prot_H-akashiwo_Contig1175.3.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-akashiwo_Contig1175.3.1
Unique Name	prot_H-akashiwo_Contig1175.3.1
Type	polypeptide
Organism	Heterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length	124

Homology

[Close]

BLAST of mRNA_H-akashiwo_Contig1175.3.1 vs. uniprot
Match: A0A7S3XVA0_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVA0_HETAK)

HSP 1 Score: 188 bits (477), Expect = 4.050e-55
Identity = 86/123 (69.92%), Postives = 105/123 (85.37%), Query Frame = 0

Query:    1 SQVPWLGHIITREGIKPDPKKIEAVKGMRRPASKKQVRQFLGLASYYRQFVEGFSEIAKPLYQLTKDTPKGVEWTDDCEWSWQTLKDKLVSTPILIYPRFDRPFIVETDASGQGLGAVLSQET 123
            +Q+P+LGH+ +REG+KPDPKKIEAV+ +RRP SKKQVRQ LGLASYYRQFV  F+ IA PLY+LTKD PKGV W DDCEW++Q +KD L S P+L+YPR+D+PFIVETDAS  GLGA+L Q+T
Sbjct:  292 AQIPFLGHLASREGLKPDPKKIEAVRKLRRPESKKQVRQLLGLASYYRQFVPNFASIAAPLYKLTKDKPKGVLWDDDCEWAFQEIKDSLTSAPVLMYPRWDKPFIVETDASKTGLGAILLQQT 414

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BLAST of mRNA_H-akashiwo_Contig1175.3.1 vs. uniprot
Match: A0A7S3XU57_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XU57_HETAK)

HSP 1 Score: 183 bits (464), Expect = 5.500e-55
Identity = 85/123 (69.11%), Postives = 102/123 (82.93%), Query Frame = 0

Query:    1 SQVPWLGHIITREGIKPDPKKIEAVKGMRRPASKKQVRQFLGLASYYRQFVEGFSEIAKPLYQLTKDTPKGVEWTDDCEWSWQTLKDKLVSTPILIYPRFDRPFIVETDASGQGLGAVLSQET 123
            +QVP+LGHI TREG+KPDPKKIEA+K ++RP +KKQVRQ LGLASYYRQFV  F+  A PLY LTK  PKGVEWTDDCEW++Q LKD L + PILI+P F++ F +ETDAS  GLGA+LSQ+T
Sbjct:  154 AQVPFLGHIATREGLKPDPKKIEAIKKLQRPQTKKQVRQVLGLASYYRQFVPNFAATAAPLYTLTKKEPKGVEWTDDCEWAFQNLKDTLTTAPILIFPNFNKEFTIETDASKHGLGAILSQDT 276

[Close]

BLAST of mRNA_H-akashiwo_Contig1175.3.1 vs. uniprot
Match: A0A7S3XV63_HETAK (Hypothetical protein (Fragment) n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XV63_HETAK)

HSP 1 Score: 188 bits (477), Expect = 8.010e-54
Identity = 86/123 (69.92%), Postives = 105/123 (85.37%), Query Frame = 0

Query:    1 SQVPWLGHIITREGIKPDPKKIEAVKGMRRPASKKQVRQFLGLASYYRQFVEGFSEIAKPLYQLTKDTPKGVEWTDDCEWSWQTLKDKLVSTPILIYPRFDRPFIVETDASGQGLGAVLSQET 123
            +Q+P+LGH+ +REG+KPDPKKIEAV+ +RRP SKKQVRQ LGLASYYRQFV  F+ IA PLY+LTKD PKGV W DDCEW++Q +KD L S P+L+YPR+D+PFIVETDAS  GLGA+L Q+T
Sbjct:  292 AQIPFLGHLASREGLKPDPKKIEAVRKLRRPESKKQVRQLLGLASYYRQFVPNFASIAAPLYKLTKDKPKGVLWDDDCEWAFQEIKDSLTSAPVLMYPRWDKPFIVETDASKTGLGAILLQQT 414

[Close]

BLAST of mRNA_H-akashiwo_Contig1175.3.1 vs. uniprot
Match: A0A8M1HLT4_BETSP (uncharacterized mitochondrial protein AtMg00860-like n=1 Tax=Betta splendens TaxID=158456 RepID=A0A8M1HLT4_BETSP)

HSP 1 Score: 140 bits (353), Expect = 2.030e-39
Identity = 68/123 (55.28%), Postives = 91/123 (73.98%), Query Frame = 0

Query:    2 QVPWLGHIITREGIKPDPKKIEAVKGMRRPASKKQVRQFLGLASYYRQFVEGFSEIAKPLYQLTKDTPKGVEWTDDCEWSWQTLKDKLVSTPILIYPRFDRPFIVETDASGQGLGAVLSQETD 124
            +V +LGH+I+ +G+  DPKK+EAV G RRP    ++R FLG ASYYR+FVEGF+++A PL+++  +  +  +WT  CE S++ LK KLVS P+L Y  F RPFI+E DAS  GLGAVLSQETD
Sbjct:   26 EVGYLGHVISGQGVSTDPKKVEAVAGWRRPQQVSELRTFLGFASYYRRFVEGFAKLAGPLHRVVAELTES-KWTPQCEQSFEALKAKLVSAPVLAYADFGRPFILEIDASHDGLGAVLSQETD 147

[Close]

BLAST of mRNA_H-akashiwo_Contig1175.3.1 vs. uniprot
Match: A0A674PMZ3_TAKRU (Ribonuclease H n=1 Tax=Takifugu rubripes TaxID=31033 RepID=A0A674PMZ3_TAKRU)

HSP 1 Score: 146 bits (369), Expect = 2.440e-38
Identity = 75/134 (55.97%), Postives = 93/134 (69.40%), Query Frame = 0

Query:    2 QVPWLGHIITREGIKPDPKKIEAVKGMRRPASKKQVRQFLGLASYYRQFVEGFSEIAKPLYQLTKDTPK-----------GVEWTDDCEWSWQTLKDKLVSTPILIYPRFDRPFIVETDASGQGLGAVLSQETD 124
            QV +LGHII+ +G+  DPKKIEAV G +RP    ++R FLG ASYYR+FV+GF+++AKPL+QL  D              G  WT +CE S+  LK +LVSTP+L Y  F RPFI+ETDAS  GLGAVLSQETD
Sbjct:  193 QVSYLGHIISSQGVSTDPKKIEAVAGWQRPRHISELRSFLGFASYYRRFVDGFAKMAKPLHQLVADLAGTKTKRGSGRALGSAWTPECEESFNALKSRLVSTPVLAYADFSRPFILETDASHSGLGAVLSQETD 326

[Close]

BLAST of mRNA_H-akashiwo_Contig1175.3.1 vs. uniprot
Match: A0A5C6N8P1_9TELE (Ribonuclease H n=1 Tax=Takifugu flavidus TaxID=433684 RepID=A0A5C6N8P1_9TELE)

HSP 1 Score: 146 bits (369), Expect = 2.460e-38
Identity = 75/134 (55.97%), Postives = 93/134 (69.40%), Query Frame = 0

Query:    2 QVPWLGHIITREGIKPDPKKIEAVKGMRRPASKKQVRQFLGLASYYRQFVEGFSEIAKPLYQLTKDTPK-----------GVEWTDDCEWSWQTLKDKLVSTPILIYPRFDRPFIVETDASGQGLGAVLSQETD 124
            QV +LGHII+ +G+  DPKKIEAV G +RP    ++R FLG ASYYR+FV+GF+++AKPL+QL  D              G  WT +CE S+  LK +LVSTP+L Y  F RPFI+ETDAS  GLGAVLSQETD
Sbjct:  414 QVSYLGHIISSQGVSTDPKKIEAVAGWQRPRHISELRSFLGFASYYRRFVDGFAKMAKPLHQLVADLAGTKTKQGSGQALGSAWTPECEESFNALKSRLVSTPVLAYADFSRPFILETDASHSGLGAVLSQETD 547

[Close]

BLAST of mRNA_H-akashiwo_Contig1175.3.1 vs. uniprot
Match: A0A5C6N0M9_9TELE (Ribonuclease H n=1 Tax=Takifugu flavidus TaxID=433684 RepID=A0A5C6N0M9_9TELE)

HSP 1 Score: 145 bits (365), Expect = 6.990e-38
Identity = 74/134 (55.22%), Postives = 92/134 (68.66%), Query Frame = 0

Query:    2 QVPWLGHIITREGIKPDPKKIEAVKGMRRPASKKQVRQFLGLASYYRQFVEGFSEIAKPLYQLTKDTPK-----------GVEWTDDCEWSWQTLKDKLVSTPILIYPRFDRPFIVETDASGQGLGAVLSQETD 124
            QV +LGHII+ +G+  DPKKIEAV G +RP    ++R FLG ASYYR+FV+GF+++AKPL+QL  D              G  WT +CE S+  LK +LVSTP+L Y  F RPFI+ETD S  GLGAVLSQETD
Sbjct:  381 QVSYLGHIISSQGVSTDPKKIEAVAGWQRPRHISELRSFLGFASYYRRFVDGFAKMAKPLHQLVADLAGTKTKRGSGRALGSAWTPECEESFNALKSRLVSTPVLAYADFSRPFILETDTSHSGLGAVLSQETD 514

[Close]

BLAST of mRNA_H-akashiwo_Contig1175.3.1 vs. uniprot
Match: A0A5C6NI97_9TELE (Ribonuclease H n=2 Tax=Takifugu flavidus TaxID=433684 RepID=A0A5C6NI97_9TELE)

HSP 1 Score: 143 bits (361), Expect = 3.000e-37
Identity = 74/134 (55.22%), Postives = 92/134 (68.66%), Query Frame = 0

Query:    2 QVPWLGHIITREGIKPDPKKIEAVKGMRRPASKKQVRQFLGLASYYRQFVEGFSEIAKPLYQLTKDTPK-----------GVEWTDDCEWSWQTLKDKLVSTPILIYPRFDRPFIVETDASGQGLGAVLSQETD 124
            QV +LGHII+ +G+  DPKKIEAV G + P    ++R FLG ASYYR+FV+GF+++AKPL+QL  D              G  WT +CE S+  LK +LVSTP+L Y  F RPFI+ETDAS  GLGAVLSQETD
Sbjct:  941 QVSYLGHIISSQGVSTDPKKIEAVAGWQCPRHISELRSFLGFASYYRRFVDGFAKMAKPLHQLVADLAGTKTKRGSGRALGSAWTPECEESFNALKSRLVSTPVLAYADFSRPFILETDASHSGLGAVLSQETD 1074

[Close]

BLAST of mRNA_H-akashiwo_Contig1175.3.1 vs. uniprot
Match: A0A5C6NL01_9TELE (Retrovirus-related Pol polyprotein from transposon opus (Fragment) n=1 Tax=Takifugu flavidus TaxID=433684 RepID=A0A5C6NL01_9TELE)

HSP 1 Score: 141 bits (356), Expect = 1.390e-36
Identity = 73/133 (54.89%), Postives = 91/133 (68.42%), Query Frame = 0

Query:    3 VPWLGHIITREGIKPDPKKIEAVKGMRRPASKKQVRQFLGLASYYRQFVEGFSEIAKPLYQLTKDTPK-----------GVEWTDDCEWSWQTLKDKLVSTPILIYPRFDRPFIVETDASGQGLGAVLSQETD 124
            V +LGHII+ +G+  DPKKIEAV G + P    ++R FLG ASYYR+FV+GF+++AKPL+QL  D              G  WT +CE S+  LK +LVSTP+L Y  F RPFI+ETDAS  GLGAVLSQETD
Sbjct:  648 VSYLGHIISSQGVSTDPKKIEAVAGWQCPRHISELRSFLGFASYYRRFVDGFAKMAKPLHQLVADLAGTKTKRGSGRALGSAWTPECEESFNALKSRLVSTPVLAYADFSRPFILETDASHSGLGAVLSQETD 780

[Close]

BLAST of mRNA_H-akashiwo_Contig1175.3.1 vs. uniprot
Match: UPI0011C185D9 (uncharacterized protein LOC115589347 n=1 Tax=Sparus aurata TaxID=8175 RepID=UPI0011C185D9)

HSP 1 Score: 141 bits (355), Expect = 1.920e-36
Identity = 72/134 (53.73%), Postives = 90/134 (67.16%), Query Frame = 0

Query:    2 QVPWLGHIITREGIKPDPKKIEAVKGMRRPASKKQVRQFLGLASYYRQFVEGFSEIAKPLYQLTKDTPK-----------GVEWTDDCEWSWQTLKDKLVSTPILIYPRFDRPFIVETDASGQGLGAVLSQETD 124
            QV +LGH+I+ +G+  DPKK+EAV   +RP    ++R FLG ASYYR+FV+GF+++AKPL+QL  D              G  WT  CE S+  LK KLVS P+L Y  F RPFI+ETDAS  GLGAVLSQETD
Sbjct:  877 QVLYLGHVISSQGVSTDPKKVEAVANWQRPRHISELRSFLGFASYYRRFVDGFAKLAKPLHQLVADLAGTKSRKGSGQALGAAWTPLCEGSFNALKSKLVSAPVLAYADFSRPFILETDASHSGLGAVLSQETD 1010

The following BLAST results are available for this feature:

BLAST of mRNA_H-akashiwo_Contig1175.3.1 vs. uniprot

BLAST of mRNA_H-akashiwo_Contig1175.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A7S3XVA0_HETAK	4.050e-55	69.92	Hypothetical protein (Fragment) n=2 Tax=Heterosigm...	[more]
A0A7S3XU57_HETAK	5.500e-55	69.11	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A7S3XV63_HETAK	8.010e-54	69.92	Hypothetical protein (Fragment) n=3 Tax=Heterosigm...	[more]
A0A8M1HLT4_BETSP	2.030e-39	55.28	uncharacterized mitochondrial protein AtMg00860-li...	[more]
A0A674PMZ3_TAKRU	2.440e-38	55.97	Ribonuclease H n=1 Tax=Takifugu rubripes TaxID=310...	[more]
A0A5C6N8P1_9TELE	2.460e-38	55.97	Ribonuclease H n=1 Tax=Takifugu flavidus TaxID=433...	[more]
A0A5C6N0M9_9TELE	6.990e-38	55.22	Ribonuclease H n=1 Tax=Takifugu flavidus TaxID=433...	[more]
A0A5C6NI97_9TELE	3.000e-37	55.22	Ribonuclease H n=2 Tax=Takifugu flavidus TaxID=433...	[more]
A0A5C6NL01_9TELE	1.390e-36	54.89	Retrovirus-related Pol polyprotein from transposon...	[more]
UPI0011C185D9	1.920e-36	53.73	uncharacterized protein LOC115589347 n=1 Tax=Sparu...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR041577	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	PFAM	PF17919	RT_RNaseH_2	coord: 74..124 e-value: 1.6E-16 score: 60.2
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 20..109 e-value: 4.9E-28 score: 99.0
None	No IPR available	PANTHER	PTHR24559:SF324	TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEIN	coord: 1..123
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 1..123
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 2..123

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-akashiwo_Contig1175	contig	H-akashiwo_Contig1175:159697..160068 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Heterosigma akashiwo CCMP452 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-akashiwo_Contig1175.3.1	mRNA_H-akashiwo_Contig1175.3.1	Heterosigma akashiwo CCMP452	mRNA	H-akashiwo_Contig1175 159697..160068 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-akashiwo_Contig1175.3.1 ID=prot_H-akashiwo_Contig1175.3.1|Name=mRNA_H-akashiwo_Contig1175.3.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=124bp
SQVPWLGHIITREGIKPDPKKIEAVKGMRRPASKKQVRQFLGLASYYRQF
VEGFSEIAKPLYQLTKDTPKGVEWTDDCEWSWQTLKDKLVSTPILIYPRF
DRPFIVETDASGQGLGAVLSQETD

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR041577	RT_RNaseH_2
IPR043128	Rev_trsase/Diguanyl_cyclase
IPR043502	DNA/RNA_pol_sf