prot_H-akashiwo_Contig1146.1.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-akashiwo_Contig1146.1.1
Unique Name	prot_H-akashiwo_Contig1146.1.1
Type	polypeptide
Organism	Heterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length	254

Homology

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BLAST of mRNA_H-akashiwo_Contig1146.1.1 vs. uniprot
Match: A0A7S2XYF3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYF3_9STRA)

HSP 1 Score: 126 bits (317), Expect = 1.850e-31
Identity = 65/85 (76.47%), Postives = 71/85 (83.53%), Query Frame = 0

Query:  170 KTLEEPTGANLFIYHLPHDLTDADLATAFAPFGNVPTVPFGAAQVYVDKGTGQSKGFGFVSYDGPASADRAIEAMNGFQIGSKRL 254
            + LE P GANLFIYHLPHDLTDADLATAF+PFGNV +     A+VYVDK TGQSKGFGFVSYD P+SA+ AI  MNGFQIGSKRL
Sbjct:   12 RPLEGPPGANLFIYHLPHDLTDADLATAFSPFGNVIS-----AKVYVDKNTGQSKGFGFVSYDMPSSAETAISNMNGFQIGSKRL 91

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BLAST of mRNA_H-akashiwo_Contig1146.1.1 vs. uniprot
Match: A0A7S2A4L6_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A4L6_TRICV)

HSP 1 Score: 120 bits (302), Expect = 5.560e-31
Identity = 62/85 (72.94%), Postives = 69/85 (81.18%), Query Frame = 0

Query:  170 KTLEEPTGANLFIYHLPHDLTDADLATAFAPFGNVPTVPFGAAQVYVDKGTGQSKGFGFVSYDGPASADRAIEAMNGFQIGSKRL 254
            + LE P GANLFIYHLPHDLTDADLATAF PFGNV +     A+VYVD+ TG+SKGFGFVSYD   SA+ AIE MNGFQIG+KRL
Sbjct:   31 RPLEGPAGANLFIYHLPHDLTDADLATAFTPFGNVIS-----AKVYVDRITGESKGFGFVSYDSVVSAELAIEQMNGFQIGNKRL 110

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BLAST of mRNA_H-akashiwo_Contig1146.1.1 vs. uniprot
Match: A0A7S2EVP2_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EVP2_TRICV)

HSP 1 Score: 120 bits (301), Expect = 6.980e-31
Identity = 61/82 (74.39%), Postives = 67/82 (81.71%), Query Frame = 0

Query:  173 EEPTGANLFIYHLPHDLTDADLATAFAPFGNVPTVPFGAAQVYVDKGTGQSKGFGFVSYDGPASADRAIEAMNGFQIGSKRL 254
            E P GANLFIYHLPHDLTDADLATAF PFGNV +     A+VYVD+ TG+SKGFGFVSYD   SA+ AIE MNGFQIG+KRL
Sbjct:   52 EGPAGANLFIYHLPHDLTDADLATAFDPFGNVIS-----AKVYVDRNTGESKGFGFVSYDSVVSAEHAIEQMNGFQIGNKRL 128

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BLAST of mRNA_H-akashiwo_Contig1146.1.1 vs. uniprot
Match: A0A7S1E386_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E386_9STRA)

HSP 1 Score: 119 bits (299), Expect = 2.150e-30
Identity = 60/82 (73.17%), Postives = 67/82 (81.71%), Query Frame = 0

Query:  173 EEPTGANLFIYHLPHDLTDADLATAFAPFGNVPTVPFGAAQVYVDKGTGQSKGFGFVSYDGPASADRAIEAMNGFQIGSKRL 254
            E P GANLF+YHLPHDLTDADLATAF PFGNV +     A+VYVD+ TG+SKGFGFVSYD   SA+ AIE MNGFQIG+KRL
Sbjct:   42 EGPAGANLFVYHLPHDLTDADLATAFNPFGNVIS-----AKVYVDRNTGESKGFGFVSYDSVVSAESAIEQMNGFQIGNKRL 118

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BLAST of mRNA_H-akashiwo_Contig1146.1.1 vs. uniprot
Match: A0A6T7KDJ9_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A6T7KDJ9_9STRA)

HSP 1 Score: 119 bits (297), Expect = 3.490e-30
Identity = 61/82 (74.39%), Postives = 68/82 (82.93%), Query Frame = 0

Query:  173 EEPTGANLFIYHLPHDLTDADLATAFAPFGNVPTVPFGAAQVYVDKGTGQSKGFGFVSYDGPASADRAIEAMNGFQIGSKRL 254
            E P GANLFIYHLPHDLTDADLATAF PFGNV +     A+VYVD+ TG+SKGFGFVSYD   SA++AIE MNGFQIG+KRL
Sbjct:   40 EGPPGANLFIYHLPHDLTDADLATAFNPFGNVIS-----AKVYVDRFTGESKGFGFVSYDSGTSANQAIEQMNGFQIGNKRL 116

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BLAST of mRNA_H-akashiwo_Contig1146.1.1 vs. uniprot
Match: W7U5L7_9STRA (Rna binding protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U5L7_9STRA)

HSP 1 Score: 125 bits (313), Expect = 4.150e-29
Identity = 63/86 (73.26%), Postives = 71/86 (82.56%), Query Frame = 0

Query:  169 AKTLEEPTGANLFIYHLPHDLTDADLATAFAPFGNVPTVPFGAAQVYVDKGTGQSKGFGFVSYDGPASADRAIEAMNGFQIGSKRL 254
            +K LE P GANLFIYHLPHDLTDADLATAF PFG V +     A+VYVDK +G+SKGFGFVSYD P +AD AI+AMNGFQIG+KRL
Sbjct:  429 SKPLEGPAGANLFIYHLPHDLTDADLATAFNPFGTVVS-----AKVYVDKNSGESKGFGFVSYDSPLAADAAIKAMNGFQIGTKRL 509

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BLAST of mRNA_H-akashiwo_Contig1146.1.1 vs. uniprot
Match: A0A8K1CEG0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CEG0_PYTOL)

HSP 1 Score: 123 bits (308), Expect = 9.210e-29
Identity = 63/83 (75.90%), Postives = 70/83 (84.34%), Query Frame = 0

Query:  172 LEEPTGANLFIYHLPHDLTDADLATAFAPFGNVPTVPFGAAQVYVDKGTGQSKGFGFVSYDGPASADRAIEAMNGFQIGSKRL 254
            LE P+GANLFIYHLPHDLTDADLATAFAPFG V +     A+VY+DK TG+SKGFGFVSYD P +AD AI +MNGFQIGSKRL
Sbjct:  349 LEGPSGANLFIYHLPHDLTDADLATAFAPFGTVIS-----AKVYMDKITGESKGFGFVSYDSPDAADAAIASMNGFQIGSKRL 426

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BLAST of mRNA_H-akashiwo_Contig1146.1.1 vs. uniprot
Match: A0A7S2W828_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W828_9STRA)

HSP 1 Score: 121 bits (303), Expect = 1.130e-28
Identity = 63/82 (76.83%), Postives = 67/82 (81.71%), Query Frame = 0

Query:  173 EEPTGANLFIYHLPHDLTDADLATAFAPFGNVPTVPFGAAQVYVDKGTGQSKGFGFVSYDGPASADRAIEAMNGFQIGSKRL 254
            E P GANLFIYHLPHDLTDADLATAF PFGNV +     A+VYVDK TG+SKGFGFVSYD   SA+ AIE MNGFQIGSKRL
Sbjct:  211 EGPAGANLFIYHLPHDLTDADLATAFNPFGNVIS-----AKVYVDKYTGESKGFGFVSYDSVISAEHAIEQMNGFQIGSKRL 287

[Close]

BLAST of mRNA_H-akashiwo_Contig1146.1.1 vs. uniprot
Match: A0A7S1BYN5_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BYN5_9STRA)

HSP 1 Score: 123 bits (309), Expect = 1.630e-28
Identity = 65/82 (79.27%), Postives = 68/82 (82.93%), Query Frame = 0

Query:  173 EEPTGANLFIYHLPHDLTDADLATAFAPFGNVPTVPFGAAQVYVDKGTGQSKGFGFVSYDGPASADRAIEAMNGFQIGSKRL 254
            E P GANLFIYHLPHDLTDADLATAFAPFGNV +     A+VYVDK TG+SKGFGFVSYD   SAD AIE MNGFQIGSKRL
Sbjct:  453 EGPPGANLFIYHLPHDLTDADLATAFAPFGNVIS-----AKVYVDKFTGESKGFGFVSYDVVTSADAAIEQMNGFQIGSKRL 529

[Close]

BLAST of mRNA_H-akashiwo_Contig1146.1.1 vs. uniprot
Match: A0A6G0W9N9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W9N9_9STRA)

HSP 1 Score: 121 bits (304), Expect = 1.750e-28
Identity = 62/83 (74.70%), Postives = 68/83 (81.93%), Query Frame = 0

Query:  172 LEEPTGANLFIYHLPHDLTDADLATAFAPFGNVPTVPFGAAQVYVDKGTGQSKGFGFVSYDGPASADRAIEAMNGFQIGSKRL 254
            LE P GANLFIYHLPHDLTDADLATAFAPFG V +     A+VY+DK TG+SKGFGFVSYD   +AD AI +MNGFQIGSKRL
Sbjct:  317 LEGPVGANLFIYHLPHDLTDADLATAFAPFGTVIS-----AKVYMDKNTGESKGFGFVSYDSAQAADAAIASMNGFQIGSKRL 394

The following BLAST results are available for this feature:

BLAST of mRNA_H-akashiwo_Contig1146.1.1 vs. uniprot

BLAST of mRNA_H-akashiwo_Contig1146.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A7S2XYF3_9STRA	1.850e-31	76.47	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A7S2A4L6_TRICV	5.560e-31	72.94	Hypothetical protein (Fragment) n=1 Tax=Trieres ch...	[more]
A0A7S2EVP2_TRICV	6.980e-31	74.39	Hypothetical protein (Fragment) n=1 Tax=Trieres ch...	[more]
A0A7S1E386_9STRA	2.150e-30	73.17	Hypothetical protein n=1 Tax=Thalassionema nitzsch...	[more]
A0A6T7KDJ9_9STRA	3.490e-30	74.39	Hypothetical protein n=1 Tax=Attheya septentrional...	[more]
W7U5L7_9STRA	4.150e-29	73.26	Rna binding protein n=3 Tax=Monodopsidaceae TaxID=...	[more]
A0A8K1CEG0_PYTOL	9.210e-29	75.90	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A7S2W828_9STRA	1.130e-28	76.83	Hypothetical protein n=1 Tax=Eucampia antarctica T...	[more]
A0A7S1BYN5_9STRA	1.630e-28	79.27	Hypothetical protein n=1 Tax=Corethron hystrix Tax...	[more]
A0A6G0W9N9_9STRA	1.750e-28	74.70	Uncharacterized protein n=1 Tax=Aphanomyces euteic...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 179..253 e-value: 6.4E-11 score: 52.3
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 180..254 e-value: 5.0E-15 score: 55.1
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 178..254 score: 15.886138
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 150..254 e-value: 5.3E-22 score: 80.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..92
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..125
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 145..171
None	No IPR available	PANTHER	PTHR24012	RNA BINDING PROTEIN	coord: 138..250
None	No IPR available	PANTHER	PTHR24012:SF716	CUGBP ELAV-LIKE FAMILY MEMBER 6	coord: 138..250
None	No IPR available	CDD	cd12362	RRM3_CELF1-6	coord: 180..254 e-value: 2.18173E-35 score: 119.279
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 172..254

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-akashiwo_Contig1146	contig	H-akashiwo_Contig1146:61821..65326 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Heterosigma akashiwo CCMP452 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-akashiwo_Contig1146.1.1	mRNA_H-akashiwo_Contig1146.1.1	Heterosigma akashiwo CCMP452	mRNA	H-akashiwo_Contig1146 48273..65326 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-akashiwo_Contig1146.1.1 ID=prot_H-akashiwo_Contig1146.1.1|Name=mRNA_H-akashiwo_Contig1146.1.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=254bp
MEGGPALVKFADNKRGGERGVGGVGGGMALGAAAAAAHRGYYYGGGGGGG
GGGGPGYAGAPAAPGRRGYDSACSTQELAALQGQSRSQQAQGLLPPAPPP
PLARQAAAGGGGGPERGRQRCGAAAGGTVHPAGVLAGAGARGRAAGPHYA
PGASGARRRRRAAGGGGAAKTLEEPTGANLFIYHLPHDLTDADLATAFAP
FGNVPTVPFGAAQVYVDKGTGQSKGFGFVSYDGPASADRAIEAMNGFQIG
SKRL

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000504	RRM_dom
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR035979	RBD_domain_sf