prot_H-akashiwo_Contig117.14.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig117.14.1
Unique Nameprot_H-akashiwo_Contig117.14.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length187
Homology
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BLAST of mRNA_H-akashiwo_Contig117.14.1 vs. uniprot
Match: A0A7S3XKZ6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XKZ6_HETAK)

HSP 1 Score: 166 bits (420), Expect = 2.630e-46
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0 
Query:  108 MDTNEWSFLVGTGDAEHYLTGGSCGPGTPQYVVATYDATSQVAQLYVNGNLTANETVPSYSATNTPLVVGGGYVGLSNYT 187
            MDTNEWSFLVGTGDAEHYLTGGSCGPGTPQYVVATYDATSQVAQLYVNGNLTANETVPSYSATNTPLVVGGGYVGLSNYT
Sbjct:    1 MDTNEWSFLVGTGDAEHYLTGGSCGPGTPQYVVATYDATSQVAQLYVNGNLTANETVPSYSATNTPLVVGGGYVGLSNYT 80
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BLAST of mRNA_H-akashiwo_Contig117.14.1 vs. uniprot
Match: UPI00030520DA (FG-GAP-like repeat-containing protein n=1 Tax=Synechococcus sp. (strain ATCC 27167 / PCC 6312) TaxID=195253 RepID=UPI00030520DA)

HSP 1 Score: 53.9 bits (128), Expect = 4.290e-5
Identity = 38/104 (36.54%), Postives = 54/104 (51.92%), Query Frame = 0 
Query:   79 SFWAKPIANQPTVAVVSASQS---TQ--GVSVLCMDTNEWSFLVGTGDAEHYLTGGSCGPGTPQYVVATYDATSQVAQLYVNGNLTANETVPSYSATNTPLVVG 177
            +F A P A     +  + ++S   TQ  G S+   + N   F  G GDA      GS  P T  YV ATY++++QVA LYVNG L A +T   ++    P+V+G
Sbjct:  587 TFVANPFAEVAHTSTTTQTESLSFTQVTGWSIRTGNNNNIVFNAGGGDA----VSGSLNPNTWYYVAATYNSSTQVASLYVNGELVAQQTGSRFAPNAVPVVLG 686
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BLAST of mRNA_H-akashiwo_Contig117.14.1 vs. uniprot
Match: A0A1J7BLB7_9ACTN (LamGL domain-containing protein n=2 Tax=Streptomyces gilvigriseus TaxID=1428644 RepID=A0A1J7BLB7_9ACTN)

HSP 1 Score: 53.1 bits (126), Expect = 7.530e-5
Identity = 48/146 (32.88%), Postives = 63/146 (43.15%), Query Frame = 0 
Query:   33 SGVTTVPSVIPAGDGVSFYFDGNSNSTVEVDPTAKFNFFEDRTFSISFWAKPIANQPTVAVVSASQSTQGVSVLCMDTN-------EWSFLVGTGDAEHY----LTGGSCGPGTPQYVVATYDATSQVAQLYVNGNL--TANETVP 165
            SG TT  S    G  ++F  DG + +     P         R+FS+S W  P A+ PT     ASQ     S   +  N       EW F +   D  +      T      GT  ++VATY+AT+Q A LYVNG L   AN+  P
Sbjct: 1383 SGTTTWTSDTTRGQTLAF--DGQTGAAESAGPVLD----TTRSFSLSAWVDP-ASLPTHNATIASQDATTNSAFDLQYNYAQNGSPEWDFALAQTDTSNAQFANATATGVTAGTWTHLVATYNATTQTAYLYVNGTLQGVANQVTP 1521
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig117.14.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A7S3XKZ6_HETAK2.630e-46100.00Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
UPI00030520DA4.290e-536.54FG-GAP-like repeat-containing protein n=1 Tax=Syne... [more]
A0A1J7BLB7_9ACTN7.530e-532.88LamGL domain-containing protein n=2 Tax=Streptomyc... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13385Laminin_G_3coord: 57..181
e-value: 6.5E-15
score: 55.5
NoneNo IPR availableGENE3D2.60.120.200coord: 8..186
e-value: 3.9E-19
score: 71.3
IPR013320Concanavalin A-like lectin/glucanase domain superfamilySUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 6..180

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig117contigH-akashiwo_Contig117:1005795..1007409 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig117.14.1mRNA_H-akashiwo_Contig117.14.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig117 1005795..1007409 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig117.14.1 ID=prot_H-akashiwo_Contig117.14.1|Name=mRNA_H-akashiwo_Contig117.14.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=187bp
DLDADLYLDFDADQLKSRICYDEAQNIEGTIGSGVTTVPSVIPAGDGVSF
YFDGNSNSTVEVDPTAKFNFFEDRTFSISFWAKPIANQPTVAVVSASQST
QGVSVLCMDTNEWSFLVGTGDAEHYLTGGSCGPGTPQYVVATYDATSQVA
QLYVNGNLTANETVPSYSATNTPLVVGGGYVGLSNYT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013320ConA-like_dom_sf