prot_H-akashiwo_Contig116.16.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-akashiwo_Contig116.16.1
Unique Name	prot_H-akashiwo_Contig116.16.1
Type	polypeptide
Organism	Heterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length	234

Homology

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BLAST of mRNA_H-akashiwo_Contig116.16.1 vs. uniprot
Match: UPI0019E90B6C (Response regulator transcription factor n=1 Tax=Synechococcales cyanobacterium M55_K2018_004 TaxID=2774347 RepID=UPI0019E90B6C)

HSP 1 Score: 196 bits (498), Expect = 1.740e-59
Identity = 109/230 (47.39%), Postives = 157/230 (68.26%), Query Frame = 0

Query:    7 EVLLVDDDESILKSVSRYLAGRGVVVTTAASAKEAWVHLQTAPRLPDVLITDINMPGVDGYQLVQKLRSRIEYAALPIVFLSARGMTPDRIQGFRSGGQAYITKPFDPEELISLIDSL----AATKRRMEDPK--GIVSMRDELAKVRQALVESTSLRSAPKNDGIPPPSLTKREQSVLDRLAEGMTNKEIAQDLDLSLRYVEKVVERMFEKTQTSNRTKLVRYAVENGM 230
            ++LLVDD+  + ++V  YL   G  V TA++A++ W  LQ +  LPD++ITDI MP VDGYQ ++++R    +  LP++FL+ARGMT DRIQG+ +G  AY+ KPFDPEEL+++++SL    AA  R   D +   I  M  ++A++R  L +  S+   P    I    LT REQSVL+R+AEG+ NKEIA+ LD S+R VEK V R+F KT T++RT+LVRYA+E+G+
Sbjct:    4 QILLVDDEPGLRQAVQAYLEDSGFTVQTASNARDGWDLLQQS--LPDLVITDIMMPQVDGYQFLKQMRDDPRFETLPVIFLTARGMTSDRIQGYTAGCDAYLPKPFDPEELVAIVNSLLERRAALNRAASDSETPDIAEMARQIAEIRAMLNQRGSIAQTPAPIKI---DLTPREQSVLERVAEGLMNKEIARQLDTSVRNVEKYVSRLFSKTGTNSRTELVRYALEHGL 228

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BLAST of mRNA_H-akashiwo_Contig116.16.1 vs. uniprot
Match: UPI0008F98EE2 (response regulator transcription factor n=1 Tax=Geitlerinema sp. PCC 9228 TaxID=111611 RepID=UPI0008F98EE2)

HSP 1 Score: 196 bits (498), Expect = 1.800e-59
Identity = 105/234 (44.87%), Postives = 159/234 (67.95%), Query Frame = 0

Query:    6 TEVLLVDDDESILKSVSRYLAGRGVVVTTAASAKEAWVHLQTAPRLPDVLITDINMPGVDGYQLVQKLRSRIEYAALPIVFLSARGMTPDRIQGFRSGGQAYITKPFDPEELISLIDSLAATKRRMEDPKG-------IVSMRDELAKVRQALVESTSLRSAPKNDGIPPPSLTKREQSVLDRLAEGMTNKEIAQDLDLSLRYVEKVVERMFEKTQTSNRTKLVRYAVENGMVS 232
            ++VLLVDD+  +L++V  YL   G+ V  A++A E W  LQ +P  PD++I+DI MP VDGYQ +Q++R    Y  LP+VFL+ARGMT DRI G+++G  AYI+KPFDPEEL++++++L + ++ +E+ K        I  +  ++A+++  L +   +        +    LT REQS+LD +A+GM NKEIA+ LD S+R VEK V R+F KT T++RT+LVRYA+E+G+ S
Sbjct:    3 SKVLLVDDEPGLLEAVQAYLEDSGLEVEVASNANEGWEKLQQSP--PDLVISDIMMPQVDGYQFLQQIREDPRYKTLPVVFLTARGMTGDRIAGYQAGIDAYISKPFDPEELVAMVNNLLSRRQVLEEEKAESGENLNITELASQIAEIKSLLTQRHEISQTAAPIQV---ELTPREQSILDLVAKGMMNKEIAKHLDTSVRNVEKYVSRLFTKTGTTSRTELVRYALEHGLTS 231

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BLAST of mRNA_H-akashiwo_Contig116.16.1 vs. uniprot
Match: A0A1Z3HQF6_9CYAN (DNA-binding response regulator n=1 Tax=Halomicronema hongdechloris C2206 TaxID=1641165 RepID=A0A1Z3HQF6_9CYAN)

HSP 1 Score: 194 bits (493), Expect = 1.060e-58
Identity = 108/230 (46.96%), Postives = 153/230 (66.52%), Query Frame = 0

Query:    8 VLLVDDDESILKSVSRYLAGRGVVVTTAASAKEAWVHLQTAPRLPDVLITDINMPGVDGYQLVQKLRSRIEYAALPIVFLSARGMTPDRIQGFRSGGQAYITKPFDPEELISLIDSL----AATKRRMEDPKGIVSMRDELAKVRQALVESTSLRSAPKNDGIPPPSLTKREQSVLDRLAEGMTNKEIAQDLDLSLRYVEKVVERMFEKTQTSNRTKLVRYAVENGMVSS 233
            VLLVDD+  + ++V  YL   G  V  A++A+E W  LQ   R+PDVLI+DI MP VDGYQ + ++R    +  LP+VFL+ARGMT DRIQG+ +G  AY+ KPFDPEEL++++ +L     A       P  + +M  ++ ++R  L +  S+  +P    I    LT REQSVLD +AEG+ NKEIA+ LD S+R VEK V R+F KT T++RT+LVRYA+E+G++S+
Sbjct:    8 VLLVDDEPGLREAVQAYLEDSGFSVEVASNAQEGWQRLQE--RMPDVLISDIMMPQVDGYQFLAQVREDPRFKGLPVVFLTARGMTSDRIQGYNAGCDAYLPKPFDPEELVAIVGNLMQRRVAQSPEAGTPPDMATMARQIEEIRALLSQKGSVSQSPTPIRI---DLTPREQSVLDLVAEGLMNKEIARRLDTSVRNVEKYVSRLFSKTGTNSRTELVRYALEHGLIST 232

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BLAST of mRNA_H-akashiwo_Contig116.16.1 vs. uniprot
Match: A0A6L9ZXF7_9CYAN (Response regulator transcription factor n=18 Tax=Oscillatoriales TaxID=1150 RepID=A0A6L9ZXF7_9CYAN)

HSP 1 Score: 193 bits (491), Expect = 3.350e-58
Identity = 108/234 (46.15%), Postives = 158/234 (67.52%), Query Frame = 0

Query:    3 SGKTEVLLVDDDESILKSVSRYLAGRGVVVTTAASAKEAWVHLQTAPRLPDVLITDINMPGVDGYQLVQKLRSRIEYAALPIVFLSARGMTPDRIQGFRSGGQAYITKPFDPEELISLIDSL------AATKRRMEDPKGIVSMRDELAKVRQALVESTSLRSAPKNDGIPPPSLTKREQSVLDRLAEGMTNKEIAQDLDLSLRYVEKVVERMFEKTQTSNRTKLVRYAVENGM 230
            SGK  +LLVDD+  + ++V  YL   G  V  A++A + W  LQ+   LPD++ITDI MP +DGYQ +QKLR    + ALP+VFL+A+GMT DRIQG+++G  AY++KPFDPEEL++++++L      A T    E+   I  +  ++A+++  L+   ++   P    I    LT REQSVLD +A G+ NKEIA+DL+ S+R VEK V R+F KT T++RT+LVRYA+E+G+
Sbjct:   19 SGK--ILLVDDEPGLREAVQVYLEDSGFNVNVASNANDGWDILQS--YLPDLVITDIMMPQIDGYQFLQKLREDPRFKALPVVFLTAKGMTTDRIQGYQAGCDAYLSKPFDPEELVAIVENLLERRMVAKTTNEGENTSDIAVLASQIAEIKAMLMGKNTIAQTPSPIKI---DLTPREQSVLDLVARGLMNKEIARDLNTSVRNVEKYVSRLFTKTGTNSRTELVRYALEHGL 245

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BLAST of mRNA_H-akashiwo_Contig116.16.1 vs. uniprot
Match: UPI0019F240D4 (Response regulator transcription factor n=1 Tax=Leptolyngbyaceae cyanobacterium T60_A2020_046 TaxID=2747813 RepID=UPI0019F240D4)

HSP 1 Score: 191 bits (484), Expect = 2.570e-57
Identity = 107/236 (45.34%), Postives = 155/236 (65.68%), Query Frame = 0

Query:    1 MSSGKTEVLLVDDDESILKSVSRYLAGRGVVVTTAASAKEAWVHLQTAPRLPDVLITDINMPGVDGYQLVQKLRSRIEYAALPIVFLSARGMTPDRIQGFRSGGQAYITKPFDPEELISLIDSLAA--TKRRME--DPKGIVSMRDELAKVRQALVESTSLRSAPKNDGIPPPSLTKREQSVLDRLAEGMTNKEIAQDLDLSLRYVEKVVERMFEKTQTSNRTKLVRYAVENGMVS 232
            MS     +LLVDD+  + ++V  YL   G  V TA++A E W  LQ +  +PDVLI+D+ MP VDGYQ ++++R    Y ALP+VFL+ARGMT DRIQG+ +G  AY+ KPFDPEEL++++ +L    T R  E  D   I +M  ++ +++  L +  S+   P    I     T REQ VL+++AEG+ NKEIA  L+ S+R VEK V R+F KT T++RT+LVRYA+E+G+++
Sbjct:    1 MSETTGRILLVDDEPGLREAVQAYLEDSGFEVETASNATEGWGKLQVS--MPDVLISDVMMPQVDGYQFLKQVREDARYQALPVVFLTARGMTSDRIQGYNAGVDAYLPKPFDPEELVAIVTNLIERKTSRVAEGGDVPDIAAMARQIEEIKALLTQRGSIAKTPAPIRI---DFTPREQDVLNKVAEGLMNKEIASRLETSVRNVEKYVSRLFSKTGTNSRTELVRYALEHGLIT 231

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BLAST of mRNA_H-akashiwo_Contig116.16.1 vs. uniprot
Match: A0A2T2RFG1_9CYAN (DNA-binding response regulator n=1 Tax=Cyanobacteria bacterium SW_9_44_58 TaxID=1919144 RepID=A0A2T2RFG1_9CYAN)

HSP 1 Score: 190 bits (482), Expect = 5.150e-57
Identity = 100/232 (43.10%), Postives = 158/232 (68.10%), Query Frame = 0

Query:    6 TEVLLVDDDESILKSVSRYLAGRGVVVTTAASAKEAWVHLQTAPRLPDVLITDINMPGVDGYQLVQKLRSRIEYAALPIVFLSARGMTPDRIQGFRSGGQAYITKPFDPEELISLIDSLAATKRRM----EDPKGIVSMRDELAKVRQALVESTSLRSAPKNDGIPPPSLTKREQSVLDRLAEGMTNKEIAQDLDLSLRYVEKVVERMFEKTQTSNRTKLVRYAVENGMVSS 233
            T++LLVDD   + ++V  YL   G ++  A++A E W  +Q  P  PD++ITDI MP VDGYQ ++KLR+   Y  LP+VFL+A+GMT DRI+G+ SG  AY++KPFDPEEL++++ +L + +  +    E    + ++  ++A+++  L E  ++++ P    I    LT REQS+L+ +AEG+ NKEIA+ L+ S+R VEK V R+F KT T++RT+LVR+A+++G+  S
Sbjct:    7 TKLLLVDDKPGLREAVEAYLEDEGFIIQVASNANEGWELIQQQP--PDLVITDIMMPQVDGYQFLEKLRNDPRYKGLPVVFLTAKGMTADRIKGYESGCDAYLSKPFDPEELVAIVKNLLSRRETVSQSGEQNANLDAISQQIAEIKTLLGEQGNVKTTPSPIKI---DLTPREQSILNLVAEGLMNKEIARRLETSVRNVEKYVSRLFSKTGTNSRTELVRFALQHGLTES 233

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BLAST of mRNA_H-akashiwo_Contig116.16.1 vs. uniprot
Match: A0A8J6UT91_9CYAN (Response regulator transcription factor n=3 Tax=unclassified Trichocoleus TaxID=2628910 RepID=A0A8J6UT91_9CYAN)

HSP 1 Score: 189 bits (481), Expect = 6.250e-57
Identity = 103/229 (44.98%), Postives = 155/229 (67.69%), Query Frame = 0

Query:    7 EVLLVDDDESILKSVSRYLAGRGVVVTTAASAKEAWVHLQTAPRLPDVLITDINMPGVDGYQLVQKLRSRIEYAALPIVFLSARGMTPDRIQGFRSGGQAYITKPFDPEELISLIDSLAATKRRM---EDPK--GIVSMRDELAKVRQALVESTSLRSAPKNDGIPPPSLTKREQSVLDRLAEGMTNKEIAQDLDLSLRYVEKVVERMFEKTQTSNRTKLVRYAVENGM 230
            +VLLVDD+  + ++V  YL   G  V  A +A+E W  LQ   +LPD++I+D+ MP VDGYQ ++++R    + ALP+VFL+ARGMT DRIQG+++G  AY+ KPFDP+EL++++++L   +      ED +   I  M  ++A+++  L +  ++ + P      P   T REQSVLD +AEG+ NKEIA+ LD S+R VEK V R+F KT T++RT+LVRYA+E+G+
Sbjct:    4 QVLLVDDEPGLREAVQAYLEDSGFAVDVAGNAQEGWQLLQQ--KLPDLVISDVMMPQVDGYQFLKQMREDARFKALPVVFLTARGMTSDRIQGYQAGCDAYLPKPFDPDELVAIVENLLGRRTARAGTEDGETPDIADMARQIAEIKALLTQRNAISATPAPI---PVDFTPREQSVLDLVAEGLMNKEIARRLDTSVRNVEKYVSRLFSKTGTNSRTELVRYALEHGL 227

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BLAST of mRNA_H-akashiwo_Contig116.16.1 vs. uniprot
Match: A0A2P8WFP9_9CYAN (DNA-binding response regulator n=1 Tax=filamentous cyanobacterium CCP5 TaxID=2107701 RepID=A0A2P8WFP9_9CYAN)

HSP 1 Score: 189 bits (481), Expect = 6.850e-57
Identity = 109/239 (45.61%), Postives = 154/239 (64.44%), Query Frame = 0

Query:    1 MSSGKTEVLLVDDDESILKSVSRYLAGRGVVVTTAASAKEAWVHLQTAPRLPDVLITDINMPGVDGYQLVQKLRSRIEYAALPIVFLSARGMTPDRIQGFRSGGQAYITKPFDPEELISLIDSLAATKRRMEDPKG------IVSMRDELAKVRQALVESTSLRSAPKNDGIPPPSLTKREQSVLDRLAEGMTNKEIAQDLDLSLRYVEKVVERMFEKTQTSNRTKLVRYAVENGMVSS 233
            MS     +LLVDD+  + ++V  YL   G  V  A++A+E W  LQ   + PDVLI+DI MP VDGYQ +Q++R    +  LP+VFL+ARGMT DRIQG+ +G  AY+ KPFDPEEL++++ +L   +RR     G      I  M  ++ +++  L +  S+   P    I    LT REQSVLD +AEG+ NKEIA  LD S+R VEK V R+F KT T++RT+LVR+A+E+G+V++
Sbjct:    1 MSEQTGHILLVDDEPGLREAVQAYLEDSGFTVEAASNAQEGWDLLQQ--KTPDVLISDIMMPQVDGYQFLQQVRDDARFKGLPVVFLTARGMTSDRIQGYTAGCDAYLPKPFDPEELVAIVTNLI--ERRNAQAPGTSGTPDIAMMARQIEEIKAMLTQRGSVNKTPSPIRI---DLTPREQSVLDLVAEGLMNKEIASRLDTSVRNVEKYVSRLFSKTGTNSRTELVRFALEHGLVTT 232

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BLAST of mRNA_H-akashiwo_Contig116.16.1 vs. uniprot
Match: UPI001684D225 (response regulator transcription factor n=1 Tax=Pseudanabaena sp. FACHB-2040 TaxID=2692859 RepID=UPI001684D225)

HSP 1 Score: 189 bits (481), Expect = 6.850e-57
Identity = 105/237 (44.30%), Postives = 156/237 (65.82%), Query Frame = 0

Query:    1 MSSGKTEVLLVDDDESILKSVSRYLAGRGVVVTTAASAKEAWVHLQTAPRLPDVLITDINMPGVDGYQLVQKLRSRIEYAALPIVFLSARGMTPDRIQGFRSGGQAYITKPFDPEELISLIDSL----AATKRRMEDPKGIVSMRDELAKVRQALVESTSLRSAPKNDGIPPPSLTKREQSVLDRLAEGMTNKEIAQDLDLSLRYVEKVVERMFEKTQTSNRTKLVRYAVENGMVSS 233
            M+     +LLVDD+  + ++V  YL   G VV  A++A+E W  LQ   + PDV+I+DI MP VDGYQ ++++R    +  LP+VFL+ARGMT DRIQG+ +G  AY+ KPFDPEEL++++ +L    AA    + D   I +M  ++ +++  L    ++   P    I    LT REQSVLD +AEG+ NKEIA+ L+ S+R VEK V R+F KT T++RT+LVR+A+E+G+V++
Sbjct:    1 MAETSGNILLVDDEPGLREAVQAYLEDSGFVVQAASNAQEGWDLLQV--QTPDVVISDIMMPQVDGYQFLKQVREDPRFKGLPVVFLTARGMTSDRIQGYNAGADAYLPKPFDPEELVAIVGNLIGRRAAQSPDLSDTPDIATMARQIEEIKAMLSHRGNVAKTPSPIRI---DLTPREQSVLDLVAEGLMNKEIARRLETSVRNVEKYVSRLFSKTGTNSRTELVRFALEHGLVTT 232

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BLAST of mRNA_H-akashiwo_Contig116.16.1 vs. uniprot
Match: K9SBT8_9CYAN (Two component transcriptional regulator, LuxR family n=1 Tax=Geitlerinema sp. PCC 7407 TaxID=1173025 RepID=K9SBT8_9CYAN)

HSP 1 Score: 189 bits (479), Expect = 1.290e-56
Identity = 104/232 (44.83%), Postives = 157/232 (67.67%), Query Frame = 0

Query:    7 EVLLVDDDESILKSVSRYLAGRGVVVTTAASAKEAWVHLQTAPRLPDVLITDINMPGVDGYQLVQKLRSRIEYAALPIVFLSARGMTPDRIQGFRSGGQAYITKPFDPEELISLIDSLA---ATKRRMEDP---KGIVSMRDELAKVRQALVESTSLRSAPKNDGIPPPSLTKREQSVLDRLAEGMTNKEIAQDLDLSLRYVEKVVERMFEKTQTSNRTKLVRYAVENGMVS 232
            ++LLVDD+  + ++V  YL   G  V TA++AK+ W  LQ +   PD++ITDI MP VDGY+ ++++R  + + ALP+VFL+ARGMT DRIQG+++G  AY++KPFDP+EL++++++L    AT     D      I  M  ++A+++  L +   +   P    I    LT REQSVLD +AEG+ NKEIA+ L+ S+R VEK V R+F KT T++RT+LVRYA+E+G+ +
Sbjct:    4 QLLLVDDEPGLREAVQAYLEDSGFQVQTASNAKDGWDMLQRSQ--PDLVITDIMMPQVDGYEFLKQMREDVRFKALPVVFLTARGMTGDRIQGYQAGCDAYLSKPFDPDELVAIVENLLERRATATAASDSGETPDIADMARQIAEIKALLTQRGGISQTPAPIQI---DLTPREQSVLDLVAEGLMNKEIARRLETSVRNVEKYVSRLFSKTGTNSRTELVRYALEHGLTN 230

The following BLAST results are available for this feature:

BLAST of mRNA_H-akashiwo_Contig116.16.1 vs. uniprot

BLAST of mRNA_H-akashiwo_Contig116.16.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
UPI0019E90B6C	1.740e-59	47.39	Response regulator transcription factor n=1 Tax=Sy...	[more]
UPI0008F98EE2	1.800e-59	44.87	response regulator transcription factor n=1 Tax=Ge...	[more]
A0A1Z3HQF6_9CYAN	1.060e-58	46.96	DNA-binding response regulator n=1 Tax=Halomicrone...	[more]
A0A6L9ZXF7_9CYAN	3.350e-58	46.15	Response regulator transcription factor n=18 Tax=O...	[more]
UPI0019F240D4	2.570e-57	45.34	Response regulator transcription factor n=1 Tax=Le...	[more]
A0A2T2RFG1_9CYAN	5.150e-57	43.10	DNA-binding response regulator n=1 Tax=Cyanobacter...	[more]
A0A8J6UT91_9CYAN	6.250e-57	44.98	Response regulator transcription factor n=3 Tax=un...	[more]
A0A2P8WFP9_9CYAN	6.850e-57	45.61	DNA-binding response regulator n=1 Tax=filamentous...	[more]
UPI001684D225	6.850e-57	44.30	response regulator transcription factor n=1 Tax=Ps...	[more]
K9SBT8_9CYAN	1.290e-56	44.83	Two component transcriptional regulator, LuxR fami...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000792	Transcription regulator LuxR, C-terminal	PRINTS	PR00038	HTHLUXR	coord: 185..201 score: 37.41 coord: 171..185 score: 43.33
IPR000792	Transcription regulator LuxR, C-terminal	SMART	SM00421	luxrmega5	coord: 168..225 e-value: 4.1E-17 score: 72.8
IPR000792	Transcription regulator LuxR, C-terminal	PFAM	PF00196	GerE	coord: 170..225 e-value: 1.7E-14 score: 53.1
IPR000792	Transcription regulator LuxR, C-terminal	PROSITE	PS50043	HTH_LUXR_2	coord: 164..229 score: 22.733644
IPR000792	Transcription regulator LuxR, C-terminal	CDD	cd06170	LuxR_C_like	coord: 171..227 e-value: 3.95657E-13 score: 60.2408
IPR001789	Signal transduction response regulator, receiver domain	SMART	SM00448	REC_2	coord: 6..121 e-value: 1.7E-37 score: 140.5
IPR001789	Signal transduction response regulator, receiver domain	PFAM	PF00072	Response_reg	coord: 8..121 e-value: 9.7E-26 score: 90.1
IPR001789	Signal transduction response regulator, receiver domain	PROSITE	PS50110	RESPONSE_REGULATORY	coord: 7..125 score: 40.696922
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 167..232 e-value: 4.5E-19 score: 69.8
None	No IPR available	GENE3D	3.40.50.2300		coord: 6..155 e-value: 1.3E-34 score: 120.9
None	No IPR available	PIRSR	PIRSR026389-4	PIRSR026389-4	coord: 7..111 e-value: 7.7E-6 score: 22.2
None	No IPR available	PIRSR	PIRSR002937-1	PIRSR002937-1	coord: 5..138 e-value: 2.9E-13 score: 47.4
None	No IPR available	PANTHER	PTHR48111:SF40	PHOSPHATE REGULON TRANSCRIPTIONAL REGULATORY PROTEIN PHOB	coord: 7..224
IPR039420	Transcriptional regulatory protein WalR-like	PANTHER	PTHR48111	REGULATOR OF RPOS	coord: 7..224
IPR011006	CheY-like superfamily	SUPERFAMILY	52172	CheY-like	coord: 6..137
IPR016032	Signal transduction response regulator, C-terminal effector	SUPERFAMILY	46894	C-terminal effector domain of the bipartite response regulators	coord: 167..231

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-akashiwo_Contig116	contig	H-akashiwo_Contig116:646124..646825 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Heterosigma akashiwo CCMP452 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-akashiwo_Contig116.16.1	mRNA_H-akashiwo_Contig116.16.1	Heterosigma akashiwo CCMP452	mRNA	H-akashiwo_Contig116 646124..646831 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-akashiwo_Contig116.16.1 ID=prot_H-akashiwo_Contig116.16.1|Name=mRNA_H-akashiwo_Contig116.16.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=234bp
MSSGKTEVLLVDDDESILKSVSRYLAGRGVVVTTAASAKEAWVHLQTAPR
LPDVLITDINMPGVDGYQLVQKLRSRIEYAALPIVFLSARGMTPDRIQGF
RSGGQAYITKPFDPEELISLIDSLAATKRRMEDPKGIVSMRDELAKVRQA
LVESTSLRSAPKNDGIPPPSLTKREQSVLDRLAEGMTNKEIAQDLDLSLR
YVEKVVERMFEKTQTSNRTKLVRYAVENGMVSS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000792	Tscrpt_reg_LuxR_C
IPR001789	Sig_transdc_resp-reg_receiver
IPR036388	WH-like_DNA-bd_sf
IPR039420	WalR-like
IPR011006	CheY-like_superfamily
IPR016032	Sig_transdc_resp-reg_C-effctor