prot_H-akashiwo_Contig1158.1.2 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig1158.1.2
Unique Nameprot_H-akashiwo_Contig1158.1.2
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length93
Homology
BLAST of mRNA_H-akashiwo_Contig1158.1.2 vs. uniprot
Match: A0A067BWG4_SAPPC (40S ribosomal protein S27 n=6 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BWG4_SAPPC)

HSP 1 Score: 154 bits (390), Expect = 2.070e-47
Identity = 73/81 (90.12%), Postives = 77/81 (95.06%), Query Frame = 0
Query:   13 MPRDLLNPSASEEARKHKLKRLVQSPNSFFMDVKCPGCFNITTVFSHAQTVVLCGSCSMMLCQPTGGRARLTEGCSFRRKV 93
            M RDLL+PSASEE  KHKLKRLVQSPNSFFMDVKCPGCFNITTVFSHAQTVVLCGSCS+MLCQPTGG+ARLTEGCSFR+K 
Sbjct:    1 MARDLLHPSASEERSKHKLKRLVQSPNSFFMDVKCPGCFNITTVFSHAQTVVLCGSCSVMLCQPTGGKARLTEGCSFRKKT 81          
BLAST of mRNA_H-akashiwo_Contig1158.1.2 vs. uniprot
Match: F0YBZ0_AURAN (40S ribosomal protein S27 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YBZ0_AURAN)

HSP 1 Score: 152 bits (384), Expect = 1.700e-46
Identity = 71/81 (87.65%), Postives = 77/81 (95.06%), Query Frame = 0
Query:   13 MPRDLLNPSASEEARKHKLKRLVQSPNSFFMDVKCPGCFNITTVFSHAQTVVLCGSCSMMLCQPTGGRARLTEGCSFRRKV 93
            M +DLL+PS+ EE RKHKLKRLVQSPNSFFMDVKCPGCFNITTVFSHAQT VLCGSCSMMLCQPTGG+ARLTEGCSFR+K+
Sbjct:    1 MVKDLLHPSSVEEKRKHKLKRLVQSPNSFFMDVKCPGCFNITTVFSHAQTTVLCGSCSMMLCQPTGGKARLTEGCSFRKKL 81          
BLAST of mRNA_H-akashiwo_Contig1158.1.2 vs. uniprot
Match: A0A835Z0C8_9STRA (40S ribosomal protein S27 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0C8_9STRA)

HSP 1 Score: 152 bits (383), Expect = 2.420e-46
Identity = 70/81 (86.42%), Postives = 76/81 (93.83%), Query Frame = 0
Query:   13 MPRDLLNPSASEEARKHKLKRLVQSPNSFFMDVKCPGCFNITTVFSHAQTVVLCGSCSMMLCQPTGGRARLTEGCSFRRKV 93
            MP D+L+PSA EE RKHKLKRLVQSPNSFFMDVKCPGCFNITTVFSHAQTVV+CG+CS +LC PTGG+ARLTEGCSFRRKV
Sbjct:    1 MPHDILHPSAEEEKRKHKLKRLVQSPNSFFMDVKCPGCFNITTVFSHAQTVVVCGACSTILCHPTGGKARLTEGCSFRRKV 81          
BLAST of mRNA_H-akashiwo_Contig1158.1.2 vs. uniprot
Match: M4BSI3_HYAAE (40S ribosomal protein S27 n=20 Tax=Oomycota TaxID=4762 RepID=M4BSI3_HYAAE)

HSP 1 Score: 151 bits (381), Expect = 5.490e-46
Identity = 68/81 (83.95%), Postives = 78/81 (96.30%), Query Frame = 0
Query:   13 MPRDLLNPSASEEARKHKLKRLVQSPNSFFMDVKCPGCFNITTVFSHAQTVVLCGSCSMMLCQPTGGRARLTEGCSFRRKV 93
            +PRDLL+PSA+EEA KHKL+RLVQSPNS+FMDVKCPGCFNITTVFSHAQTVVLCGSCS+MLCQPTGG+ARLT+GC +R+K 
Sbjct:    5 LPRDLLHPSAAEEASKHKLRRLVQSPNSYFMDVKCPGCFNITTVFSHAQTVVLCGSCSVMLCQPTGGKARLTDGCQYRKKT 85          
BLAST of mRNA_H-akashiwo_Contig1158.1.2 vs. uniprot
Match: F4RQL1_MELLP (40S ribosomal protein S27 n=3 Tax=Pucciniales TaxID=5258 RepID=F4RQL1_MELLP)

HSP 1 Score: 150 bits (378), Expect = 1.440e-45
Identity = 70/81 (86.42%), Postives = 76/81 (93.83%), Query Frame = 0
Query:   12 TMPRDLLNPSASEEARKHKLKRLVQSPNSFFMDVKCPGCFNITTVFSHAQTVVLCGSCSMMLCQPTGGRARLTEGCSFRRK 92
            T+  DLLNPSA +E RKHKLKRLVQSPNS+FMDVKCPGCFNITTVFSHAQTVVLCGSC+ +LCQPTGG+ARLTEGCSFRRK
Sbjct:    2 TLAIDLLNPSAEQERRKHKLKRLVQSPNSYFMDVKCPGCFNITTVFSHAQTVVLCGSCATVLCQPTGGKARLTEGCSFRRK 82          
BLAST of mRNA_H-akashiwo_Contig1158.1.2 vs. uniprot
Match: E3KW44_PUCGT (40S ribosomal protein S27 n=4 Tax=Puccinia TaxID=5296 RepID=E3KW44_PUCGT)

HSP 1 Score: 150 bits (378), Expect = 3.480e-45
Identity = 70/81 (86.42%), Postives = 76/81 (93.83%), Query Frame = 0
Query:   12 TMPRDLLNPSASEEARKHKLKRLVQSPNSFFMDVKCPGCFNITTVFSHAQTVVLCGSCSMMLCQPTGGRARLTEGCSFRRK 92
            T+  DLLNPSA +E RKHKLKRLVQSPNS+FMDVKCPGCFNITTVFSHAQTVVLCGSC+ +LCQPTGG+ARLTEGCSFRRK
Sbjct:   31 TLAVDLLNPSAEQERRKHKLKRLVQSPNSYFMDVKCPGCFNITTVFSHAQTVVLCGSCATVLCQPTGGKARLTEGCSFRRK 111          
BLAST of mRNA_H-akashiwo_Contig1158.1.2 vs. uniprot
Match: W2JF57_PHYPR (40S ribosomal protein S27 n=10 Tax=Oomycota TaxID=4762 RepID=W2JF57_PHYPR)

HSP 1 Score: 151 bits (381), Expect = 3.580e-45
Identity = 68/81 (83.95%), Postives = 78/81 (96.30%), Query Frame = 0
Query:   13 MPRDLLNPSASEEARKHKLKRLVQSPNSFFMDVKCPGCFNITTVFSHAQTVVLCGSCSMMLCQPTGGRARLTEGCSFRRKV 93
            MPRDLL+PSA+EEA KHKL+RLVQ+PNS+FMDVKCPGCFNITTVFSHAQTVVLCGSCS+MLCQPTGG+ARLT+GC +R+K 
Sbjct:    1 MPRDLLHPSAAEEASKHKLRRLVQAPNSYFMDVKCPGCFNITTVFSHAQTVVLCGSCSVMLCQPTGGKARLTDGCQYRKKT 81          
BLAST of mRNA_H-akashiwo_Contig1158.1.2 vs. uniprot
Match: D7FUE0_ECTSI (40S ribosomal protein S27 n=3 Tax=PX clade TaxID=569578 RepID=D7FUE0_ECTSI)

HSP 1 Score: 149 bits (375), Expect = 4.010e-45
Identity = 69/81 (85.19%), Postives = 76/81 (93.83%), Query Frame = 0
Query:   13 MPRDLLNPSASEEARKHKLKRLVQSPNSFFMDVKCPGCFNITTVFSHAQTVVLCGSCSMMLCQPTGGRARLTEGCSFRRKV 93
            MP DLL+P++S E R HKLKRLVQSPNSFFMDVKCPGCFNITTVFSHAQTVV+CGSCS +LCQPTGG+ARLTEGCSFR+KV
Sbjct:    1 MPADLLHPTSSHEKRVHKLKRLVQSPNSFFMDVKCPGCFNITTVFSHAQTVVVCGSCSTILCQPTGGKARLTEGCSFRKKV 81          
BLAST of mRNA_H-akashiwo_Contig1158.1.2 vs. uniprot
Match: B8CCJ1_THAPS (RS27, ribosomal protein 27 40S small ribosomal subunit n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CCJ1_THAPS)

HSP 1 Score: 148 bits (373), Expect = 8.100e-45
Identity = 68/81 (83.95%), Postives = 76/81 (93.83%), Query Frame = 0
Query:   13 MPRDLLNPSASEEARKHKLKRLVQSPNSFFMDVKCPGCFNITTVFSHAQTVVLCGSCSMMLCQPTGGRARLTEGCSFRRKV 93
            MP DLL+P+A +EAR HKLKRLV SPNSFFMD+KCPGCF ITTVFSHAQTVVLCGSC++MLCQPTGGRARLTEGCS+R+KV
Sbjct:    1 MPVDLLHPTAEQEARTHKLKRLVASPNSFFMDIKCPGCFQITTVFSHAQTVVLCGSCNVMLCQPTGGRARLTEGCSYRKKV 81          
BLAST of mRNA_H-akashiwo_Contig1158.1.2 vs. uniprot
Match: A0A3M6VGE9_9STRA (40S ribosomal protein S27 n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VGE9_9STRA)

HSP 1 Score: 147 bits (370), Expect = 2.700e-44
Identity = 65/80 (81.25%), Postives = 77/80 (96.25%), Query Frame = 0
Query:   14 PRDLLNPSASEEARKHKLKRLVQSPNSFFMDVKCPGCFNITTVFSHAQTVVLCGSCSMMLCQPTGGRARLTEGCSFRRKV 93
            PRDLL+P+A++EA KHKL+RLVQ+PNS+FMDVKCPGCFNITTVFSHAQTVVLCGSCS+MLCQPTGG+ARLT+GC +R+K 
Sbjct:    7 PRDLLHPTAADEASKHKLRRLVQTPNSYFMDVKCPGCFNITTVFSHAQTVVLCGSCSVMLCQPTGGKARLTDGCQYRKKT 86          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1158.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A067BWG4_SAPPC2.070e-4790.1240S ribosomal protein S27 n=6 Tax=Saprolegniaceae ... [more]
F0YBZ0_AURAN1.700e-4687.6540S ribosomal protein S27 n=1 Tax=Aureococcus anop... [more]
A0A835Z0C8_9STRA2.420e-4686.4240S ribosomal protein S27 n=1 Tax=Tribonema minus ... [more]
M4BSI3_HYAAE5.490e-4683.9540S ribosomal protein S27 n=20 Tax=Oomycota TaxID=... [more]
F4RQL1_MELLP1.440e-4586.4240S ribosomal protein S27 n=3 Tax=Pucciniales TaxI... [more]
E3KW44_PUCGT3.480e-4586.4240S ribosomal protein S27 n=4 Tax=Puccinia TaxID=5... [more]
W2JF57_PHYPR3.580e-4583.9540S ribosomal protein S27 n=10 Tax=Oomycota TaxID=... [more]
D7FUE0_ECTSI4.010e-4585.1940S ribosomal protein S27 n=3 Tax=PX clade TaxID=5... [more]
B8CCJ1_THAPS8.100e-4583.95RS27, ribosomal protein 27 40S small ribosomal sub... [more]
A0A3M6VGE9_9STRA2.700e-4481.2540S ribosomal protein S27 n=1 Tax=Peronospora effu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000592Ribosomal protein S27PFAMPF01667Ribosomal_S27ecoord: 38..92
e-value: 3.0E-29
score: 100.5
IPR000592Ribosomal protein S27PANTHERPTHR1159440S RIBOSOMAL PROTEIN S27coord: 16..93
IPR000592Ribosomal protein S27PROSITEPS01168RIBOSOMAL_S27Ecoord: 46..78
IPR000592Ribosomal protein S27HAMAPMF_00371Ribosomal_S27ecoord: 32..92
score: 17.38002
IPR023407Ribosomal protein S27, zinc-binding domain superfamilyGENE3D2.20.25.100coord: 13..93
e-value: 1.3E-48
score: 164.8
NoneNo IPR availablePANTHERPTHR11594:SF740S RIBOSOMAL PROTEIN S27-RELATEDcoord: 16..93
IPR011332Zinc-binding ribosomal proteinSUPERFAMILY57829Zn-binding ribosomal proteinscoord: 38..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1158contigH-akashiwo_Contig1158:32016..32497 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1158.1.2mRNA_H-akashiwo_Contig1158.1.2Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig1158 32016..32497 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig1158.1.2 ID=prot_H-akashiwo_Contig1158.1.2|Name=mRNA_H-akashiwo_Contig1158.1.2|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=93bp
RETLIERTPRRTMPRDLLNPSASEEARKHKLKRLVQSPNSFFMDVKCPGC
FNITTVFSHAQTVVLCGSCSMMLCQPTGGRARLTEGCSFRRKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000592Ribosomal_S27
IPR023407Ribosomal_S27_Zn-bd_dom_sf
IPR011332Ribosomal_zn-bd