prot_H-akashiwo_Contig1150.2.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig1150.2.1
Unique Nameprot_H-akashiwo_Contig1150.2.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length98
Homology
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BLAST of mRNA_H-akashiwo_Contig1150.2.1 vs. uniprot
Match: A0A518HQ46_9BACT (Non-specific serine/threonine protein kinase n=1 Tax=Stieleria neptunia TaxID=2527979 RepID=A0A518HQ46_9BACT)

HSP 1 Score: 51.6 bits (122), Expect = 2.020e-5
Identity = 23/58 (39.66%), Postives = 37/58 (63.79%), Query Frame = 0 
Query:   18 SRHRILRGHKFRCFDSQIDPSGQCFATASEDGTVKIWHLASGQPMAVLEHSASEVRTM 75
            +R   L GH  R F + + P+G+   T SEDG V++W++A+GQP+ VL   +S +R +
Sbjct: 1097 NRLATLVGHNDRVFAACLHPNGRTLVTGSEDGEVRLWNVATGQPLFVLRSFSSPIRQL 1154
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1150.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A518HQ46_9BACT2.020e-539.66Non-specific serine/threonine protein kinase n=1 T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 16..55
e-value: 9.0E-7
score: 38.5
IPR001680WD40 repeatPFAMPF00400WD40coord: 21..54
e-value: 7.1E-6
score: 26.7
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 23..64
score: 12.680634
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 6..97
e-value: 1.9E-12
score: 49.0
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 23..60
score: 9.757418
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 16..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1150contigH-akashiwo_Contig1150:156169..156941 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1150.2.1mRNA_H-akashiwo_Contig1150.2.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig1150 156159..157024 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig1150.2.1 ID=prot_H-akashiwo_Contig1150.2.1|Name=mRNA_H-akashiwo_Contig1150.2.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=98bp
MTEGPIFDVVCRAISDDSRHRILRGHKFRCFDSQIDPSGQCFATASEDGT
VKIWHLASGQPMAVLEHSASEVRTMFKGVWTHTPCFNPLSASFFVSL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf