prot_H-akashiwo_Contig118.23.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig118.23.1
Unique Nameprot_H-akashiwo_Contig118.23.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length74
Homology
BLAST of mRNA_H-akashiwo_Contig118.23.1 vs. uniprot
Match: A0A024FW00_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FW00_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 2.060e-7
Identity = 26/38 (68.42%), Postives = 31/38 (81.58%), Query Frame = 0
Query:   31 VSAEAKQLLAYIGRYVPKDIELEAHLKPFVPEYIPAVN 68
            VSAE ++L  YIGRY P++IELEA LK F+PEYIPAV 
Sbjct:  141 VSAEVRELFQYIGRYKPQEIELEAQLKCFIPEYIPAVG 178          
BLAST of mRNA_H-akashiwo_Contig118.23.1 vs. uniprot
Match: A0A7R9UW76_DIALT (Hypothetical protein (Fragment) n=3 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9UW76_DIALT)

HSP 1 Score: 55.8 bits (133), Expect = 2.520e-7
Identity = 26/46 (56.52%), Postives = 34/46 (73.91%), Query Frame = 0
Query:   23 PAGMDLPHVSAEAKQLLAYIGRYVPKDIELEAHLKPFVPEYIPAVN 68
            PA  +  +VS+E K+L  YIGRY P +IELE  +KPF+P+YIPAV 
Sbjct:  269 PAEYENLNVSSEIKELFQYIGRYKPHNIELETKMKPFIPDYIPAVG 314          
BLAST of mRNA_H-akashiwo_Contig118.23.1 vs. uniprot
Match: A0A024G528_9STRA (Fcf2 domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G528_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 2.580e-7
Identity = 26/38 (68.42%), Postives = 31/38 (81.58%), Query Frame = 0
Query:   31 VSAEAKQLLAYIGRYVPKDIELEAHLKPFVPEYIPAVN 68
            VSAE ++L  YIGRY P++IELEA LK F+PEYIPAV 
Sbjct:  698 VSAEVRELFQYIGRYKPQEIELEAQLKCFIPEYIPAVG 735          
BLAST of mRNA_H-akashiwo_Contig118.23.1 vs. uniprot
Match: UPI001F085220 (intraflagellar transport protein 46 homolog isoform X1 n=2 Tax=Hypomesus transpacificus TaxID=137520 RepID=UPI001F085220)

HSP 1 Score: 55.1 bits (131), Expect = 4.540e-7
Identity = 28/52 (53.85%), Postives = 35/52 (67.31%), Query Frame = 0
Query:   17 PEKLSVPAGMDLPHVSAEAKQLLAYIGRYVPKDIELEAHLKPFVPEYIPAVN 68
            PE    PA  D   VSAE K+L  YI RY P++IEL+  LKPF+P++IPAV 
Sbjct:  112 PEGAYDPADYDHVPVSAEIKELFQYITRYTPQNIELDHKLKPFIPDFIPAVG 163          
BLAST of mRNA_H-akashiwo_Contig118.23.1 vs. uniprot
Match: A0A183WYI4_TRIRE (Intraflagellar transport protein 46 homolog n=1 Tax=Trichobilharzia regenti TaxID=157069 RepID=A0A183WYI4_TRIRE)

HSP 1 Score: 52.0 bits (123), Expect = 9.230e-7
Identity = 24/46 (52.17%), Postives = 32/46 (69.57%), Query Frame = 0
Query:   23 PAGMDLPHVSAEAKQLLAYIGRYVPKDIELEAHLKPFVPEYIPAVN 68
            PA  +   VS+E K++  YI RY P+ IELE  LKPF+P+Y+PAV 
Sbjct:    9 PADFEHLAVSSEIKEIFEYIQRYTPQTIELETKLKPFIPDYMPAVG 54          
BLAST of mRNA_H-akashiwo_Contig118.23.1 vs. uniprot
Match: L1IU53_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IU53_GUITC)

HSP 1 Score: 53.5 bits (127), Expect = 1.040e-6
Identity = 24/38 (63.16%), Postives = 29/38 (76.32%), Query Frame = 0
Query:   31 VSAEAKQLLAYIGRYVPKDIELEAHLKPFVPEYIPAVN 68
            VS E ++L  YIGRY P+ IELE  LKPF+PEYIPA+ 
Sbjct:   14 VSDEIRELFQYIGRYKPQTIELETKLKPFIPEYIPAIG 51          
BLAST of mRNA_H-akashiwo_Contig118.23.1 vs. uniprot
Match: A0A813YN72_ADIRI (Intraflagellar transport protein 46 homolog (Fragment) n=2 Tax=Adineta ricciae TaxID=249248 RepID=A0A813YN72_ADIRI)

HSP 1 Score: 53.9 bits (128), Expect = 1.100e-6
Identity = 29/53 (54.72%), Postives = 33/53 (62.26%), Query Frame = 0
Query:   16 DPEKLSVPAGMDLPHVSAEAKQLLAYIGRYVPKDIELEAHLKPFVPEYIPAVN 68
            DP         DLP VSAE K L  YI +Y P+DI LE  LKPFVPEY+PA+ 
Sbjct:  145 DPNAYDPKMYRDLP-VSAEIKDLFKYIDKYQPQDIILETKLKPFVPEYVPAIG 196          
BLAST of mRNA_H-akashiwo_Contig118.23.1 vs. uniprot
Match: A0A814B7K1_ADIRI (Intraflagellar transport protein 46 homolog n=1 Tax=Adineta ricciae TaxID=249248 RepID=A0A814B7K1_ADIRI)

HSP 1 Score: 53.9 bits (128), Expect = 1.180e-6
Identity = 29/53 (54.72%), Postives = 33/53 (62.26%), Query Frame = 0
Query:   16 DPEKLSVPAGMDLPHVSAEAKQLLAYIGRYVPKDIELEAHLKPFVPEYIPAVN 68
            DP         DLP VSAE K L  YI +Y P+DI LE  LKPFVPEY+PA+ 
Sbjct:  109 DPNAYDPKMYRDLP-VSAEIKDLFKYIDKYQPQDIILETKLKPFVPEYVPAIG 160          
BLAST of mRNA_H-akashiwo_Contig118.23.1 vs. uniprot
Match: A0A504YQ64_FASGI (Intraflagellar transport protein 46 homolog n=3 Tax=Fasciolidae TaxID=27843 RepID=A0A504YQ64_FASGI)

HSP 1 Score: 53.5 bits (127), Expect = 1.570e-6
Identity = 26/46 (56.52%), Postives = 32/46 (69.57%), Query Frame = 0
Query:   23 PAGMDLPHVSAEAKQLLAYIGRYVPKDIELEAHLKPFVPEYIPAVN 68
            PA  +   VSAE K++  YI RY P+ IELE HLKPF+P+YI AV 
Sbjct:  113 PADYEHLAVSAEIKEMFEYIQRYTPQVIELETHLKPFIPDYIAAVG 158          
BLAST of mRNA_H-akashiwo_Contig118.23.1 vs. uniprot
Match: A0A835XW09_9CHLO (Uncharacterized protein n=2 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XW09_9CHLO)

HSP 1 Score: 53.5 bits (127), Expect = 1.580e-6
Identity = 22/40 (55.00%), Postives = 31/40 (77.50%), Query Frame = 0
Query:   30 HVSAEAKQLLAYIGRYVPKDIELEAHLKPFVPEYIPAVNG 69
            +V  + ++L +YIGRY P+ +ELE  LKPF+P+YIPAV G
Sbjct:  107 NVPDDVRELFSYIGRYKPQTVELETKLKPFIPDYIPAVGG 146          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig118.23.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A024FW00_9STRA2.060e-768.42Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
A0A7R9UW76_DIALT2.520e-756.52Hypothetical protein (Fragment) n=3 Tax=Diacronema... [more]
A0A024G528_9STRA2.580e-768.42Fcf2 domain-containing protein n=1 Tax=Albugo cand... [more]
UPI001F0852204.540e-753.85intraflagellar transport protein 46 homolog isofor... [more]
A0A183WYI4_TRIRE9.230e-752.17Intraflagellar transport protein 46 homolog n=1 Ta... [more]
L1IU53_GUITC1.040e-663.16Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A813YN72_ADIRI1.100e-654.72Intraflagellar transport protein 46 homolog (Fragm... [more]
A0A814B7K1_ADIRI1.180e-654.72Intraflagellar transport protein 46 homolog n=1 Ta... [more]
A0A504YQ64_FASGI1.570e-656.52Intraflagellar transport protein 46 homolog n=3 Ta... [more]
A0A835XW09_9CHLO1.580e-655.00Uncharacterized protein n=2 Tax=Edaphochlamys deba... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022088Intraflagellar transport complex B protein 46PFAMPF12317IFT46_B_Ccoord: 29..67
e-value: 1.1E-12
score: 48.1
IPR022088Intraflagellar transport complex B protein 46PANTHERPTHR13376UNCHARACTERIZEDcoord: 7..67
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..27
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig118contigH-akashiwo_Contig118:705513..705734 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig118.23.1mRNA_H-akashiwo_Contig118.23.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig118 705513..705734 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig118.23.1 ID=prot_H-akashiwo_Contig118.23.1|Name=mRNA_H-akashiwo_Contig118.23.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=74bp
MGHADDKIENEENKEDPEKLSVPAGMDLPHVSAEAKQLLAYIGRYVPKDI
ELEAHLKPFVPEYIPAVNGPPLEV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022088Intraflagellar_transp_cmplxB