNNKDLLAATKRALSERFEMSDLGELKYCLGMEV 1101
BLAST of mRNA_H-akashiwo_Contig118.29.1 vs. uniprot
Match: A0A1Y3EJI6_9BILA (Integrase core domain protein n=1 Tax=Trichinella nativa TaxID=6335 RepID=A0A1Y3EJI6_9BILA) HSP 1 Score: 280 bits (716), Expect = 1.220e-80 Identity = 216/662 (32.63%), Postives = 333/662 (50.30%), Query Frame = 1
Query: 1 TMDLWHQTLAHTSESRIRQMAQQGFIPPHSIRLTDKLSFCNSCAAAAATRVKTHRKT-SCGSVKPAHPIQEIGTDVAGPFP-PDRHGNKYYRVFQCQFTKYRAIFPMKTKNDNILPHFLSFVESAKRSNPDTSIDDVAAVRLDGGGEF--VEFRNFCQDLGIELLTSGRDNPDGCRV-EPQNRIILKVVRTVLHSSDLPPQFWSEAARYAVYTLNRT-VSSDSSISPYEAFFGF-PASVKHFRAFGSPCWVHLQKERRGGGKLADRATEQRFLSFENSTGVYRLLSLNTGKIVTSKHVTFNEEPVIRRALTKLP-------------NPLAV-LQSELN---------CSVDAKLHQKGNFYPRLSSTTSARPTKTPPSSTSPQQPRKSSRAPPPMLRFGYKLRAMLACSFAFLGTHSEAHTNPFNLAHAKTMS-DWDMWHDAAVKEYKSLVANDVFELVERPTNKNVIKSRWVLAKKFE-DGVLKKYKGRLVAKGYSQQPGIDYAATFAPVVSAPSLRIILSLAAEQGLSLSQLDVQTAFLNGTLTEELNMEQPEGFRDPEFPDHVWKLKKSLYGLKQSPRCWYANLHSTLREYGFTRSEYDGCIYMRKVGDAVTYVTIYVDNIVIAFNDDRTVAALKATLKKKYRITDAGRLENFLGLKI 1890
++ LWH+ L H ++ ++Q+ H I++ + FC C K HR++ +P P + I D+ GP G+KY+ VF+ F++YR +F +K K+D + +F+ ++ T+ + V + DGG EF ++ Q G+ + T+ P+ V E +NRI+++ R++LHS DLP W+EA A Y LNRT ++ SP E +F P S+ HF FG+ C+VH+ K+RR K ++ RF+ + + YR+ + +IVTS+ + F E + R +K+ +P A L+ ELN C V+ K+ Q+ + LSS ++R M ++ T T P + H S D W A +E SL N V+ LV+ P+ K V+ SRWVL K + DG + +YK RLVAKGY Q+PGIDY TF+PV ++R +LS+AA + L L Q DV+TAFL G L EE+ ++QPEGF + + V+KL +SLYGLKQ+PRCW L LR+ G +S D C++ R + V IYVD+ ++A +D + A +KK+++I G L+ FLG+ I
Sbjct: 170 SLQLWHERLCHQNKRHVQQVLNN-----HGIKVHAQEQFCTGCVLG-----KHHRESFQSRKYRPRAPGKLIHVDLCGPMHVTSLGGSKYFLVFKDDFSRYRRVFFLKRKDD-VAQCLETFLNESR-----TAGNTVECILSDGGLEFNNAHVKDILQRRGVAMRTAMPYTPEQNGVAERENRILVETGRSMLHSKDLPLYLWAEAVNTACYVLNRTGPTTVKGKSPIELWFKRDPVSIDHFHVFGTECFVHVPKQRRR--KWEKKSVAGRFMGYCDEKDGYRIWLPDINQIVTSRDILFKPEEI--RLSSKMSVKADSSEKNEEEDDPDAEELRLELNSQWTSKEAECEVETKMEQEEDA---LSSK---------------------------------RVRKMPNYLSDYVLT---VQTPPPSSFHEAMQSVDAADWRKAMEEELHSLEENSVWTLVDPPSGKKVLDSRWVLRIKTKADGSVARYKARLVAKGYMQRPGIDYDETFSPVARFDTVRALLSIAAVERLKLQQFDVKTAFLYGALKEEVYVKQPEGFENG--TNQVYKLNRSLYGLKQAPRCWNLRLVEFLRKQGLKQSTADPCLFARMKERSKLLVAIYVDDGIVAGSDTDEMEQFLAVMKKEFQIKQ-GPLDTFLGMGI 769
BLAST of mRNA_H-akashiwo_Contig118.29.1 vs. uniprot
Match: A0A8J6CSB6_9ROSI (Integrase catalytic domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J6CSB6_9ROSI) HSP 1 Score: 286 bits (733), Expect = 1.390e-80 Identity = 210/636 (33.02%), Postives = 320/636 (50.31%), Query Frame = 1
Query: 10 LWHQTLAHTSESRIRQMAQQGFIPPHSIRLTDKLSFCNSCAAAAATRVKTHRKTSCGSVKPAHPIQEIGTDVAGPFP-PDRHGNKYYRVFQCQFTKYRAIFPMKTKNDNILPHFLSFVESAKRSNPDTSIDDVAAVRLDGGGEFV--EFRNFCQDLGIELLTSGRDNPDGCRV-EPQNRIILKVVRTVLHSSDLPPQFWSEAARYAVYTLNRTVS-SDSSISPYEAFFGFPASVKHFRAFGSPCWVHLQKERRGGGKLADRATEQRFLSFENSTGVYRLLSLNTGKIVTSKHVTFNEEPVIRRALTKLPNPLAVLQSELNCSVDAKLHQ-KGNFYPRLSSTTSARPTKTPPSSTSPQQPRKSSRAPPPMLRFGYKLRAMLACSFAFLGTHSEAHTNPFNLAHAKTMSDWDMWHDAAVKEYKSLVANDVFELVERPTNKNVIKSRWVLAKKF-EDGVLK-KYKGRLVAKGYSQQPGIDYAATFAPVVSAPSLRIILSLAAEQGLSLSQLDVQTAFLNGTLTEELNMEQPEGFRDPEFPDHVWKLKKSLYGLKQSPRCWYANLHSTLREYGFTRSEYDGCIYMRKVGD-AVTYVTIYVDNIVIAFNDDRTVAALKATLKKKYRITDAGRLENFLGLKI 1890
LWH L H SE+ + +++++G + I KL+FC C RV+ R G ++ I +D+ GP P R G Y F F++ F +K K+D S +S K + + +R D G EF EF C+ GI + R P + E NR I++ VR +L +++LP FW+EAA A + +NR+ S + +P E + G PA+ + FG P + H+ GKL R+ + FL ++ Y+L K+V S+ V F+E + LPN L++ S + HQ P++S+ R T +PP S + + ++ + P A L + +A+ P N + A + D + W A +E +SL N ++LV+ P K ++ +WV KK GV + KYK RLVAKGYSQ PG+D+ F+PVV S+R +L + A L L QLDV+TAFL+G L E++ M+QPEGF E D+V LKKSLYGLKQSPR WY S + + F RS +D C+Y +K D + Y+ +YVD+++IA D + +KA L +++ + D G + LG++I
Sbjct: 334 LWHMRLGHMSENGMVELSKRGLLDGQGIC---KLNFCEHCVFGKQKRVRFTR----GIHNTKGTLEYIHSDLWGPSRVPSRGGANYMLTFIDDFSRKVWAFFLKQKSD-----VFSAFKSWKIMIEKQTGKQIKYLRTDNGLEFCSDEFNRLCKSEGIVRHLTVRHTPQQNGIAERMNRTIMEKVRCMLSNANLPKSFWAEAASTACFLINRSPSVAIEKKTPQEVWSGNPANYSDLKIFGCPAYAHVNN-----GKLEPRSIKCVFLGYKAGVKGYKLWCPENRKVVISRDVVFDETAM-------LPN-LSLKDSSNKENQKQVEHQINTESTPQVSTKIENRVTSSPPYSIAKNRTKREIKPPKKYAE------ADLVAYALNVAEDIDANQEPSNYSEAISCEDSEKWMFAMQEEMESLHKNKTWDLVKLPKGKKTVRCKWVFKKKEGTPGVEEPKYKARLVAKGYSQVPGVDFTDVFSPVVKHSSIRALLGIVAMHDLELEQLDVKTAFLHGELEEDIYMQQPEGFTVSEKEDYVCLLKKSLYGLKQSPRQWYKRFDSFMTSHDFKRSSFDSCVYFKKNNDGSFVYLLLYVDDMLIAAKDKGEIRKVKAQLSEEFEMKDLGPAKKILGMEI 938
BLAST of mRNA_H-akashiwo_Contig118.29.1 vs. uniprot
Match: UPI001F00E299 (DDE-type integrase/transposase/recombinase n=1 Tax=Corynebacterium parakroppenstedtii TaxID=2828363 RepID=UPI001F00E299) HSP 1 Score: 283 bits (724), Expect = 1.750e-80 Identity = 212/656 (32.32%), Postives = 330/656 (50.30%), Query Frame = 1
Query: 10 LWHQTLAHTSESRIRQMAQQGFIPPHSIRLTDKLSFCNSCAAAAATRVKTHRKTSCGSVKPAHPIQEIGTDVAGPFPPDRHGN-KYYRVFQCQFTKYRAIFPMKTKND--NILPHFLSFVESAKRSNPDTSIDDVAAVRLDGGGEFV--EFRNFCQDLGIELLTSGRDNPDGCRV-EPQNRIILKVVRTVLHSSDLPPQFWSEAARYAVYTLNRTVSSDSSI-SPYEAFFGFPASVKHFRAFGSPCWVHLQKERRGGGKLADRATEQRFLSFENSTGVYRLLSLNTGKIVTSKHVTFNEEPVIRRALTKLPNPLAVLQSELNCSVDAKL-----HQKGNFYPR-------LSSTTSARPTKTPPSSTSPQ----QPRKSSRAPPPMLRFGYKLRAMLACSFAFLGTHSEAHT-NPFNLAHAKTMSDWDMWHDAAVKEYKSLVANDVFELVERPTNKNVIKSRWVLAKKF----EDGVLKKYKGRLVAKGYSQQPGIDYAATFAPVVSAPSLRIILSLAAEQGLSLSQLDVQTAFLNGTLTEELNMEQPEGFRDPEFPDHVWKLKKSLYGLKQSPRCWYANLHSTLREYGFTRSEYDGCIYMRKVGD-AVTYVTIYVDNIVIAFNDDRTVAALKATLKKKYRITDAGRLENFLGLKI 1890
LWH L H SE ++ ++++G + + I + L FC C R K + S K + I +D GP + G +Y+ F F++ +F MK K++ + + VE+ + +R D G EF EF FC+D GI + RD P V E N+ +L+ VR +L ++ L +FW+EA + +NR S + +PYE + G PA + RAFG + H+ + GKL RA F+ + YR+ S + +++ S++V F+E + P + + SE N +V+ ++ H +G+ P LS T +P + SS P +P++S+ PP R+GY+ A A E T P A T ++ W A E +SL N ++LV+RP + +I +WV KK +G+ KYK R+VAKG+ Q+ G+DY F+PVV S+R++L++ A Q L L QLDV+T FL+G L E++ M QP+GF+DPE D+V KLKKSLYGLKQSPR WY + E G+ RS YD C+Y K+ + + Y+ +YVD+++IA + + LK L ++ + D G + LG++I
Sbjct: 70 LWHMRLGHMSERGMQILSKEGLLGGYKI---NDLEFCEHCVFGKLHRTKFPKAVH--STKGT--LDYIHSDCWGPSRVEAIGGYRYFVTFIDDFSRMTWVFVMKNKSEAFKCFKQWKALVENQTGKK-------IKRLRTDNGLEFCLSEFDEFCKDEGIARHHTVRDTPQQNGVAERMNQTLLERVRCMLSNAGLNRRFWAEAISTTCFLINRAPHSGIQLKTPYEMWSGKPADYSNLRAFGCTVYYHVSE-----GKLEPRAKSGVFMGYGEGVKGYRIWSPSENRVILSRNVVFDENSLFN------PTVKSTVVSE-NSTVEKQVEQQVTHDEGDELPHDEDPQHPLSET--IQPESSTSSSFQPSMARDRPKRSNFGKPPE-RYGYEDMIAYALQVA-----EEVDTYEPSTYKEAVTCTESAQWLAAMGDEMESLHKNKTWDLVQRPPGRKIITCKWVFKKKEGMTPAEGI--KYKARVVAKGFHQREGVDYNEIFSPVVRHTSIRVLLAMVAHQDLELEQLDVKTTFLHGELEEDIYMTQPDGFQDPEKEDYVCKLKKSLYGLKQSPRQWYKRFDGFMIEIGYNRSPYDCCVYHSKLKNGSYIYLVLYVDDMLIAAENKSDIQRLKGLLSAEFEMKDLGAAKKILGMEI 689
BLAST of mRNA_H-akashiwo_Contig118.29.1 vs. uniprot
Match: A0A6S7GU81_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7GU81_PARCT) HSP 1 Score: 284 bits (727), Expect = 2.270e-80 Identity = 202/650 (31.08%), Postives = 317/650 (48.77%), Query Frame = 1
Query: 7 DLWHQTLAHTSESRIRQMAQQGFIPPHSIRLTDKLSFCNSCAAAAATRVKTHRKTSCGSVKPAHPIQEIGTDVAGPFPPDR-HGNKYYRVFQCQFTKYRAIFPMKTKNDNILPHFLSFVESAKRSNPDTSIDDVAAVRLDGGGEFV--EFRNFCQDLGIELLTSGRDNPDGCRV-EPQNRIILKVVRTVLHSSDLPPQFWSEAARYAVYTLNR--TVSSDSSISPYEAFFGFPASVKHFRAFGSPCWVHLQKERRGGGKLADRATEQRFLSFENSTGVYRLLSLNTGKIVTSKHVTFNEEPVIRRA----LTKLPNPLAVLQSE-----------LNCSVDAKLHQKGNFYPRLSSTTSARPTKTPPSSTSPQQPRKSSRAPPPMLRFGYKLRAMLACSFAFLGTHSEAHTNPFNLAHAKTMSDWDMWHDAAVKEYKSLVANDVFELVERPTNKNVIKSRWVLAKKFE-DGVLKKYKGRLVAKGYSQQPGIDYAATFAPVVSAPSLRIILSLAAEQGLSLSQLDVQTAFLNGTLTEELNMEQPEGFRDPEFPDHVWKLKKSLYGLKQSPRCWYANLHSTLREYGFTRSEYDGCIYMRKVGDAVTYVTIYVDNIVIAFNDDRTVAALKATLKKKYRITDAGRLENFLGLKI 1890
DLWHQ H S +R + Q + + T + FC CA R ++ + + + + I +DV GP + GNKY+ F +++ A++ MKTK D +L F + A +N + + +R D GGE+ EF N+ ++ GI+ S P V E NR I + R+++H++ L +FW+EA AV NR TV+ D+ ++PYE F V +F+ FG ++H+ K+ G R + F+ YRL T K+ S+ V F+E+ I++ + L + L Q E + D H +G P +S T QQPR+S+R P R G + + + P + A SD + W A EY + + N+ + L P + I RWV K+ DG ++++K RLVAKGYSQ+PG+DY TF+PV S+R +L++A + L + Q+DV TAFLNG L EE+ M+QPEG+ D V KL KS+YGLKQS RCWY + L+ G+ +S D C+Y+++ GD + + +YVD+++ A N R + K L+K++ + G + LG+++
Sbjct: 422 DLWHQRYGHLSMKNLRLLRDQKLVTGLDFQSTKESDFCEGCAQGKQKRAPFPKEQA---TRASEILGIIHSDVCGPMQENSLGGNKYFVTFIDDKSRFTAVYFMKTK-DQVLDKFKEY--EAMVTN--ITGKKIKILRSDNGGEYTSKEFVNYLKEKGIQHQLSVPRTPQQNGVAERMNRTIQETARSMIHNAGLDTKFWAEAVCTAVIVRNRCPTVAVDN-MTPYECFNDKKPDVSNFKVFGCKAYMHVLKKPERSGIRRPRNVYLLDIVFQVKG--YRLYDPKTRKLHISRDVLFDEDEFIQQKKFMQIVNLNDSLPEDQQEPQENKPSSEHVIPGDQDTVDHDEGTEEPSISRETEVE-----------QQPRRSTRIREPPDRHGVVITGNWWQNNVACINSEFSPEEPTTIREALNCSDKEQWKQALDNEYSAHIKNNTWTLGNLPEGRKAIDCRWVFKVKYNADGSVERHKARLVAKGYSQEPGLDYDETFSPVAKYTSIRSLLAIAKQLDLEVHQMDVSTAFLNGELEEEIYMKQPEGYVKEGEEDLVCKLNKSIYGLKQSSRCWYNTIDQFLKNSGYVQSSSDPCMYIKREGDDIMLIALYVDDLIPASNSKRMLHKEKEALRKRFEMKYLGEVHYCLGIQV 1049
BLAST of mRNA_H-akashiwo_Contig118.29.1 vs. uniprot
Match: A0A2B4R8Q4_STYPI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4R8Q4_STYPI) HSP 1 Score: 283 bits (724), Expect = 3.780e-80 Identity = 199/639 (31.14%), Postives = 314/639 (49.14%), Query Frame = 1
Query: 7 DLWHQTLAHTSESRIRQMAQQGFIPPHSIRLTDKLSFCNSCAAAAATRVKTHRKTSCGSVKPAHPIQEIGTDVAGPF-PPDRHGNKYYRVFQCQFTKYRAIFPMKTKNDNILPHFLSFVESAKRSNPDTSIDDVAAVRLDGGGEFV--EFRNFCQDLGI--ELLTSGRDNPDGCRVEPQNRIILKVVRTVLHSSDLPPQFWSEAARYAVYTLNR--TVSSDSSISPYEAFFGFPASVKHFRAFGSPCWVHLQ-KERRGGGKLADRATEQRFLSFENSTGVYRLLSLNTGKIVTSKHVTFNEEPV-IRRALTKLPNPLAVLQSELNCSVDAKLHQKGNFYPRLSSTTSARPTKTPPSSTSPQQPRKSSRAPPPMLRFGYKLRAMLACSFAF-LGTHSEAHTNPFNLAHAKTMSDWDMWHDAAVKEYKSLVANDVFELVERPTNKNVIKSRWVLAKKFE-DGVLKKYKGRLVAKGYSQQPGIDYAATFAPVVSAPSLRIILSLAAEQGLSLSQLDVQTAFLNGTLTEELNMEQPEGFRDPEFPDHVWKLKKSLYGLKQSPRCWYANLHSTLREYGFTRSEYDGCIYMRKVGDAVTYVTIYVDNIVIAFNDDRTVAALKATLKKKYRITDAGRLENFLGLKI 1890
DLWHQ L H E R+++ + + +I+ +LSFC C A R + G ++ +Q + +DV GP P G KY+ F +++ A+ MK K++ +L F+ F S + +R D GGE++ E RN+ + GI EL +G E NR +++ R+++ + L FW+EA A Y NR T + + +PYE ++ V H R FG + H+Q ERR KL ++ + RF+ + ++ YRL K+ + V FNE +RA+T P+P + SP +PR+S R +R+GY A A + H P ++ A++ W A EY SL+ N + LVE P + + +WV K DG ++++K LVAKGY+Q+ GIDY TF+PVV S+R +L+ A + L + Q+DV+TAFLNG L EE+ M+QPEG+ P V KL+KSLYGLKQS RCW L + + GF ++ D C+++RK DA+T ++VD+++I + + ++K +LK ++++ D G L ++G+ I
Sbjct: 138 DLWHQRLGHVHELRLKKCVESESVRGINIKKITELSFCEGCLAGKMCRKPF---PAVGEIRSTRRLQLVHSDVCGPMHTPSIGGAKYFVTFIDDYSRCCAVHFMKHKSE-VLEKFVEFEASVTNDVGKA----IGTLRTDNGGEYLSTELRNYLKVKGIRHELTVPHSPQQNGV-AERMNRTLVESARSMIAHAALSDIFWAEAVSTAAYVRNRLPTTALKENETPYERWYRRKPDVGHLRVFGCMAYAHVQGSERR---KLDKKSRKIRFVGYSLTSKGYRLFDETNRKMYIRRDVEFNENDFGQKRAMTTEPDPTREEAEQXXXXXXXXXXXXXXXXXXXXD--------------SPGEPRRSVRTRKAPVRYGYNEYAKTATHRVHHVAYHLSGIDEPTSIQEARSGDHAAEWKVATDSEYNSLIENKTWRLVELPPGRKAVGCKWVFKLKHSCDGTVERFKAGLVAKGYTQKYGIDYDETFSPVVRFSSIRYLLAFAVQNDLLIHQMDVETAFLNGKLDEEIYMQQPEGYMKPGEEHLVCKLEKSLYGLKQSSRCWNKVLRECIEKIGFIQASEDPCVFIRK--DALTITGVHVDDLMILARNITEMRSVKDSLKLQFKMKDMGELHYYVGVCI 748 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig118.29.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig118.29.1 >prot_H-akashiwo_Contig118.29.1 ID=prot_H-akashiwo_Contig118.29.1|Name=mRNA_H-akashiwo_Contig118.29.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=629bp MDLWHQTLAHTSESRIRQMAQQGFIPPHSIRLTDKLSFCNSCAAAAATRVback to top mRNA from alignment at H-akashiwo_Contig118:915208..917097+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig118.29.1 ID=mRNA_H-akashiwo_Contig118.29.1|Name=mRNA_H-akashiwo_Contig118.29.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1890bp|location=Sequence derived from alignment at H-akashiwo_Contig118:915208..917097+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig118:915208..917097+ >mRNA_H-akashiwo_Contig118.29.1 ID=mRNA_H-akashiwo_Contig118.29.1|Name=mRNA_H-akashiwo_Contig118.29.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=1887bp|location=Sequence derived from alignment at H-akashiwo_Contig118:915208..917097+ (Heterosigma akashiwo CCMP452)back to top |